FFCP PHASE1:Hg19::chr21:35899113..35899128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1827 | |EntrezGene=1827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3040 | |HGNC=3040 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492600_5end | |association_with_transcript=0bp_to_ENST00000492600_5end | ||
|cluster_id=chr21:35899113..35899128,- | |||
|description=CAGE_peak_1_at_RCAN1_5end | |description=CAGE_peak_1_at_RCAN1_5end | ||
|id=chr21:35899113..35899128,- | |id=chr21:35899113..35899128,- | ||
|ontology_enrichment_celltype=CL:0000055!1.55e-28!180;CL:0000680!1.44e-12!57;CL:0000056!1.44e-12!57;CL:0000355!1.44e-12!57;CL:0000220!2.75e-12!246;CL:0000187!3.78e-12!54;CL:0000192!6.77e-12!42;CL:0000514!6.77e-12!42;CL:0002321!9.37e-12!248;CL:0000359!2.23e-11!32;CL:0000393!2.45e-11!60;CL:0000211!2.45e-11!60;CL:0000183!2.60e-10!59;CL:0000057!6.18e-10!75;CL:0000222!1.61e-09!119;CL:0000136!1.42e-07!15;CL:0000325!6.65e-07!39 | |ontology_enrichment_celltype=CL:0000055!1.55e-28!180;CL:0000680!1.44e-12!57;CL:0000056!1.44e-12!57;CL:0000355!1.44e-12!57;CL:0000220!2.75e-12!246;CL:0000187!3.78e-12!54;CL:0000192!6.77e-12!42;CL:0000514!6.77e-12!42;CL:0002321!9.37e-12!248;CL:0000359!2.23e-11!32;CL:0000393!2.45e-11!60;CL:0000211!2.45e-11!60;CL:0000183!2.60e-10!59;CL:0000057!6.18e-10!75;CL:0000222!1.61e-09!119;CL:0000136!1.42e-07!15;CL:0000325!6.65e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.62e-11;32!CL:0000192;4.73e-09;43!CL:0000187;4.99e-07;55!CL:0000134;8.03e-07;55!CL:0000048;9.56e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.01e-13,58;CL:0000056,7.01e-13,58;CL:0000355,7.01e-13,58;CL:0000187,1.86e-12,55;CL:0000192,3.42e-12,43;CL:0000514,3.42e-12,43;CL:0000359,1.73e-11,32;CL:0000393,2.14e-11,61;CL:0000211,2.14e-11,61;CL:0002321,2.72e-11,250;CL:0000057,1.40e-10,76;CL:0000222,1.63e-09,121;CL:0000136,1.21e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.73e-09;43!CL:0000355;6.88e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.15e-14!83;UBERON:0002329!2.15e-14!83;UBERON:0003077!2.15e-14!83;UBERON:0003059!2.15e-14!83;UBERON:0007282!2.15e-14!83;UBERON:0009618!2.15e-14!83;UBERON:0007285!2.15e-14!83;UBERON:0000468!1.42e-13!659;UBERON:0005256!6.43e-13!143;UBERON:0004290!7.11e-13!70;UBERON:0002100!1.16e-12!216;UBERON:0002385!2.14e-12!63;UBERON:0001015!2.14e-12!63;UBERON:0000383!2.14e-12!63;UBERON:0001134!3.17e-12!61;UBERON:0002036!3.17e-12!61;UBERON:0003082!3.17e-12!61;UBERON:0000486!4.57e-12!82;UBERON:0000467!5.17e-12!625;UBERON:0000480!1.01e-11!626;UBERON:0000475!6.89e-11!365;UBERON:0002049!3.14e-10!79;UBERON:0007798!3.14e-10!79;UBERON:0000490!5.80e-09!138;UBERON:0004872!2.54e-08!84;UBERON:0003104!3.71e-08!238;UBERON:0009142!3.71e-08!238;UBERON:0004573!4.77e-08!33;UBERON:0004571!4.77e-08!33;UBERON:0000055!4.85e-08!69;UBERON:0000481!7.54e-08!347;UBERON:0001637!8.84e-08!42;UBERON:0003509!8.84e-08!42;UBERON:0004572!8.84e-08!42;UBERON:0003914!1.35e-07!118;UBERON:0001981!2.43e-07!60;UBERON:0007500!2.43e-07!60;UBERON:0004537!2.43e-07!60;UBERON:0006965!2.43e-07!60;UBERON:0000926!3.36e-07!448;UBERON:0004120!3.36e-07!448;UBERON:0006603!3.36e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.76e-07;33!UBERON:0004571;2.76e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,4.71e-13,71;UBERON:0003059,4.71e-13,71;UBERON:0007282,4.71e-13,71;UBERON:0004290,4.71e-13,71;UBERON:0009618,4.71e-13,71;UBERON:0007524,8.24e-13,73;UBERON:0002385,1.45e-12,64;UBERON:0001015,1.45e-12,64;UBERON:0000383,1.45e-12,64;UBERON:0003077,2.04e-12,72;UBERON:0007285,2.04e-12,72;UBERON:0001134,2.17e-12,62;UBERON:0002036,2.17e-12,62;UBERON:0003082,2.17e-12,62;UBERON:0000486,2.44e-12,83;UBERON:0005256,7.39e-12,122;UBERON:0007503,1.08e-11,78;UBERON:0003104,1.66e-11,160;UBERON:0009142,1.66e-11,160;UBERON:0002100,2.08e-10,199;UBERON:0002049,7.17e-10,78;UBERON:0007798,7.17e-10,78;UBERON:0000490,8.63e-10,148;UBERON:0004573,4.04e-08,33;UBERON:0004571,4.04e-08,33;UBERON:0004872,5.00e-08,83;UBERON:0001637,7.53e-08,42;UBERON:0003509,7.53e-08,42;UBERON:0004572,7.53e-08,42;UBERON:0000055,1.00e-07,68;UBERON:0003914,2.16e-07,117;UBERON:0002204,2.17e-07,167;UBERON:0007500,5.59e-07,59;UBERON:0001981,5.59e-07,59;UBERON:0004537,5.59e-07,59;UBERON:0006965,5.59e-07,59 | |||
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| ||
|short_description=p1@RCAN1 | |short_description=p1@RCAN1 | ||
}} | }} |
Latest revision as of 06:05, 18 September 2015
Short description: | p1@RCAN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RCAN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000492600_5end |
EntrezGene: | RCAN1 |
HGNC: | 3040 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.01e-13 | 58 |
myoblast | 7.01e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.01e-13 | 58 |
muscle cell | 1.86e-12 | 55 |
smooth muscle cell | 3.42e-12 | 43 |
smooth muscle myoblast | 3.42e-12 | 43 |
vascular associated smooth muscle cell | 1.73e-11 | 32 |
electrically responsive cell | 2.14e-11 | 61 |
electrically active cell | 2.14e-11 | 61 |
embryonic cell | 2.72e-11 | 250 |
fibroblast | 1.40e-10 | 76 |
mesodermal cell | 1.63e-09 | 121 |
fat cell | 1.21e-07 | 15 |