FFCP PHASE1:Hg19::chr11:47788944..47788957,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:47788944..47788957,-
|short_description=p5@FNBP4
|description=CAGE_peak_5_at_FNBP4_5end
|association_with_transcript=35bp_to_ENST00000540172,NM_015308,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23360 | |EntrezGene=23360 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19752 | |HGNC=19752 | ||
|UniProt=F5GXL1, | |TSSclassifier=strong | ||
|UniProt=F5GXL1,B3KNP0,Q8N3X1 | |||
|association_with_transcript=35bp_to_ENST00000540172,NM_015308,uc001ngl.2,uc009ylv.2_5end | |||
|cluster_id=chr11:47788944..47788957,- | |||
|description=CAGE_peak_5_at_FNBP4_5end | |||
|id=chr11:47788944..47788957,- | |||
|ontology_enrichment_celltype=CL:0000838!8.82e-15!52;CL:0000542!2.91e-14!53;CL:0000051!2.91e-14!53;CL:0000037!1.86e-13!172;CL:0000566!1.86e-13!172;CL:0000738!1.09e-12!140;CL:0002031!1.10e-12!124;CL:0000988!2.91e-12!182;CL:0002087!4.36e-12!119;CL:0002032!4.48e-11!165;CL:0000837!4.48e-11!165;CL:0000084!5.35e-08!25;CL:0000827!5.35e-08!25;CL:0000791!3.92e-07!18;CL:0000789!3.92e-07!18;CL:0002420!3.92e-07!18;CL:0002419!3.92e-07!18;CL:0000790!3.92e-07!18;CL:0000236!5.65e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;8.13e-09;53!CL:0000791;6.57e-08;18!CL:0000789;6.57e-08;18!CL:0002419;6.57e-08;18!CL:0000084;1.92e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.76e-15,136;CL:0000838,6.89e-14,52;CL:0002087,8.66e-14,115;CL:0002031,1.27e-13,120;CL:0000542,1.96e-13,53;CL:0000051,1.96e-13,53;CL:0000037,8.22e-13,168;CL:0000988,7.06e-12,177;CL:0002032,1.42e-09,161;CL:0000837,1.42e-09,161;CL:0000791,7.74e-08,18;CL:0000789,7.74e-08,18;CL:0002420,7.74e-08,18;CL:0002419,7.74e-08,18;CL:0000790,7.74e-08,18;CL:0000084,1.95e-07,25;CL:0000827,1.95e-07,25;CL:0000236,2.43e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;8.13e-09;53!CL:0000790;6.57e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.57e-13!115;UBERON:0001049!1.20e-11!57;UBERON:0005068!1.20e-11!57;UBERON:0006241!1.20e-11!57;UBERON:0007135!1.20e-11!57;UBERON:0003080!5.92e-10!42;UBERON:0002616!6.15e-10!59;UBERON:0002780!1.61e-09!41;UBERON:0001890!1.61e-09!41;UBERON:0006240!1.61e-09!41;UBERON:0000073!6.28e-09!94;UBERON:0001016!6.28e-09!94;UBERON:0000955!8.49e-09!69;UBERON:0006238!8.49e-09!69;UBERON:0002020!8.91e-09!34;UBERON:0003528!8.91e-09!34;UBERON:0001893!1.01e-08!34;UBERON:0001869!2.05e-08!32;UBERON:0002791!2.57e-08!33;UBERON:0001017!2.64e-08!82;UBERON:0002619!8.69e-08!22;UBERON:0005743!2.41e-07!86;UBERON:0001950!3.09e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.03e-12;22!UBERON:0001950;1.00e-11;20!UBERON:0001893;7.27e-11;34!UBERON:0003528;7.67e-11;34!UBERON:0002020;7.67e-11;34!UBERON:0001869;1.04e-10;32!UBERON:0000956;8.02e-10;25!UBERON:0000203;8.02e-10;25!UBERON:0002791;8.16e-10;32!UBERON:0002780;4.89e-09;41!UBERON:0001890;4.89e-09;41!UBERON:0000073;1.00e-08;53!UBERON:0002616;1.00e-08;53!UBERON:0000200;8.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.16e-14,53;UBERON:0002616,7.16e-14,53;UBERON:0001049,1.11e-13,56;UBERON:0005068,1.11e-13,56;UBERON:0006241,1.11e-13,56;UBERON:0007135,1.11e-13,56;UBERON:0002780,1.66e-12,41;UBERON:0001890,1.66e-12,41;UBERON:0003080,1.66e-12,41;UBERON:0006240,1.66e-12,41;UBERON:0001869,2.53e-12,32;UBERON:0003528,2.93e-12,34;UBERON:0002020,2.93e-12,34;UBERON:0001893,3.64e-12,34;UBERON:0002619,7.18e-12,22;UBERON:0001950,7.97e-12,20;UBERON:0002791,4.70e-11,32;UBERON:0001016,1.31e-10,89;UBERON:0000956,7.27e-10,25;UBERON:0000203,7.27e-10,25;UBERON:0007023,9.77e-10,114;UBERON:0001017,2.09e-09,81;UBERON:0000955,4.28e-09,68;UBERON:0006238,4.28e-09,68;UBERON:0002346,1.05e-08,86;UBERON:0003075,4.77e-08,82;UBERON:0007284,4.77e-08,82;UBERON:0003056,2.94e-07,61;UBERON:0000200,9.70e-07,6 | |||
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| ||
|short_description=p5@FNBP4 | |||
}} | }} |
Latest revision as of 06:25, 18 September 2015
Short description: | p5@FNBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FNBP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000540172, NM_015308, uc001ngl.2, uc009ylv.2_5end |
EntrezGene: | FNBP4 |
HGNC: | 19752 |
UniProt: | F5GXL1B3KNP0Q8N3X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.76e-15 | 136 |
lymphoid lineage restricted progenitor cell | 6.89e-14 | 52 |
nongranular leukocyte | 8.66e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.27e-13 | 120 |
lymphocyte | 1.96e-13 | 53 |
common lymphoid progenitor | 1.96e-13 | 53 |
hematopoietic stem cell | 8.22e-13 | 168 |
hematopoietic cell | 7.06e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.42e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-09 | 161 |
mature alpha-beta T cell | 7.74e-08 | 18 |
alpha-beta T cell | 7.74e-08 | 18 |
immature T cell | 7.74e-08 | 18 |
mature T cell | 7.74e-08 | 18 |
immature alpha-beta T cell | 7.74e-08 | 18 |
T cell | 1.95e-07 | 25 |
pro-T cell | 1.95e-07 | 25 |
B cell | 2.43e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.16e-14 | 53 |
regional part of brain | 7.16e-14 | 53 |
neural tube | 1.11e-13 | 56 |
neural rod | 1.11e-13 | 56 |
future spinal cord | 1.11e-13 | 56 |
neural keel | 1.11e-13 | 56 |
regional part of forebrain | 1.66e-12 | 41 |
forebrain | 1.66e-12 | 41 |
anterior neural tube | 1.66e-12 | 41 |
future forebrain | 1.66e-12 | 41 |
cerebral hemisphere | 2.53e-12 | 32 |
brain grey matter | 2.93e-12 | 34 |
gray matter | 2.93e-12 | 34 |
telencephalon | 3.64e-12 | 34 |
regional part of cerebral cortex | 7.18e-12 | 22 |
neocortex | 7.97e-12 | 20 |
regional part of telencephalon | 4.70e-11 | 32 |
nervous system | 1.31e-10 | 89 |
cerebral cortex | 7.27e-10 | 25 |
pallium | 7.27e-10 | 25 |
adult organism | 9.77e-10 | 114 |
central nervous system | 2.09e-09 | 81 |
brain | 4.28e-09 | 68 |
future brain | 4.28e-09 | 68 |
neurectoderm | 1.05e-08 | 86 |
neural plate | 4.77e-08 | 82 |
presumptive neural plate | 4.77e-08 | 82 |
pre-chordal neural plate | 2.94e-07 | 61 |
gyrus | 9.70e-07 | 6 |