FFCP PHASE1:Hg19::chr5:59817936..59817963,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000506510_5end | |||
|cluster_id=chr5:59817936..59817963,- | |||
|coexpression_cluster_id=C2115 | |||
|description=CAGE_peak_19_at_PDE4D_5end | |||
|id=chr5:59817936..59817963,- | |||
|ontology_enrichment_celltype=CL:0002087!1.29e-33!119;CL:0000738!1.77e-33!140;CL:0002031!1.07e-30!124;CL:0000037!2.22e-29!172;CL:0000566!2.22e-29!172;CL:0000988!8.16e-28!182;CL:0000945!1.25e-27!24;CL:0000826!1.25e-27!24;CL:0002032!1.36e-27!165;CL:0000837!1.36e-27!165;CL:0000557!4.09e-24!71;CL:0002009!5.25e-24!65;CL:0002194!4.66e-22!63;CL:0000576!4.66e-22!63;CL:0000040!4.66e-22!63;CL:0000559!4.66e-22!63;CL:0000839!2.42e-20!70;CL:0000236!7.10e-19!14;CL:0000766!1.64e-18!76;CL:0000763!2.41e-17!112;CL:0000049!2.41e-17!112;CL:0002057!2.89e-16!42;CL:0000860!1.56e-14!45;CL:0000542!9.52e-10!53;CL:0000051!9.52e-10!53;CL:0000838!5.14e-09!52;CL:0000990!1.35e-08!8;CL:0000453!9.33e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.77e-66;24!CL:0000236;3.50e-44;13!CL:0000542;2.70e-19;53!CL:0000840;2.55e-13;5!CL:0000235;5.35e-13;6!CL:0002087;6.26e-12;104!CL:0000738;8.20e-11;136!CL:0002619;2.77e-10;3!CL:0000990;8.89e-09;8!CL:0001014;5.38e-08;2!CL:0001016;5.38e-08;2!CL:0000988;2.03e-07;177!CL:0000451;4.02e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.79e-66,24;CL:0000826,1.79e-66,24;CL:0000236,2.79e-47,14;CL:0002087,1.43e-45,115;CL:0002031,3.51e-41,120;CL:0000738,3.53e-41,136;CL:0000037,6.69e-33,168;CL:0002032,2.11e-31,161;CL:0000837,2.11e-31,161;CL:0000988,1.15e-30,177;CL:0000542,1.66e-29,53;CL:0000051,1.66e-29,53;CL:0000838,2.31e-27,52;CL:0002009,3.39e-17,61;CL:0000557,6.96e-17,67;CL:0002194,3.89e-14,59;CL:0000576,3.89e-14,59;CL:0000040,3.89e-14,59;CL:0000559,3.89e-14,59;CL:0000840,1.29e-13,5;CL:0001029,1.29e-13,5;CL:0000235,6.03e-13,6;CL:0000839,3.45e-12,66;CL:0000817,4.42e-11,3;CL:0000766,8.01e-11,72;CL:0002619,2.25e-10,3;CL:0000134,7.56e-10,354;CL:0002320,1.89e-09,361;CL:0000990,5.73e-09,8;CL:0000763,1.42e-08,108;CL:0000049,1.42e-08,108;CL:0000473,4.09e-08,48;CL:0000234,4.09e-08,48;CL:0000219,4.71e-08,386;CL:0001014,5.29e-08,2;CL:0001016,5.29e-08,2;CL:0000785,7.19e-08,2;CL:0000955,7.19e-08,2;CL:0000818,7.19e-08,2;CL:0000954,7.19e-08,2;CL:0000816,7.19e-08,2;CL:0000451,2.83e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;2.70e-19;53!CL:0000954;6.95e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.66e-30!102;UBERON:0003061!4.66e-30!102;UBERON:0002193!6.13e-29!112;UBERON:0002371!4.94e-22!80;UBERON:0001474!2.28e-19!86;UBERON:0002405!2.95e-18!115;UBERON:0007023!7.22e-18!115;UBERON:0004765!6.43e-15!101;UBERON:0001434!6.43e-15!101;UBERON:0003081!7.39e-11!216;UBERON:0001049!2.45e-07!57;UBERON:0005068!2.45e-07!57;UBERON:0006241!2.45e-07!57;UBERON:0007135!2.45e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.36e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.19e-21,98;UBERON:0003061,4.19e-21,98;UBERON:0002193,4.50e-20,108;UBERON:0002405,8.98e-18,93;UBERON:0002371,6.08e-16,76;UBERON:0001474,2.22e-14,82;UBERON:0004765,1.26e-12,90;UBERON:0001434,7.79e-11,100;UBERON:0002106,2.92e-10,3;UBERON:0004854,2.92e-10,3;UBERON:0009034,2.92e-10,3;UBERON:0002095,2.92e-10,3;UBERON:0004782,2.92e-10,3;UBERON:0003281,2.92e-10,3;UBERON:0009664,2.92e-10,3;UBERON:0002296,2.92e-10,3;UBERON:0005602,2.92e-10,3;UBERON:0001179,2.92e-10,3;UBERON:0006293,2.92e-10,3;UBERON:0002384,6.59e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58480434487708,2.79142004129816,3.14843125254717,0,0,0.154816123316076,0,0,0,10.3031376771801,8.95666164670756,0.293600439334847,0,1.00272223735071,0.868043482863407,2.68698569087909,3.56283032620878,1.54545340580512,0.290796477559129,0.377875943688809,0.242584061187816,0,0.822335776043652,0,0.28769239232215,0.256160706529101,0.709446689665756,0,0.645484683583826,1.35426486594342,0,0.272906150057846,0.674170453335254,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.797854630486527,0,1.45104619314292,0,0,0,1.5644487552606,0,3.63239701580021,0.736555271975129,1.26584954976354,0,0,0.838634582033504,0.44931452458598,0.450530678524519,0.964353520182481,0.855038231223746,1.79025009479181,2.55729815270488,12.3197371122926,22.3916830617474,15.1216573156804,10.6682555641627,13.2130675721884,12.0698012390441,12.5598525829124,12.4026988089597,14.2303242277362,7.04684627245127,6.49864487812889,0,0.560508562981536,3.95076127162616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,1.9472843619281,1.74129737299267,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,1.47730203652438,3.27605971194933,1.63494278517601,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,1.07857100409308,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.952927101831156,2.87953591160336,0.648473311192717,1.08006287447623,0,0,0,0,10.7765841572917,10.0988449083511,0,0,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0.605399121573143,0.851692475380653,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0.140669416410513,0,0,0,0.398495976502139,3.03912307084262,0,0,24.4938762867528,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0.296521128680622,0,0.104421949505455,0.606610196826093,0.802577647298789,0,4.37891494117598,0,0,0.789168805698781,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,1.27746588066972,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0.423366660328922,0.795229689809303,0.408610218334727,0,0,0,9.22392955361152,5.41661368190565,0.0607495566580247,0,0.394028536495991,0.157363764404994,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.628817220398664,0.414239055347196,0.992332043623902,2.17372795087739,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.779441235357554,0.930053882193542,0.981392365535065,0,0,0,0,1.28030075632969,10.3328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5073073902782,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.19024743058172,0,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0.177404740325278,5.18552944001007,0,0.339848664884159,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,1.09279780251979,0,0.245148321753905,0,0,0.891139200981258,0.4226557275834,0,1.12780701575824,4.12530483030894,2.59847005404815,0,0,0,0.730336388246517,0,0.430018749454354,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.639701945702943,0.23806443146374,0.258355639344024,0.744896571550295,0,0,0,0.870866991587845,0,4.44523549896278,0.215166616178029,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.805095174364105,13.4638766767358 | |||
|short_description=p19@PDE4D | |||
}} |
Latest revision as of 08:23, 18 September 2015
Short description: | p19@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PDE4D_5end |
Coexpression cluster: | C2115_b_myeloma_CD19_acute_non_xeroderma_Burkitt |
Association with transcript: | 0bp_to_ENST00000506510_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.19e-21 | 98 |
blood island | 4.19e-21 | 98 |
hemolymphoid system | 4.50e-20 | 108 |
immune system | 8.98e-18 | 93 |
bone marrow | 6.08e-16 | 76 |
bone element | 2.22e-14 | 82 |
skeletal element | 1.26e-12 | 90 |
skeletal system | 7.79e-11 | 100 |
spleen | 2.92e-10 | 3 |
gastrointestinal system mesentery | 2.92e-10 | 3 |
stomach region | 2.92e-10 | 3 |
mesentery | 2.92e-10 | 3 |
gastrointestinal system serosa | 2.92e-10 | 3 |
mesentery of stomach | 2.92e-10 | 3 |
gut mesentery | 2.92e-10 | 3 |
dorsal mesentery | 2.92e-10 | 3 |
dorsal mesogastrium | 2.92e-10 | 3 |
peritoneal cavity | 2.92e-10 | 3 |
spleen primordium | 2.92e-10 | 3 |
connective tissue | 6.59e-09 | 371 |