FFCP PHASE1:Hg19::chr16:87866311..87866331,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8140 | |EntrezGene=8140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11063 | |HGNC=11063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-201bp_to_BC114608_5end | |association_with_transcript=-201bp_to_BC114608_5end | ||
|cluster_id=chr16:87866311..87866331,- | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_4_at_SLC7A5_5end | |description=CAGE_peak_4_at_SLC7A5_5end | ||
|id=chr16:87866311..87866331,- | |id=chr16:87866311..87866331,- | ||
|ontology_enrichment_celltype=CL:0000066!1.50e-23!254;CL:0000063!7.72e-11!578;CL:0002076!3.79e-10!43;CL:0000223!1.53e-09!59;CL:0000548!3.83e-08!679;CL:0000004!3.83e-08!679;CL:0000255!3.83e-08!679;CL:0000012!5.15e-08!682;CL:0002077!1.50e-07!33 | |ontology_enrichment_celltype=CL:0000066!1.50e-23!254;CL:0000063!7.72e-11!578;CL:0002076!3.79e-10!43;CL:0000223!1.53e-09!59;CL:0000548!3.83e-08!679;CL:0000004!3.83e-08!679;CL:0000255!3.83e-08!679;CL:0000012!5.15e-08!682;CL:0002077!1.50e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.79e-12;42!CL:0002251;4.91e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.09e-21,253;CL:0002076,7.79e-15,42;CL:0000223,4.78e-11,58;CL:0002251,6.12e-08,20;CL:0002077,5.02e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.34e-11!143;DOID:305!4.09e-11!106;DOID:162!4.89e-09!235;DOID:14566!3.36e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.38e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.48e-07!169;UBERON:0000925!2.48e-07!169;UBERON:0006595!2.48e-07!169 | |ontology_enrichment_uberon=UBERON:0004119!2.48e-07!169;UBERON:0000925!2.48e-07!169;UBERON:0006595!2.48e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0003729;4.23e-11;13!UBERON:0001737;3.63e-10;9!UBERON:0001557;3.63e-10;9!UBERON:0000486;3.54e-08;12!UBERON:0000344;8.32e-08;20!UBERON:0003343;1.33e-07;4!UBERON:0004785;1.33e-07;4!UBERON:0000065;5.20e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,7.43e-11,13;UBERON:0001737,2.55e-10,9;UBERON:0001004,5.63e-09,74;UBERON:0004119,8.66e-09,160;UBERON:0000925,8.66e-09,160;UBERON:0006595,8.66e-09,160;UBERON:0000344,1.24e-07,20;UBERON:0003343,3.15e-07,4;UBERON:0004785,3.15e-07,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0.446961094427288,0,0,0,0,0.737201809504527,2.09340350391728,0.873765488520689,0.263766978228454,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0.393364276848904,0.383829398097213,0,0.919421224478927,1.204823675113,2.21852406100073,0.232401601740905,0.142169232487422,0,0,0.802177789880567,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,1.23882548358041,0.863077176966451,1.2808035326455,0,0.689491361473237,0.645484683583826,2.70852973188684,0.188242339542605,0.272906150057846,0.449446968890169,5.81559395504715,0.641858054152187,2.55734850319616,0,0,0.426224750532694,3.19230162491442,1.13477044938228,1.24564449799115,0,1.0429658368404,0.434377689410233,1.81619850790011,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,1.33720097891754,0,0,0,0.12786256184353,0.361439152384566,0,1.01392563272577,0,0.486634870302636,0,0.886917589850256,0.087834785693126,0.130979075497713,3.27865759463288,4.44941331341315,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0,0,0,0.183201743930407,1.31780417436063,0,3.05265836499774,0,0.379891534993739,0,0.573673241497627,0.354668382198357,0,1.06748995729705,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.597794722207204,0.117434498643765,0,0,0,0,0.309977343527296,1.18800285728205,1.23633464639278,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0.538168907066586,0,0,0.600182192168805,0.103052529238439,0,0.37223371266318,0,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.403008392910561,0,2.31913023795956,1.36373060295417,1.14721838155602,0.243947412259191,0,0.232387885739037,0.10366105501537,0.252320850875628,0.72995471815166,0,3.85944562915731,0,0,0,1.30137480043828,1.18009283054671,1.44606617930089,1.32352767278873,2.61455332910887,0.474541238222193,1.21348177344148,1.17732879075208,1.53898862778556,0.738155454624648,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0,3.62175941848464,4.49607013030478,0.904760751704678,1.66659201285353,0.651616610620649,0,2.88662684050547,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0.93733833986777,0.503946384596579,0.567100388969546,1.79117045405697,1.74380363108377,1.53353071666084,0,0.264145302039678,0,0,0,0.571481048629521,2.29193055334967,1.17217447210047,5.13217338068116,1.64523988325318,0.901029173531752,1.14330573052231,0,0.43596006883328,0,0.517086863031111,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,0,0.414415513436035,0,0,0.271265023699736,0,2.3195768543631,0.315404830067869,0.35142424497814,0,2.27407504055985,1.03473071292505,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0.213455115606889,3.33440328590885,3.32870879020994,1.20956117331872,0.248107807818777,0.153461973288062,1.40330047216537,0.512556597022804,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0,0,0,0.966875596732978,7.81975234182811,17.2191449310126,0.918515585316854,0.546273504020151,0.917870904715969,0.451199612907412,0.385076685522074,0,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,1.09629938322967,1.0457418040996,1.02580050046556,0.328014645699706,0.325378394664303,0.206082023295445,0.0915694648183434,0.247528499761764,1.14853107599234,14.3013254128035,0,2.03008508413456,0.308097234229289,0,0.275673144969061,0.107420244868274,0,0,0.623224249527161,12.8922233981563,5.38132188622297,0.638063562472921,5.76599350876635,0.464845549297286,0.94443704049192,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0.855877976067841,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.545999645631943,1.1312434556297,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,2.32218398827431,0.658589785919804,0,0.349934720244983,1.34710957815717,0,3.26672954583968,0.282431402330337,2.58303223602738,3.36942951335251,2.21715076768338,0.689170200620878,0,0,0,0,0,0.648473311192717,0,0,0,0.962479855263359,0.490080431962063,1.30062222588003,0.144269212976445,0.284567373393656,0.956557636372934,0.199579371432817,0,0.423347165447766,0,0,0,0.783399478865116,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0.568272293612826,0.23874448473769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| ||
|short_description=p4@SLC7A5 | |short_description=p4@SLC7A5 | ||
}} | }} |
Latest revision as of 08:18, 18 September 2015
Short description: | p4@SLC7A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC7A5_5end |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | -201bp_to_BC114608_5end |
EntrezGene: | SLC7A5 |
HGNC: | 11063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.09e-21 | 253 |
endo-epithelial cell | 7.79e-15 | 42 |
endodermal cell | 4.78e-11 | 58 |
epithelial cell of alimentary canal | 6.12e-08 | 20 |
ecto-epithelial cell | 5.02e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 7.43e-11 | 13 |
larynx | 2.55e-10 | 9 |
respiratory system | 5.63e-09 | 74 |
endoderm-derived structure | 8.66e-09 | 160 |
endoderm | 8.66e-09 | 160 |
presumptive endoderm | 8.66e-09 | 160 |
mucosa | 1.24e-07 | 20 |
mucosa of oral region | 3.15e-07 | 4 |
respiratory system mucosa | 3.15e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.38e-07 | 143 |