FFCP PHASE1:Hg19::chr4:68749745..68749756,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9407 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24059 | |||
|TSSclassifier=strong | |||
|UniProt=O60235 | |||
|association_with_transcript=0bp_to_ENST00000283916_5end | |||
|cluster_id=chr4:68749745..68749756,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_2_at_TMPRSS11D_5end | |||
|id=chr4:68749745..68749756,- | |||
|ontology_enrichment_celltype=CL:0002166!3.46e-16!3;CL:0002621!7.37e-16!3;CL:0002076!1.47e-11!43;CL:0000575!7.09e-11!2;CL:0002159!1.41e-09!13;CL:0002368!4.96e-09!13;CL:0002251!5.83e-08!21;CL:0000223!7.29e-08!59;CL:0002623!1.30e-07!3;CL:0000068!1.44e-07!3;CL:0000069!1.44e-07!3;CL:0000307!1.44e-07!3;CL:0000377!1.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.62e-18;3!CL:0002621;1.62e-18;3!CL:0002159;4.88e-09;14!CL:0000575;7.78e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.14e-18,3;CL:0002621,2.12e-18,3;CL:0002159,4.68e-09,14;CL:0000575,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.66e-15;1!UBERON:0008814;3.56e-08;2!UBERON:0010056;3.56e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!7.37e-16!3;UBERON:0000161!4.46e-15!35;UBERON:0000166!2.23e-14!21;UBERON:0001708!2.90e-12!4;UBERON:0001704!2.90e-12!4;UBERON:0000341!6.11e-11!2;UBERON:0001004!1.42e-10!72;UBERON:0000165!1.84e-10!28;UBERON:0000930!1.84e-10!28;UBERON:0001255!4.31e-10!2;UBERON:0001556!4.31e-10!2;UBERON:0000365!5.28e-09!5;UBERON:0001444!1.06e-08!48;UBERON:0002090!2.55e-08!6;UBERON:0000002!3.87e-08!6;UBERON:0001560!3.87e-08!6;UBERON:0004119!4.92e-08!169;UBERON:0000925!4.92e-08!169;UBERON:0006595!4.92e-08!169;UBERON:0001723!5.45e-08!3;UBERON:0001033!5.45e-08!3;UBERON:0010056!5.45e-08!3;UBERON:0005910!1.40e-07!6;UBERON:0006562!1.42e-07!11;UBERON:0003102!3.17e-07!95;UBERON:0003126!4.46e-07!7;UBERON:0001005!4.46e-07!7;UBERON:0000078!6.15e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;9.08e-19;3!UBERON:0001033;9.08e-19;3!UBERON:0001949;1.62e-18;3!UBERON:0000165;1.05e-16;28!UBERON:0005795;6.66e-15;1!UBERON:0002372;1.15e-14;1!UBERON:0001961;1.15e-14;1!UBERON:0001744;1.15e-14;1!UBERON:0001042;1.15e-14;1!UBERON:0001735;1.15e-14;1!UBERON:0001708;3.85e-14;4!UBERON:0008895;3.85e-14;4!UBERON:0011159;1.67e-11;5!UBERON:0000161;2.25e-11;19!UBERON:0000166;2.25e-11;19!UBERON:0000020;1.87e-09;23!UBERON:0001032;4.53e-09;24!UBERON:0004456;4.53e-09;24!UBERON:0007811;5.29e-09;52!UBERON:0000033;7.81e-09;50!UBERON:0000153;1.01e-08;54!UBERON:0003929;1.78e-08;7!UBERON:0003127;4.23e-08;2!UBERON:0000341;5.55e-08;2!UBERON:0006562;5.55e-08;2!UBERON:0001555;7.37e-08;54!UBERON:0001444;1.52e-07;48!UBERON:0003350;1.60e-07;8!UBERON:0001828;1.60e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.61e-21,22;UBERON:0000153,3.85e-20,62;UBERON:0007811,3.85e-20,62;UBERON:0001723,7.94e-19,3;UBERON:0001033,7.94e-19,3;UBERON:0010056,7.94e-19,3;UBERON:0001949,2.12e-18,3;UBERON:0000033,4.12e-18,56;UBERON:0000165,4.08e-16,29;UBERON:0000930,4.08e-16,29;UBERON:0002372,1.07e-14,1;UBERON:0001961,1.07e-14,1;UBERON:0001744,1.07e-14,1;UBERON:0001735,1.07e-14,1;UBERON:0001708,2.95e-14,4;UBERON:0008895,2.95e-14,4;UBERON:0000161,6.22e-13,36;UBERON:0001042,1.18e-12,10;UBERON:0009145,1.18e-12,10;UBERON:0001444,1.23e-12,49;UBERON:0008814,3.84e-12,18;UBERON:0011159,1.35e-11,5;UBERON:0006562,1.47e-11,11;UBERON:0003102,7.78e-10,99;UBERON:0010188,8.11e-10,6;UBERON:0002539,8.11e-10,6;UBERON:0008816,8.11e-10,6;UBERON:0000020,4.68e-09,24;UBERON:0001032,4.68e-09,24;UBERON:0004456,4.68e-09,24;UBERON:0001004,3.06e-08,74;UBERON:0003127,4.09e-08,2;UBERON:0000341,5.74e-08,2;UBERON:0003350,1.76e-07,8;UBERON:0001828,1.76e-07,8;UBERON:0001557,6.50e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,1.15956511897978,2.18196896472668,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,2.83550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659215496907038,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,3.15496059865568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.69647365264322,0,0,0,0,0,3.87956065953678,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55880778281177,0.23806443146374,0,0,0,0,0,12.6275713780238,1.71116650542641,2.55937801455433,3.29922144806311,0,0.0814032686109745,0,0,0,0,0.244482888365733,3.25516942652591,0.665756774185513,0,0 | |||
|short_description=p2@TMPRSS11D | |||
}} |
Latest revision as of 07:17, 18 September 2015
Short description: | p2@TMPRSS11D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMPRSS11D_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 0bp_to_ENST00000283916_5end |
EntrezGene: | TMPRSS11D |
HGNC: | 24059 |
UniProt: | O60235 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.14e-18 | 3 |
gingival epithelial cell | 2.12e-18 | 3 |
general ecto-epithelial cell | 4.68e-09 | 14 |
corneal epithelial cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.61e-21 | 22 |
anterior region of body | 3.85e-20 | 62 |
craniocervical region | 3.85e-20 | 62 |
tongue | 7.94e-19 | 3 |
gustatory system | 7.94e-19 | 3 |
future tongue | 7.94e-19 | 3 |
gingival epithelium | 2.12e-18 | 3 |
head | 4.12e-18 | 56 |
mouth | 4.08e-16 | 29 |
stomodeum | 4.08e-16 | 29 |
tonsil | 1.07e-14 | 1 |
mucosa-associated lymphoid tissue | 1.07e-14 | 1 |
lymphoid tissue | 1.07e-14 | 1 |
tonsillar ring | 1.07e-14 | 1 |
jaw skeleton | 2.95e-14 | 4 |
splanchnocranium | 2.95e-14 | 4 |
orifice | 6.22e-13 | 36 |
chordate pharynx | 1.18e-12 | 10 |
pharyngeal region of foregut | 1.18e-12 | 10 |
subdivision of head | 1.23e-12 | 49 |
pharyngeal arch system | 3.84e-12 | 18 |
primary subdivision of cranial skeletal system | 1.35e-11 | 5 |
pharynx | 1.47e-11 | 11 |
surface structure | 7.78e-10 | 99 |
protuberance | 8.11e-10 | 6 |
pharyngeal arch | 8.11e-10 | 6 |
embryonic head | 8.11e-10 | 6 |
sense organ | 4.68e-09 | 24 |
sensory system | 4.68e-09 | 24 |
entire sense organ system | 4.68e-09 | 24 |
respiratory system | 3.06e-08 | 74 |
open tracheal system trachea | 4.09e-08 | 2 |
throat | 5.74e-08 | 2 |
epithelium of mucosa | 1.76e-07 | 8 |
gingiva | 1.76e-07 | 8 |
upper respiratory tract | 6.50e-07 | 19 |