FFCP PHASE1:Hg19::chr9:96717629..96717644,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=955 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBU1 | |||
|association_with_transcript=9bp_to_ENST00000253968_5end | |||
|cluster_id=chr9:96717629..96717644,- | |||
|coexpression_cluster_id=C242 | |||
|description=CAGE_peak_1_at_BARX1_5end | |||
|id=chr9:96717629..96717644,- | |||
|ontology_enrichment_celltype=CL:0000153!2.24e-11!9;CL:0000447!2.24e-11!9;CL:0000327!1.40e-09!14;CL:0000667!1.92e-08!6;CL:0000058!1.92e-08!6;CL:0000138!1.92e-08!6;CL:0002556!2.35e-08!6;CL:0002552!7.99e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.07e-14;9!CL:0000447;2.07e-14;9!CL:0002556;2.31e-12;6!CL:0000327;5.17e-12;15!CL:0002552;1.51e-11;5!CL:0000138;9.03e-10;6!CL:0002615;1.72e-07;3!CL:0002579;2.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.82e-14,9;CL:0000447,1.82e-14,9;CL:0002556,2.11e-12,6;CL:0000327,5.11e-12,15;CL:0002552,1.48e-11,5;CL:0000058,8.88e-10,6;CL:0000138,8.88e-10,6;CL:0002615,1.76e-07,3;CL:0002579,2.97e-07,3;CL:0000151,9.92e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!1.08e-13!28;UBERON:0000930!1.08e-13!28;UBERON:0004457!1.48e-09!12;UBERON:0000042!1.48e-09!12;UBERON:0003688!8.86e-09!6;UBERON:0002358!8.86e-09!6;UBERON:0003684!8.86e-09!6;UBERON:0001178!8.86e-09!6;UBERON:0001758!2.35e-08!6;UBERON:0003672!2.35e-08!6;UBERON:0000078!1.65e-07!18;UBERON:0000075!2.52e-07!13;UBERON:0005944!2.52e-07!13;UBERON:0004288!2.52e-07!13;UBERON:0003089!2.52e-07!13;UBERON:0000166!2.97e-07!21;UBERON:0001444!4.51e-07!48;UBERON:0004905!8.38e-07!5;UBERON:0000982!8.38e-07!5;UBERON:0004770!8.38e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.07e-17;9!UBERON:0000042;1.07e-17;9!UBERON:0000165;4.41e-15;28!UBERON:0003688;4.34e-13;6!UBERON:0002358;4.34e-13;6!UBERON:0003684;4.34e-13;6!UBERON:0001178;4.34e-13;6!UBERON:0001758;2.31e-12;6!UBERON:0003672;2.31e-12;6!UBERON:0000075;2.78e-11;16!UBERON:0003129;1.82e-10;7!UBERON:0003729;2.46e-09;13!UBERON:0011137;1.47e-08;11!UBERON:0010323;1.47e-08;11!UBERON:0004905;1.57e-08;8!UBERON:0000982;1.57e-08;8!UBERON:0004770;1.57e-08;8!UBERON:0001555;3.89e-08;54!UBERON:0000473;4.07e-08;8!UBERON:0001434;4.91e-08;36!UBERON:0001828;5.47e-07;8!UBERON:0000344;8.44e-07;20!UBERON:0000945;8.88e-07;5!UBERON:0010039;8.88e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,1.60e-16,29;UBERON:0000930,1.60e-16,29;UBERON:0003688,4.48e-13,6;UBERON:0002358,4.48e-13,6;UBERON:0003684,4.48e-13,6;UBERON:0001178,4.48e-13,6;UBERON:0004457,8.80e-13,12;UBERON:0000042,8.80e-13,12;UBERON:0001758,2.11e-12,6;UBERON:0003672,2.11e-12,6;UBERON:0000075,2.65e-11,16;UBERON:0003129,1.69e-10,7;UBERON:0003729,2.41e-09,13;UBERON:0010323,1.40e-08,11;UBERON:0004905,1.46e-08,8;UBERON:0000982,1.46e-08,8;UBERON:0004770,1.46e-08,8;UBERON:0004458,1.51e-08,49;UBERON:0011137,2.02e-08,14;UBERON:0000473,4.25e-08,8;UBERON:0001444,6.32e-08,49;UBERON:0000166,2.06e-07,22;UBERON:0001828,5.40e-07,8;UBERON:0000344,8.41e-07,20 | |||
|phase1_expression=0,0,26.3584735659466,21.0153926541574,20.5602103436552,0,0,0,0,0,0,0,0,16.5846912966462,10.9361133990212,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,43.372698286148,59.157873455035,48.3787373329151,16.7010048880731,45.7436778084478,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,21.2320338105089,41.8865022033129,37.6105843479786,24.9480600029231,17.308685049499,0,0,13.2985530023712,13.2625631064282,11.6366928503357,22.8268362858036,5.82326812018137,19.380709598951,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0.773043412653187,0,0,0.121973706129595,0.397589304964456,3.25343040034651,2.69518743039963,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.115740113314,1.47008711385542,0,0,0,0,0,0.686271241194102,0,0,0,17.2214507994865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.13886318060882,6.97226766880235,5.19859554146697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,13.2506811056671,0,0.271265023699736,29.5318623373746,1.60586089917446,0.315404830067869,9.60559602940248,5.11608369537122,0,1.03473071292505,0,5.16233671916769,0,0,0.343143423810856,0,0,0,0.606255142892519,0,0.907170879989041,0,0,0,29.4720043288112,11.7692667285342,16.5679538777916,1.48418066444991,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16661452946496,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84991942105343,0.245040215981032,0,0,0,0,0,0,0,0,0,180.990100473321,0,0,0,0,1.41259795033733,0,0,65.74952356201,71.8000306334655,70.9108852275611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7231515283196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,4.48166385213904,0.291604613383254,9.72299971626437,0.885741385813839,0,0,0,0,0,5.33798471243052,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0.189559738885464,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0,0,0.677294319023596,0.438535902517113,1.56019368401098,0.0969890164884194,0.176512253383001,0.225980740780532,0,0.794858446811959,0.0633107959558787,14.861905087845,0,0,3.79638258206047,8.78951544640046,7.10126896228677,0,0,0.372757606696298,7.54220910773745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.482259445395058,0.550157746388935,0.415440338029185,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,14.2022608038609,0,0,0,0.947015026375446,2.0125432140206,0,0,0,0.310874401165561,0,0,0.449803112163605,0,0,14.8871360152477,0.521745061811734,5.10875870590543,1.90402606084398,3.66183659884195,0,1.61115835563733,0,0,0,0,0,7.57109389371906,23.1143796488764,1.92997432237433,0,0,0,0.244736704506468,0,1.23520578864389,0,0,0,0,0,0.345430341731199,7.90035886061194,0,0,0,0,7.8626363723139,0,0,0,13.1230827523793,0,0,0,0,1.86623178009892,1.91841556955478,0,0,0,0,0,0.123935764259002,0,29.2564002601145,0,22.4159809519932,15.8704174660808,1.531227386766,0,0,0,0,0,0,0,0,0,3.30315225373673,0,2.77261598760812,0,4.1421595563606,5.17182177502314,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,7.03484977438482,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,20.689134404007,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9212222020053,0,7.96764608209709,0.11294608203896,0,5.28369952483357,0,0,0,0,23.331978163061,0,0,0,0,0,0.0644578879735772,0,0,0,0,40.898837741805,0.458729283404541,0,18.6170443387958,0,0,3.7031878836078,0,18.0248495166253,0,0.126166424835079,0,0,10.912804782392,2.40495664739004,8.73001545581027,27.8285368614536,1.81868875723775,1.33982065078089,0,0,1.49263787330687,0.23806443146374,0,0,0,0.0636471582781649,0.404234377916439,3.04803447055746,3.42233301085281,0.471464371102113,0.0717222053926763,1.66330178273007,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p1@BARX1 | |||
}} |
Latest revision as of 09:28, 18 September 2015
Short description: | p1@BARX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BARX1_5end |
Coexpression cluster: | C242_acute_Chondrocyte_myelodysplastic_granulocyte_biphenotypic_Fibroblast_stomach |
Association with transcript: | 9bp_to_ENST00000253968_5end |
EntrezGene: | BARX1 |
HGNC: | 955 |
UniProt: | Q9HBU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.82e-14 | 9 |
carbohydrate secreting cell | 1.82e-14 | 9 |
fibroblast of periodontium | 2.11e-12 | 6 |
extracellular matrix secreting cell | 5.11e-12 | 15 |
fibroblast of gingiva | 1.48e-11 | 5 |
chondroblast | 8.88e-10 | 6 |
chondrocyte | 8.88e-10 | 6 |
adipocyte of omentum tissue | 1.76e-07 | 3 |
omentum preadipocyte | 2.97e-07 | 3 |
secretory cell | 9.92e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
mouth | 1.60e-16 | 29 |
stomodeum | 1.60e-16 | 29 |
omentum | 4.48e-13 | 6 |
peritoneum | 4.48e-13 | 6 |
abdominal cavity | 4.48e-13 | 6 |
visceral peritoneum | 4.48e-13 | 6 |
cavity lining | 8.80e-13 | 12 |
serous membrane | 8.80e-13 | 12 |
periodontium | 2.11e-12 | 6 |
dentition | 2.11e-12 | 6 |
subdivision of skeletal system | 2.65e-11 | 16 |
skull | 1.69e-10 | 7 |
mouth mucosa | 2.41e-09 | 13 |
cranial skeletal system | 1.40e-08 | 11 |
articulation | 1.46e-08 | 8 |
skeletal joint | 1.46e-08 | 8 |
articular system | 1.46e-08 | 8 |
body cavity or lining | 1.51e-08 | 49 |
axial skeletal system | 2.02e-08 | 14 |
testis | 4.25e-08 | 8 |
subdivision of head | 6.32e-08 | 49 |
oral opening | 2.06e-07 | 22 |
gingiva | 5.40e-07 | 8 |
mucosa | 8.41e-07 | 20 |