FFCP PHASE1:Hg19::chr4:68749705..68749725,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:68749705..68749725,-
|short_description=p1@TMPRSS11D
|description=CAGE_peak_1_at_TMPRSS11D_5end
|association_with_transcript=0bp_to_ENST00000502822,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9407 | |EntrezGene=9407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24059 | |HGNC=24059 | ||
|TSSclassifier=strong | |||
|UniProt=O60235 | |UniProt=O60235 | ||
|association_with_transcript=0bp_to_ENST00000502822,ENST00000508409,NM_004262,uc003hdq.2,uc011caj.1_5end | |||
|cluster_id=chr4:68749705..68749725,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_TMPRSS11D_5end | |||
|id=chr4:68749705..68749725,- | |||
|ontology_enrichment_celltype=CL:0002076!4.14e-26!43;CL:0002368!7.71e-24!13;CL:0000223!1.24e-17!59;CL:0002202!2.43e-13!9;CL:0002632!2.43e-13!9;CL:0002621!1.01e-11!3;CL:0000068!4.64e-11!3;CL:0000069!4.64e-11!3;CL:0000307!4.64e-11!3;CL:0000377!4.64e-11!3;CL:0002328!4.97e-11!3;CL:0000622!7.34e-11!5;CL:0002623!9.75e-11!3;CL:0002251!3.41e-09!21;CL:0000154!4.66e-09!6;CL:0000575!9.34e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002202;6.41e-20;9!CL:0002632;6.41e-20;9!CL:0002368;2.94e-18;13!CL:0002621;6.01e-17;3!CL:0000307;5.04e-16;3!CL:0002328;7.05e-16;3!CL:0002076;1.11e-14;42!CL:0000575;6.42e-11;2!CL:0002251;7.94e-09;20!CL:0002166;3.68e-08;3!CL:0002623;1.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.00e-20,42;CL:0002202,7.22e-20,9;CL:0002632,7.22e-20,9;CL:0002368,3.41e-18,13;CL:0002621,6.17e-17,3;CL:0000068,6.20e-16,3;CL:0000069,6.20e-16,3;CL:0000307,6.20e-16,3;CL:0000377,6.20e-16,3;CL:0002328,6.87e-16,3;CL:0000223,3.39e-14,58;CL:0000575,6.10e-11,2;CL:0002251,7.88e-09,20;CL:0002166,3.68e-08,3;CL:0002623,1.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;5.04e-16;3!CL:0000223;1.41e-07;58!UBERON:0009143;5.90e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!5.12e-21!72;UBERON:0000065!4.10e-16!53;UBERON:0000161!5.77e-16!35;UBERON:0007196!1.19e-14!14;UBERON:0001558!1.19e-14!14;UBERON:0004119!2.52e-14!169;UBERON:0000925!2.52e-14!169;UBERON:0006595!2.52e-14!169;UBERON:0003126!2.40e-12!7;UBERON:0001005!2.40e-12!7;UBERON:0000166!3.21e-12!21;UBERON:0001949!1.01e-11!3;UBERON:0004815!4.97e-11!3;UBERON:0002031!4.97e-11!3;UBERON:0000165!1.00e-10!28;UBERON:0000930!1.00e-10!28;UBERON:0006562!1.26e-10!11;UBERON:0001007!6.18e-10!155;UBERON:0001555!6.18e-10!155;UBERON:0007026!6.18e-10!155;UBERON:0000072!9.32e-10!46;UBERON:0001444!2.56e-09!48;UBERON:0004921!7.58e-09!129;UBERON:0004185!7.58e-09!129;UBERON:0001042!1.78e-08!10;UBERON:0009145!1.78e-08!10;UBERON:0002185!2.27e-08!4;UBERON:0005178!3.40e-08!34;UBERON:0002224!3.40e-08!34;UBERON:0003102!3.42e-08!95;UBERON:0003127!4.54e-08!2;UBERON:0000077!5.79e-08!130;UBERON:0005181!6.63e-08!35;UBERON:0003408!6.69e-08!10;UBERON:0000341!9.03e-08!2;UBERON:0001255!3.19e-07!2;UBERON:0001556!3.19e-07!2;UBERON:0001041!5.88e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.22e-20;15!UBERON:0001558;1.22e-20;15!UBERON:0003126;3.04e-18;7!UBERON:0001005;3.04e-18;7!UBERON:0001949;6.01e-17;3!UBERON:0004815;7.05e-16;3!UBERON:0002031;7.05e-16;3!UBERON:0000165;7.82e-14;28!UBERON:0003127;2.41e-11;2!UBERON:0000486;7.36e-11;12!UBERON:0003350;8.81e-11;8!UBERON:0005178;6.45e-10;34!UBERON:0002224;6.45e-10;34!UBERON:0002185;9.87e-10;5!UBERON:0005181;1.28e-09;35!UBERON:0000161;1.65e-09;19!UBERON:0000166;1.65e-09;19!UBERON:0000344;6.57e-09;20!UBERON:0000002;1.73e-08;6!UBERON:0001560;1.73e-08;6!UBERON:0001723;2.01e-08;3!UBERON:0001033;2.01e-08;3!UBERON:0004807;4.79e-08;22!UBERON:0007811;9.79e-08;52!UBERON:0003929;1.61e-07;7!UBERON:0000485;4.46e-07;7!UBERON:0000072;5.05e-07;37!UBERON:0005795;6.23e-07;1!UBERON:0003975;6.49e-07;18!UBERON:0002372;7.77e-07;1!UBERON:0001961;7.77e-07;1!UBERON:0001744;7.77e-07;1!UBERON:0001042;7.77e-07;1!UBERON:0001735;7.77e-07;1!UBERON:0000033;8.42e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.24e-20,15;UBERON:0001558,1.24e-20,15;UBERON:0003126,3.15e-18,7;UBERON:0001005,3.15e-18,7;UBERON:0001949,6.17e-17,3;UBERON:0001004,1.57e-16,74;UBERON:0004815,6.87e-16,3;UBERON:0002031,6.87e-16,3;UBERON:0000161,2.11e-15,36;UBERON:0000166,2.02e-14,22;UBERON:0000153,1.17e-13,62;UBERON:0007811,1.17e-13,62;UBERON:0000165,2.64e-13,29;UBERON:0000930,2.64e-13,29;UBERON:0000033,3.77e-13,56;UBERON:0004119,7.47e-12,160;UBERON:0000925,7.47e-12,160;UBERON:0006595,7.47e-12,160;UBERON:0003127,2.06e-11,2;UBERON:0000065,2.09e-11,54;UBERON:0000072,2.62e-11,47;UBERON:0001007,6.21e-11,145;UBERON:0001555,6.21e-11,145;UBERON:0007026,6.21e-11,145;UBERON:0001444,8.32e-11,49;UBERON:0005178,8.77e-11,34;UBERON:0002224,8.77e-11,34;UBERON:0003350,9.64e-11,8;UBERON:0005181,1.97e-10,35;UBERON:0003102,6.81e-10,99;UBERON:0002185,9.73e-10,5;UBERON:0000344,6.92e-09,20;UBERON:0001041,8.80e-09,87;UBERON:0004921,8.93e-09,118;UBERON:0000002,1.60e-08,6;UBERON:0001560,1.60e-08,6;UBERON:0001723,2.01e-08,3;UBERON:0001033,2.01e-08,3;UBERON:0010056,2.01e-08,3;UBERON:0008947,2.02e-07,38;UBERON:0003258,2.02e-07,38;UBERON:0002372,7.77e-07,1;UBERON:0001961,7.77e-07,1;UBERON:0001744,7.77e-07,1;UBERON:0001735,7.77e-07,1 | |||
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| ||
|short_description=p1@TMPRSS11D | |||
}} | }} |
Latest revision as of 07:16, 18 September 2015
Short description: | p1@TMPRSS11D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMPRSS11D_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 0bp_to_ENST00000502822, ENST00000508409, NM_004262, uc003hdq.2, uc011caj.1_5end |
EntrezGene: | TMPRSS11D |
HGNC: | 24059 |
UniProt: | O60235 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.00e-20 | 42 |
epithelial cell of tracheobronchial tree | 7.22e-20 | 9 |
epithelial cell of lower respiratory tract | 7.22e-20 | 9 |
respiratory epithelial cell | 3.41e-18 | 13 |
gingival epithelial cell | 6.17e-17 | 3 |
duct epithelial cell | 6.20e-16 | 3 |
branched duct epithelial cell | 6.20e-16 | 3 |
tracheal epithelial cell | 6.20e-16 | 3 |
tracheoblast | 6.20e-16 | 3 |
bronchial epithelial cell | 6.87e-16 | 3 |
endodermal cell | 3.39e-14 | 58 |
corneal epithelial cell | 6.10e-11 | 2 |
epithelial cell of alimentary canal | 7.88e-09 | 20 |
epithelial cell of Malassez | 3.68e-08 | 3 |
acinar cell of salivary gland | 1.11e-07 | 3 |