FFCP PHASE1:Hg19::chr3:42623743..42623756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9117 | |EntrezGene=9117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16828 | |HGNC=16828 | ||
|TSSclassifier=strong | |||
|UniProt=C9J448 | |UniProt=C9J448 | ||
|association_with_transcript=62bp_to_ENST00000456515_5end | |association_with_transcript=62bp_to_ENST00000456515_5end | ||
|cluster_id=chr3:42623743..42623756,- | |||
|coexpression_cluster_id=C4328 | |||
|description=CAGE_peak_4_at_SEC22C_5end | |description=CAGE_peak_4_at_SEC22C_5end | ||
|id=chr3:42623743..42623756,- | |id=chr3:42623743..42623756,- | ||
|ontology_enrichment_celltype=CL:0000766!5.10e-23!76;CL:0000839!9.21e-23!70;CL:0000763!8.21e-22!112;CL:0000049!8.21e-22!112;CL:0000557!1.51e-21!71;CL:0000037!5.24e-20!172;CL:0000566!5.24e-20!172;CL:0000738!8.05e-20!140;CL:0002032!1.69e-19!165;CL:0000837!1.69e-19!165;CL:0002031!2.75e-19!124;CL:0002009!3.45e-19!65;CL:0000988!4.69e-19!182;CL:0002057!8.10e-19!42;CL:0000860!9.44e-19!45;CL:0002194!2.96e-18!63;CL:0000576!2.96e-18!63;CL:0000040!2.96e-18!63;CL:0000559!2.96e-18!63;CL:0002087!1.48e-15!119 | |ontology_enrichment_celltype=CL:0000766!5.10e-23!76;CL:0000839!9.21e-23!70;CL:0000763!8.21e-22!112;CL:0000049!8.21e-22!112;CL:0000557!1.51e-21!71;CL:0000037!5.24e-20!172;CL:0000566!5.24e-20!172;CL:0000738!8.05e-20!140;CL:0002032!1.69e-19!165;CL:0000837!1.69e-19!165;CL:0002031!2.75e-19!124;CL:0002009!3.45e-19!65;CL:0000988!4.69e-19!182;CL:0002057!8.10e-19!42;CL:0000860!9.44e-19!45;CL:0002194!2.96e-18!63;CL:0000576!2.96e-18!63;CL:0000040!2.96e-18!63;CL:0000559!2.96e-18!63;CL:0002087!1.48e-15!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-21;33!CL:0002057;1.66e-21;33!CL:0000473;1.55e-20;39!CL:0000234;1.55e-20;39!CL:0000766;9.26e-18;69!CL:0000576;5.47e-16;48!CL:0000763;8.92e-11;100!CL:0000624;7.74e-09;6!CL:0002087;1.28e-08;104!CL:0000097;3.36e-08;5!CL:0000738;3.69e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-37,72;CL:0000839,1.13e-35,66;CL:0000738,1.25e-34,136;CL:0000473,2.14e-34,48;CL:0000234,2.14e-34,48;CL:0000557,3.08e-34,67;CL:0000037,4.68e-34,168;CL:0000763,1.22e-33,108;CL:0000049,1.22e-33,108;CL:0000988,1.55e-33,177;CL:0002032,2.95e-33,161;CL:0000837,2.95e-33,161;CL:0002031,3.60e-33,120;CL:0000860,4.35e-31,42;CL:0002057,4.35e-31,42;CL:0002009,3.38e-29,61;CL:0002194,1.68e-27,59;CL:0000576,1.68e-27,59;CL:0000040,1.68e-27,59;CL:0000559,1.68e-27,59;CL:0002087,9.72e-27,115;CL:0002393,7.79e-09,9;CL:0002397,7.79e-09,9;CL:0000624,7.88e-09,6;CL:0000134,1.12e-08,354;CL:0000219,2.22e-08,386;CL:0000097,3.46e-08,5;CL:0002028,3.46e-08,5;CL:0002320,4.86e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.31e-23;42!CL:0000049;1.21e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-18!102;UBERON:0003061!1.27e-18!102;UBERON:0002193!2.68e-18!112;UBERON:0002371!1.49e-17!80;UBERON:0001474!7.10e-15!86;UBERON:0002405!1.20e-12!115;UBERON:0004765!4.91e-12!101;UBERON:0001434!4.91e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.97e-29,76;UBERON:0002390,2.38e-27,98;UBERON:0003061,2.38e-27,98;UBERON:0001474,7.89e-26,82;UBERON:0002193,7.10e-25,108;UBERON:0004765,2.26e-24,90;UBERON:0002405,6.02e-24,93;UBERON:0001434,3.49e-20,100;UBERON:0003081,1.90e-09,203;UBERON:0002204,3.18e-09,167;UBERON:0002384,7.54e-08,371 | |||
|phase1_expression=1.63510541343501,1.2846031433459,1.12763523276777,0,0,0.872338524100369,0,1.89515962028049,1.04474251279935,0.245733936501509,0,0.218441372130172,1.05506791291381,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0.458480434487708,0.328402357799783,0.0787107813136792,8.65401409067589,8.06041736004147,3.09632246632152,0,0.30120591877825,0,0.92960640696362,0.142169232487422,0.293600439334847,2.21598163412751,1.20326668482085,1.95309783644267,0.447830948479849,0.647787332037959,0.515151135268373,2.76256653681173,1.13362783106643,1.4555043671269,2.32429036905685,4.11167888021826,3.40677007984614,2.01384674625505,3.58624989140741,3.31075121844019,1.37898272294647,3.22742341791913,4.06279459783025,3.9530891303947,4.36649840092553,3.59557575112135,2.14258724659632,4.49300637906531,1.27867425159808,1.64925650093358,1.99463657621632,0.426224750532694,1.16083695451434,1.70215567407342,2.4912889959823,3.26623264833766,2.60741459210101,3.04064382587163,2.42159801053347,2.20966581592539,2.84816148696796,2.11255286311942,2.33864729961548,1.46761051855863,1.34794357375794,0.750884464207532,0.32145117339416,5.70025487482497,4.77400025277816,1.64397738388171,0,0,0,0,0,0,0,0,11.384259382189,8.22132065119314,8.79228424688026,5.28685314316103,1.68152568894461,2.37045676297569,10.622327586147,7.8602152549833,12.7472929379696,0.501559486172034,5.54067853277104,5.6813736688168,7.79306913631645,1.44833593950726,6.77593587192126,4.2091439970888,3.24964636518019,0.768547918354051,1.04047478047903,0.986627427622057,1.38175008892924,0.869409257205157,4.44859689486181,3.74557159325598,3.1360657141493,0.566546713487831,6.89796888483458,7.55980380061786,4.30133476433155,0.318565414324097,0,0,0.451725357233318,0,0,0.710331756132051,0,8.87069670188823,9.09296665663925,6.22744936696036,0,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0.221729397462564,0.175669571386252,0.392937226493138,0.728590576585084,0.370784442784429,3.24547393654683,0.696518949197069,1.72845348674525,0.715471872916026,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0,1.55050055501597,0.71153252537342,1.00416183829401,0.805658634218294,0.760272105718513,0.24406205754817,0.735326160691737,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,3.9534125230819,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.573673241497627,0.709336764396714,0.560677600142307,0,0.74000264525148,0.622422070799533,0,0.163461903113459,0,0,0.234321431833797,0,1.1409436430889,0.298897361103602,0.352303495931295,0.161872944368132,0,0.61246251376468,0,0.309977343527296,3.56400857184616,0,0,0,0.505008341862199,0,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.37223371266318,0.168776332241266,0,0,0,0.161646056818812,0,0.302256294682921,0.508681776931463,1.54608682530637,1.36373060295417,2.29443676311203,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,1.65629520055781,0.674338760312407,1.20505514941741,1.43382164552112,0.653638332277218,1.18635309555548,2.56179485504312,1.56977172100277,1.92373578473195,0,0,0.4115740113314,0,0,0,1.18157981336281,0.882926198829301,0.245976877086227,0.171567810298526,0.768251997860379,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0.761016608938393,0,0,1.23108503043699,6.78612368903789,2.37809859661965,5.62403003920662,0.671928512795438,1.55952606966625,0.0895585227028483,0.581267877027924,0,23.1551721811093,23.3328350135049,11.1957182392017,13.5472756211944,16.7902436457085,9.016700989488,4.96584953225761,7.03304683260282,0,4.31875469353959,7.20823338825402,5.71652865261156,0.336393253036082,0,0.07333828582095,0.646358578788889,0,0,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,0,0,0,0,0,0.602878754119172,0.871533458600294,0.499864955910285,2.43247561282381,0,2.10833939483032,0.479249710983165,0,0,1.15825045334063,0.61642896765115,0,0.896681151948218,7.68419964787516,8.40947541952118,7.05886699538616,0,0,0.773288812777695,0,0.637938751653163,2.99602809578873,0,2.48649308061621,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0.601892199455438,0,3.10419213877515,0,0.184369168541703,0.60818530127658,0.391602314925481,0,3.10152039184331,2.5885704098234,3.20182673410333,6.97193414326397,0,0,0.992431231275107,0.306923946576125,0.561320188866147,1.92208723883551,1.02341449813341,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.348631135379878,0.604297247958111,1.00253235151642,0.736647911487171,0.459257792658427,0.364182336013434,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,28.9423037172634,35.0323504373367,0,0,0.325378394664303,0.9273691048295,0,0,0,0.650060246036521,0,0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|short_description=p4@SEC22C | |short_description=p4@SEC22C | ||
}} | }} |
Latest revision as of 06:14, 18 September 2015
Short description: | p4@SEC22C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC22C_5end |
Coexpression cluster: | C4328_Reticulocytes_Mast_small_Melanocyte_CD4_CD19_Macrophage |
Association with transcript: | 62bp_to_ENST00000456515_5end |
EntrezGene: | SEC22C |
HGNC: | 16828 |
UniProt: | C9J448 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.97e-29 | 76 |
hematopoietic system | 2.38e-27 | 98 |
blood island | 2.38e-27 | 98 |
bone element | 7.89e-26 | 82 |
hemolymphoid system | 7.10e-25 | 108 |
skeletal element | 2.26e-24 | 90 |
immune system | 6.02e-24 | 93 |
skeletal system | 3.49e-20 | 100 |
lateral plate mesoderm | 1.90e-09 | 203 |
musculoskeletal system | 3.18e-09 | 167 |
connective tissue | 7.54e-08 | 371 |