FFCP PHASE1:Hg19::chr3:42132810..42132863,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:42132810..42132863,+ to FFCP PHASE1:Hg19::chr3:42132810..42132863,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22906 | |EntrezGene=22906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29947 | |HGNC=29947 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3G5 | |UniProt=B7Z3G5 | ||
|association_with_transcript=0bp_to_ENST00000543338_5end | |||
|cluster_id=chr3:42132810..42132863,+ | |||
|description=CAGE_peak_4_at_TRAK1_5end | |||
|id=chr3:42132810..42132863,+ | |||
|ontology_enrichment_celltype=CL:0002159!8.93e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;3.50e-09;14!CL:0000622;2.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.38e-09,14;CL:0000622,2.88e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.11e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-38!115;UBERON:0001049!4.00e-26!57;UBERON:0005068!4.00e-26!57;UBERON:0006241!4.00e-26!57;UBERON:0007135!4.00e-26!57;UBERON:0004121!4.86e-25!169;UBERON:0000153!5.28e-24!129;UBERON:0007811!5.28e-24!129;UBERON:0000924!1.48e-23!173;UBERON:0006601!1.48e-23!173;UBERON:0000033!4.52e-23!123;UBERON:0003075!3.77e-22!86;UBERON:0007284!3.77e-22!86;UBERON:0002616!1.26e-21!59;UBERON:0005743!2.01e-20!86;UBERON:0002346!4.82e-20!90;UBERON:0000955!1.14e-19!69;UBERON:0006238!1.14e-19!69;UBERON:0002780!1.24e-19!41;UBERON:0001890!1.24e-19!41;UBERON:0006240!1.24e-19!41;UBERON:0001017!4.39e-19!82;UBERON:0003080!8.50e-19!42;UBERON:0000073!3.34e-18!94;UBERON:0001016!3.34e-18!94;UBERON:0000475!3.08e-17!365;UBERON:0002020!5.15e-15!34;UBERON:0003528!5.15e-15!34;UBERON:0001893!8.50e-15!34;UBERON:0002791!2.97e-14!33;UBERON:0003056!8.07e-14!61;UBERON:0001869!2.00e-13!32;UBERON:0002619!1.24e-10!22;UBERON:0003102!2.35e-10!95;UBERON:0000956!3.45e-09!25;UBERON:0000203!3.45e-09!25;UBERON:0001950!3.61e-09!20;UBERON:0003076!1.62e-08!15;UBERON:0003057!1.62e-08!15;UBERON:0004111!3.10e-08!241;UBERON:0002420!4.79e-08!9;UBERON:0007245!4.79e-08!9;UBERON:0010009!4.79e-08!9;UBERON:0010011!4.79e-08!9;UBERON:0000454!4.79e-08!9;UBERON:0002308!6.63e-08!9;UBERON:0000125!6.63e-08!9;UBERON:0000483!1.91e-07!309;UBERON:0000062!2.71e-07!511;UBERON:0000119!4.49e-07!312;UBERON:0004733!8.13e-07!12;UBERON:0002028!8.13e-07!12;UBERON:0007277!8.13e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.93e-18;41!UBERON:0001890;2.93e-18;41!UBERON:0000073;6.88e-18;53!UBERON:0002616;6.88e-18;53!UBERON:0001893;1.25e-16;34!UBERON:0003528;1.86e-16;34!UBERON:0002020;1.86e-16;34!UBERON:0002791;9.09e-16;32!UBERON:0001869;1.50e-15;32!UBERON:0002619;3.20e-14;22!UBERON:0001950;2.96e-12;20!UBERON:0000956;8.20e-12;25!UBERON:0000203;8.20e-12;25!UBERON:0007023;8.73e-12;114!UBERON:0000955;1.11e-11;68!UBERON:0001017;4.09e-11;75!UBERON:0002420;4.38e-10;9!UBERON:0007245;4.38e-10;9!UBERON:0010009;4.38e-10;9!UBERON:0010011;4.38e-10;9!UBERON:0000454;4.38e-10;9!UBERON:0000125;6.52e-10;9!UBERON:0002308;6.52e-10;9!UBERON:0001894;3.44e-08;7!UBERON:0009663;6.37e-08;7!UBERON:0001016;9.53e-08;83!UBERON:0002298;2.01e-07;6!UBERON:0000200;6.41e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.50e-40,114;UBERON:0001049,3.09e-32,56;UBERON:0005068,3.09e-32,56;UBERON:0006241,3.09e-32,56;UBERON:0007135,3.09e-32,56;UBERON:0000073,4.30e-31,53;UBERON:0002616,4.30e-31,53;UBERON:0010371,1.75e-30,104;UBERON:0002780,1.04e-25,41;UBERON:0001890,1.04e-25,41;UBERON:0003080,1.04e-25,41;UBERON:0006240,1.04e-25,41;UBERON:0000955,8.30e-25,68;UBERON:0006238,8.30e-25,68;UBERON:0004121,1.43e-23,171;UBERON:0000924,1.43e-23,171;UBERON:0006601,1.43e-23,171;UBERON:0003075,2.34e-23,82;UBERON:0007284,2.34e-23,82;UBERON:0001017,1.39e-22,81;UBERON:0002346,2.01e-21,86;UBERON:0003528,1.35e-19,34;UBERON:0002020,1.35e-19,34;UBERON:0001893,2.62e-19,34;UBERON:0010314,5.41e-19,132;UBERON:0001016,1.34e-18,89;UBERON:0002791,1.03e-17,32;UBERON:0003056,1.12e-17,61;UBERON:0001869,1.72e-17,32;UBERON:0002619,2.65e-14,22;UBERON:0001950,2.42e-12,20;UBERON:0000956,6.99e-12,25;UBERON:0000203,6.99e-12,25;UBERON:0003102,1.46e-11,99;UBERON:0002420,4.17e-10,9;UBERON:0007245,4.17e-10,9;UBERON:0010009,4.17e-10,9;UBERON:0010011,4.17e-10,9;UBERON:0000454,4.17e-10,9;UBERON:0000125,6.39e-10,9;UBERON:0002308,6.39e-10,9;UBERON:0011216,2.27e-09,223;UBERON:0004111,4.96e-09,240;UBERON:0000483,2.47e-08,306;UBERON:0001894,3.22e-08,7;UBERON:0006222,3.22e-08,7;UBERON:0000119,5.08e-08,309;UBERON:0009663,6.60e-08,7;UBERON:0003076,9.52e-08,15;UBERON:0003057,9.52e-08,15;UBERON:0002097,1.17e-07,41;UBERON:0002298,1.77e-07,6;UBERON:0000200,5.44e-07,6;UBERON:0000166,6.16e-07,22 | |||
|phase1_expression=1.63510541343501,1.71280419112787,0.986680828671798,0,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,5.51652734687356,6.6265302131215,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.50668955317945,0.289693037921647,0,0.486634870302636,0,0,0,2.03017567021455,4.37154345951051,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,3.48875241714027,1.49091585508596,1.2663051166458,3.44263870114369,0.573673241497627,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,1.22595118319608,0.45071417671979,0.226864366320042,2.51145489964407,2.13557388818567,2.96704661623387,4.80145753735044,3.60683852334536,5.15281080091258,5.02515512095292,11.6455669246474,6.62571635096151,4.03894038790583,4.23429533754577,1.45481451136931,2.84007674013291,2.11579406278045,0.169560592310488,22.0317372606158,13.9100521501326,18.3554941048962,0,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8158119336717,5.62008766288098,10.4550131308096,10.2773174125968,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,17.8094284574876,24.1894264606358,23.3928910449938,4.47792613514241,3.77824120068151,4.60059214998253,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,1.50171528921959,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,5.22920075160176,1.09970290300263,0,0,0,0.239624855491583,2.29723871668228,0,0.868687840005475,0,2.14873155887875,0,0,0.431255149719035,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,4.78332981520856,3.21172179834891,1.10391690523754,2.34282829985426,0.902838299183157,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,1.48864684691266,4.75732117192994,3.08726103876381,1.40953064181271,2.55853624533352,0.482561763430822,1.48418066444991,0.462629081407967,0.177561725313127,0.328508624055237,0,0.232420756919918,0,13.2334270400168,2.02578175658972,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,0.328014645699706,0.325378394664303,0,0.183138929636687,0.165018999841176,10.3367796839311,16.9015663969496,0,0.193341436584244,0,0,0,0,0,0,0.445160178233687,2.47927373041467,0.384380134730212,6.12541019974004,1.0115778085555,0,0.62962469366128,0,1.54016790088044,2.12922412126809,0.869932992075073,0.55597265731176,1.00187420719394,0,0,1.5250415513906,0,0,0.636406495851874,0,0,0,0,2.22400729730648,0,0.421258456238981,0,2.68084838594413,1.05650146756755,0.136499911407986,0,0,0,0,1.75380354101505,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,1.05553817648832,3.62224382255892,0,0,3.1753297199419,10.0545341330368,4.3556393944529,0.564862804660675,3.44404298136984,10.1082885400575,2.66058092122005,0,0,0,0,0,0.411362273086194,0,0,0,0,0,3.43056302373444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0.95497793895076,5.04839957415486,0.307160702099232,10.9356241254293,10.97221448002,0,0,0,0.796991953004279,0.828851746593443,0,1.53403023753232,0,0.311039587661807,0,0,0,0.986434056369336,0,0,5.81599647657131,4.08179631912146,0,0,0.0874599999961957,0,0.682760689712998,0,0,0,0,0.173624994933292,5.31444831488303,3.85908603601305,6.10326945268333,5.86070077635491,2.06883333267483,2.63262476584767,0,6.55291598109435,1.46205491157214,0.683652335082007,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,6.13350310124161,1.60515529459758,4.45102446878144,0,0,0,1.57833761139756,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,4.11568069140386,0,0.34945333648406,0,0.0967563312890851,0,0,6.4982641047241,0,3.84167259326905,0,0,4.24182332904387,0,0,1.70762395791482,0,0,0,0,0,0,1.17847017308398,0,0,0.203996435272644,0,9.00630433064684,6.16074205013969,0,0.429765441419957,0,3.90995361781156,4.35404805622199,0.717873024576814,2.79550600698588,10.3014251552777,6.69514372325618,0,1.08089965062721,0,0,0,0,0,0,7.15706720828373,14.437561047827,0,0,0,0.449947783103001,17.7974449548328,5.89270699582839,1.67717343799633,0.0788057072991982,0.104909176269996,0,0,0,1.42939065274673,1.98627591109629,0,1.62899880526114,0,1.95952416065645,0,0,0.511164065356265,0,0,0,9.17908990167009,6.74386268887719,0,0,0.320362237703084,0.157204305099666,2.07119527673598,0,0,0,1.91502377331055,2.72008901684737,4.7631079864313,4.59518365145192,5.57383472206668,0,7.08854543973589,6.83347083450994,6.25954653532499,14.9086390879419,7.54317550450596,8.32091799414538,0,0.999843263696853,0,5.70930667089935,0,0,0,1.64180283175561,0.701139929541673,0.554805861502613,0.568209015825267,1.76097531226803,0.889811221596536,0.228840068396924,0.453692771289717,3.26418121223839,1.33069634990671,0.477890301491107,0,0.931577741257556,0,0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|phase1_expression=1.63510541343501,1.71280419112787,0.986680828671798,0,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,5.51652734687356,6.6265302131215,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.50668955317945,0.289693037921647,0,0.486634870302636,0,0,0,2.03017567021455,4.37154345951051,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,3.48875241714027,1.49091585508596,1.2663051166458,3.44263870114369,0.573673241497627,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,1.22595118319608,0.45071417671979,0.226864366320042,2.51145489964407,2.13557388818567,2.96704661623387,4.80145753735044,3.60683852334536,5.15281080091258,5.02515512095292,11.6455669246474,6.62571635096151,4.03894038790583,4.23429533754577,1.45481451136931,2.84007674013291,2.11579406278045,0.169560592310488,22.0317372606158,13.9100521501326,18.3554941048962,0,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8158119336717,5.62008766288098,10.4550131308096,10.2773174125968,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,17.8094284574876,24.1894264606358,23.3928910449938,4.47792613514241,3.77824120068151,4.60059214998253,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,1.50171528921959,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,5.22920075160176,1.09970290300263,0,0,0,0.239624855491583,2.29723871668228,0,0.868687840005475,0,2.14873155887875,0,0,0.431255149719035,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,4.78332981520856,3.21172179834891,1.10391690523754,2.34282829985426,0.902838299183157,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,1.48864684691266,4.75732117192994,3.08726103876381,1.40953064181271,2.55853624533352,0.482561763430822,1.48418066444991,0.462629081407967,0.177561725313127,0.328508624055237,0,0.232420756919918,0,13.2334270400168,2.02578175658972,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,0.328014645699706,0.325378394664303,0,0.183138929636687,0.165018999841176,10.3367796839311,16.9015663969496,0,0.193341436584244,0,0,0,0,0,0,0.445160178233687,2.47927373041467,0.384380134730212,6.12541019974004,1.0115778085555,0,0.62962469366128,0,1.54016790088044,2.12922412126809,0.869932992075073,0.55597265731176,1.00187420719394,0,0,1.5250415513906,0,0,0.636406495851874,0,0,0,0,2.22400729730648,0,0.421258456238981,0,2.68084838594413,1.05650146756755,0.136499911407986,0,0,0,0,1.75380354101505,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,1.05553817648832,3.62224382255892,0,0,3.1753297199419,10.0545341330368,4.3556393944529,0.564862804660675,3.44404298136984,10.1082885400575,2.66058092122005,0,0,0,0,0,0.411362273086194,0,0,0,0,0,3.43056302373444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0.95497793895076,5.04839957415486,0.307160702099232,10.9356241254293,10.97221448002,0,0,0,0.796991953004279,0.828851746593443,0,1.53403023753232,0,0.311039587661807,0,0,0,0.986434056369336,0,0,5.81599647657131,4.08179631912146,0,0,0.0874599999961957,0,0.682760689712998,0,0,0,0,0.173624994933292,5.31444831488303,3.85908603601305,6.10326945268333,5.86070077635491,2.06883333267483,2.63262476584767,0,6.55291598109435,1.46205491157214,0.683652335082007,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,6.13350310124161,1.60515529459758,4.45102446878144,0,0,0,1.57833761139756,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,4.11568069140386,0,0.34945333648406,0,0.0967563312890851,0,0,6.4982641047241,0,3.84167259326905,0,0,4.24182332904387,0,0,1.70762395791482,0,0,0,0,0,0,1.17847017308398,0,0,0.203996435272644,0,9.00630433064684,6.16074205013969,0,0.429765441419957,0,3.90995361781156,4.35404805622199,0.717873024576814,2.79550600698588,10.3014251552777,6.69514372325618,0,1.08089965062721,0,0,0,0,0,0,7.15706720828373,14.437561047827,0,0,0,0.449947783103001,17.7974449548328,5.89270699582839,1.67717343799633,0.0788057072991982,0.104909176269996,0,0,0,1.42939065274673,1.98627591109629,0,1.62899880526114,0,1.95952416065645,0,0,0.511164065356265,0,0,0,9.17908990167009,6.74386268887719,0,0,0.320362237703084,0.157204305099666,2.07119527673598,0,0,0,1.91502377331055,2.72008901684737,4.7631079864313,4.59518365145192,5.57383472206668,0,7.08854543973589,6.83347083450994,6.25954653532499,14.9086390879419,7.54317550450596,8.32091799414538,0,0.999843263696853,0,5.70930667089935,0,0,0,1.64180283175561,0.701139929541673,0.554805861502613,0.568209015825267,1.76097531226803,0.889811221596536,0.228840068396924,0.453692771289717,3.26418121223839,1.33069634990671,0.477890301491107,0,0.931577741257556,0,0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| ||
|short_description=p4@TRAK1 | |||
}} | }} |
Latest revision as of 05:51, 18 September 2015
Short description: | p4@TRAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRAK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000543338_5end |
EntrezGene: | TRAK1 |
HGNC: | 29947 |
UniProt: | B7Z3G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 3.38e-09 | 14 |
acinar cell | 2.88e-07 | 5 |