FFCP PHASE1:Hg19::chr8:42358653..42358670,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:42358653..42358670,- to FFCP PHASE1:Hg19::chr8:42358653..42358670,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6575 | |EntrezGene=6575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10947 | |HGNC=10947 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=307bp_to_ENST00000520262,uc010lxl.2_5end | |||
|cluster_id=chr8:42358653..42358670,- | |||
|coexpression_cluster_id=C4755 | |||
|description=CAGE_peak_10_at_SLC20A2_5end | |||
|id=chr8:42358653..42358670,- | |||
|ontology_enrichment_celltype=CL:0002076!4.47e-09!43;CL:0002251!1.27e-07!21;CL:0000223!4.70e-07!59;CL:0000622!8.39e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.05e-14;14!CL:0000622;1.18e-14;5!CL:0000154;3.78e-12;6!CL:0000244;4.41e-11;4!CL:0000731;4.41e-11;4!CL:0002251;3.80e-10;20!CL:0002623;1.36e-09;3!CL:0000150;5.80e-08;9!CL:0000240;8.26e-08;6!CL:0000311;8.26e-08;6!CL:0000079;8.26e-08;6!CL:0000237;8.26e-08;6!CL:0000362;1.01e-07;9!CL:0002076;2.86e-07;42!CL:0000317;9.65e-07;2!CL:1000448;9.65e-07;2!CL:0002308;9.65e-07;2!CL:0002140;9.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.09e-14,14;CL:0000622,1.41e-14,5;CL:0000154,4.38e-12,6;CL:0000244,2.03e-11,4;CL:0000731,2.03e-11,4;CL:0002251,3.54e-10,20;CL:0002623,1.35e-09,3;CL:0002076,1.69e-08,42;CL:0000240,6.26e-08,6;CL:0000311,6.26e-08,6;CL:0000079,6.26e-08,6;CL:0000237,6.26e-08,6;CL:0000036,6.26e-08,6;CL:0000357,6.26e-08,6;CL:0000114,6.26e-08,6;CL:0000150,6.38e-08,9;CL:0000362,9.11e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;8.26e-08;6!CL:0000114;8.26e-08;6!UBERON:0005062;7.35e-07;4!UBERON:0007284;7.35e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.97e-29!115;UBERON:0004121!4.52e-15!169;UBERON:0000924!3.32e-14!173;UBERON:0006601!3.32e-14!173;UBERON:0001049!7.33e-13!57;UBERON:0005068!7.33e-13!57;UBERON:0006241!7.33e-13!57;UBERON:0007135!7.33e-13!57;UBERON:0000153!7.21e-12!129;UBERON:0007811!7.21e-12!129;UBERON:0003075!2.76e-11!86;UBERON:0007284!2.76e-11!86;UBERON:0000475!5.69e-11!365;UBERON:0000033!6.11e-11!123;UBERON:0002346!3.27e-10!90;UBERON:0000468!6.37e-10!659;UBERON:0003076!1.57e-09!15;UBERON:0003057!1.57e-09!15;UBERON:0002616!3.22e-09!59;UBERON:0000073!3.34e-09!94;UBERON:0001016!3.34e-09!94;UBERON:0001017!3.90e-09!82;UBERON:0005743!5.84e-09!86;UBERON:0000467!1.33e-08!625;UBERON:0000480!1.63e-08!626;UBERON:0000062!1.89e-08!511;UBERON:0000064!4.15e-08!219;UBERON:0004111!4.45e-08!241;UBERON:0004732!6.57e-08!13;UBERON:0000955!1.39e-07!69;UBERON:0006238!1.39e-07!69;UBERON:0000483!1.56e-07!309;UBERON:0000119!1.57e-07!312;UBERON:0004733!4.70e-07!12;UBERON:0002028!4.70e-07!12;UBERON:0007277!4.70e-07!12;UBERON:0000166!5.05e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;1.49e-12;6!UBERON:0000165;1.97e-10;28!UBERON:0004151;1.42e-09;3!UBERON:0003978;5.03e-09;3!UBERON:0000946;5.03e-09;3!UBERON:0000365;7.12e-09;5!UBERON:0000161;1.68e-08;19!UBERON:0000166;1.68e-08;19!UBERON:0007100;6.50e-08;25!UBERON:0003343;1.87e-07;4!UBERON:0004785;1.87e-07;4!UBERON:0005910;2.13e-07;6!UBERON:0005090;2.31e-07;2!UBERON:0001630;2.31e-07;2!UBERON:0000341;5.32e-07;2!UBERON:0000153;5.44e-07;54!UBERON:0007811;8.31e-07;52!UBERON:0010313;9.25e-07;10!UBERON:0002419;9.65e-07;2!UBERON:0007771;9.65e-07;2!UBERON:0002081;9.65e-07;2!UBERON:0002133;9.65e-07;2!UBERON:0003297;9.65e-07;2!UBERON:0001821;9.65e-07;2!UBERON:0003487;9.65e-07;2!UBERON:0001820;9.65e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.64e-13,62;UBERON:0007811,2.64e-13,62;UBERON:0000166,2.00e-11,22;UBERON:0000033,1.51e-10,56;UBERON:0003102,3.21e-10,99;UBERON:0000974,4.11e-10,10;UBERON:0000165,5.97e-10,29;UBERON:0000930,5.97e-10,29;UBERON:0001444,1.22e-09,49;UBERON:0004151,1.27e-09,3;UBERON:0000365,3.87e-09,5;UBERON:0004121,3.96e-09,171;UBERON:0000924,3.96e-09,171;UBERON:0006601,3.96e-09,171;UBERON:0003978,6.40e-09,3;UBERON:0009751,6.40e-09,3;UBERON:0000946,6.40e-09,3;UBERON:0002523,6.40e-09,3;UBERON:0005983,6.40e-09,3;UBERON:0002165,6.40e-09,3;UBERON:0002062,6.40e-09,3;UBERON:0007280,6.40e-09,3;UBERON:0007023,2.99e-08,114;UBERON:0005910,1.29e-07,6;UBERON:0003343,2.03e-07,4;UBERON:0004785,2.03e-07,4;UBERON:0005090,2.46e-07,2;UBERON:0001630,2.46e-07,2;UBERON:0007100,3.01e-07,27;UBERON:0000341,4.22e-07,2;UBERON:0003103,4.44e-07,68;UBERON:0001004,4.74e-07,74;UBERON:0002081,9.02e-07,2;UBERON:0010227,9.02e-07,2;UBERON:0002133,9.28e-07,2;UBERON:0008814,9.94e-07,18 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.423863802319124,0,0,0,0,1.0126579934476,0.292311015483596,0,0,0,1.06502877754984,0.302256294682921,0.169560592310488,1.35282597214308,0.818238361772504,0.860413786167011,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,2.85350742062426,2.24803506515239,1.91005047582099,2.4998880192803,0,0,0,0,0,0.288732895522148,0.925971025153221,0,0,0,0,0,0,0,2.01578553838631,1.41775097242386,4.56748465784526,2.90633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,1.59562869950922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0.40101294060657,0.920809889358963,0,0,0.131124414959424,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,4.01985876597321,1.30012049207304,0,0,0,0,0,0,0,0,0.534192213880424,2.14870389969272,0.192190067365106,1.91419068741876,0.708104465988849,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,1.92444225451024,0,1.08890984861323,0.376575203107117,2.58303223602738,1.68471475667626,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,3.38721580026819,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0.556608588971108,0,0,0.0874599999961957,0,0.910347586283997,0.254253650292766,0,0,0,0,0,0.361789315876224,3.05163472634166,0.552896299656123,0,0.438770794307945,0,5.01925479402972,0.769502585037971,0,0.23056390438806,0.359030577639089,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0.808813595768125,10.4335094148843,0.468528891450678,0,0.19566461893209,0,0.789168805698781,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,1.07791637155815,0.783532859223623,0.873633341210151,0,0,0,0,0.969890164884194,0,2.25980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0.136905378891993,0,0,0,4.18923601908381,1.14580212005842,1.43574604915363,1.99679000498991,8.15529491459485,2.67805748930247,6.85271419364608,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0.670869375198532,0.472834243795189,1.41627387964495,0,0,0.383830394638891,4.2881719582402,4.63464379255802,0,0.542999601753713,0,0,0,0,0,0,0.293104467356165,0,1.0342636508924,0.66116300871345,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.488105059607853,0.1251909307065,1.72022758707021,0.776503360757966,0.931446044120752,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0.279759015438889,2.48830904013189,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0.276629009856872,0.322951291263702,1.42769420259154,4.71109048804923,3.53909170043221,2.01771458373847,0.231051332300676,0,0,0.198916222116275,0,0,0,0.523813388962845,0,0,0.405225507710368,0.781078098613847,0,0.253663240775627,0,0,2.97726707033577,0,0.511049710558381,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,0.747667062745149,0.0657727735628491,0,0,0.549451649953598,0.157115589916002,0.560544326627578,0,0,0,2.35872595782966,0,0.116241425368125,0,0,7.45978190986933,3.58508801897295,1.38251932362818,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,3.23714418593947,10.6769319130497,1.1598144313382,1.94284397223656,0,0.198950775161368,0,0.22589216407792,0,0,0.154348316215889,0,0,0.735444965261716,0,2.35570160537934,0.891139200981258,0.8453114551668,0.339854229375634,0,0.128915775947154,0,1.07132363163395,0,0,0,0,0.573358332605805,0,0.271965960763659,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.454672189309436,0.267964130156178,1.65833887891756,0.413731983447581,2.98527574661373,3.33290204049236,0,1.24149428591716,0.3363955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| ||
|short_description=p10@SLC20A2 | |||
}} | }} |
Latest revision as of 07:56, 18 September 2015
Short description: | p10@SLC20A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC20A2_5end |
Coexpression cluster: | C4755_heart_oral_salivary_cervical_Mammary_Keratinocyte_skeletal |
Association with transcript: | 307bp_to_ENST00000520262, uc010lxl.2_5end |
EntrezGene: | SLC20A2 |
HGNC: | 10947 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.09e-14 | 14 |
acinar cell | 1.41e-14 | 5 |
protein secreting cell | 4.38e-12 | 6 |
transitional epithelial cell | 2.03e-11 | 4 |
urothelial cell | 2.03e-11 | 4 |
epithelial cell of alimentary canal | 3.54e-10 | 20 |
acinar cell of salivary gland | 1.35e-09 | 3 |
endo-epithelial cell | 1.69e-08 | 42 |
stratified squamous epithelial cell | 6.26e-08 | 6 |
keratin accumulating cell | 6.26e-08 | 6 |
stratified epithelial cell | 6.26e-08 | 6 |
keratinizing barrier epithelial cell | 6.26e-08 | 6 |
epithelial fate stem cell | 6.26e-08 | 6 |
stratified epithelial stem cell | 6.26e-08 | 6 |
surface ectodermal cell | 6.26e-08 | 6 |
glandular epithelial cell | 6.38e-08 | 9 |
epidermal cell | 9.11e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 2.64e-13 | 62 |
craniocervical region | 2.64e-13 | 62 |
oral opening | 2.00e-11 | 22 |
head | 1.51e-10 | 56 |
surface structure | 3.21e-10 | 99 |
neck | 4.11e-10 | 10 |
mouth | 5.97e-10 | 29 |
stomodeum | 5.97e-10 | 29 |
subdivision of head | 1.22e-09 | 49 |
cardiac chamber | 1.27e-09 | 3 |
urothelium | 3.87e-09 | 5 |
ectoderm-derived structure | 3.96e-09 | 171 |
ectoderm | 3.96e-09 | 171 |
presumptive ectoderm | 3.96e-09 | 171 |
valve | 6.40e-09 | 3 |
cardiac mesenchyme | 6.40e-09 | 3 |
cardial valve | 6.40e-09 | 3 |
tunica intima | 6.40e-09 | 3 |
heart layer | 6.40e-09 | 3 |
endocardium | 6.40e-09 | 3 |
endocardial cushion | 6.40e-09 | 3 |
presumptive endocardium | 6.40e-09 | 3 |
adult organism | 2.99e-08 | 114 |
transitional epithelium | 1.29e-07 | 6 |
mucosa of oral region | 2.03e-07 | 4 |
respiratory system mucosa | 2.03e-07 | 4 |
muscle structure | 2.46e-07 | 2 |
muscle organ | 2.46e-07 | 2 |
primary circulatory organ | 3.01e-07 | 27 |
throat | 4.22e-07 | 2 |
compound organ | 4.44e-07 | 68 |
respiratory system | 4.74e-07 | 74 |
cardiac atrium | 9.02e-07 | 2 |
future cardiac atrium | 9.02e-07 | 2 |
atrioventricular valve | 9.28e-07 | 2 |
pharyngeal arch system | 9.94e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.61e-07 | 2 |