FFCP PHASE1:Hg19::chr16:87865427..87865438,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11063 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=385bp_to_BC014177_5end | |||
|cluster_id=chr16:87865427..87865438,- | |||
|description=CAGE_peak_28_at_SLC7A5_5end | |||
|id=chr16:87865427..87865438,- | |||
|ontology_enrichment_celltype=CL:0000223!2.31e-09!59;CL:0000066!1.09e-08!254;CL:0002076!1.25e-08!43;CL:0002231!8.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002252;6.72e-26;1!CL:0002231;1.01e-09;3!CL:0002577;1.47e-09;3!CL:0000307;1.47e-09;3!CL:0002076;1.74e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,5.93e-26,1;CL:0002076,6.90e-10,42;CL:0002231,1.01e-09,3;CL:0002577,1.19e-09,3;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0000223,2.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;5.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.82e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!5.50e-09!5;UBERON:0003343!8.53e-08!4;UBERON:0004785!8.53e-08!4;UBERON:0000161!4.55e-07!35;UBERON:0004119!4.81e-07!169;UBERON:0000925!4.81e-07!169;UBERON:0006595!4.81e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;1.47e-09;3!UBERON:0001987;1.75e-07;4!UBERON:0003343;1.75e-07;4!UBERON:0004785;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,1.41e-09,3;UBERON:0009143,1.41e-09,3;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4;UBERON:0003343,1.59e-07,4;UBERON:0004785,1.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,1.1240175325762,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0.600686115687835,0.285826432630578,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,4.41988746892302,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.48335359146061,0,0,0,0,0,0,0,0.495854746082934,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0.32681539055697,0.278847488557207,0,0.113942055847001,0,0.538545866458633,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0.288109595976299,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,1.47221577751538,0.11796972334774,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p28@SLC7A5 | |||
}} |
Latest revision as of 08:13, 18 September 2015
Short description: | p28@SLC7A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_SLC7A5_5end |
Coexpression cluster: | NA |
Association with transcript: | 385bp_to_BC014177_5end |
EntrezGene: | SLC7A5 |
HGNC: | 11063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 5.93e-26 | 1 |
endo-epithelial cell | 6.90e-10 | 42 |
epithelial cell of prostate | 1.01e-09 | 3 |
placental epithelial cell | 1.19e-09 | 3 |
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
endodermal cell | 2.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
esophagus | 1.41e-09 | 3 |
esophageal region | 1.41e-09 | 3 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |
mucosa of oral region | 1.59e-07 | 4 |
respiratory system mucosa | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.82e-08 | 14 |