FFCP PHASE1:Hg19::chr2:17773405..17773425,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:17773405..17773425,+ to FFCP PHASE1:Hg19::chr2:17773405..17773425,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7447 | |EntrezGene=7447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12722 | |HGNC=12722 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_AB528541,DQ890800,DQ893955_5end | |||
|cluster_id=chr2:17773405..17773425,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_8_at_VSNL1_5end | |||
|id=chr2:17773405..17773425,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.77e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.47e-71!57;UBERON:0005068!9.47e-71!57;UBERON:0006241!9.47e-71!57;UBERON:0007135!9.47e-71!57;UBERON:0002616!1.26e-60!59;UBERON:0002619!3.93e-58!22;UBERON:0001017!4.31e-57!82;UBERON:0002020!1.67e-56!34;UBERON:0003528!1.67e-56!34;UBERON:0001893!3.95e-56!34;UBERON:0001869!1.56e-55!32;UBERON:0003075!1.55e-54!86;UBERON:0007284!1.55e-54!86;UBERON:0005743!5.45e-54!86;UBERON:0002791!2.44e-53!33;UBERON:0000955!6.34e-53!69;UBERON:0006238!6.34e-53!69;UBERON:0001950!2.60e-52!20;UBERON:0002346!1.19e-51!90;UBERON:0000956!1.00e-50!25;UBERON:0000203!1.00e-50!25;UBERON:0002780!2.52e-49!41;UBERON:0001890!2.52e-49!41;UBERON:0006240!2.52e-49!41;UBERON:0003080!5.35e-48!42;UBERON:0000073!6.02e-48!94;UBERON:0001016!6.02e-48!94;UBERON:0007023!1.15e-36!115;UBERON:0000033!1.38e-36!123;UBERON:0000153!2.13e-34!129;UBERON:0007811!2.13e-34!129;UBERON:0003056!1.68e-33!61;UBERON:0004121!6.36e-28!169;UBERON:0000924!5.05e-27!173;UBERON:0006601!5.05e-27!173;UBERON:0003076!3.28e-23!15;UBERON:0003057!3.28e-23!15;UBERON:0000200!3.31e-20!6;UBERON:0004733!6.75e-20!12;UBERON:0002028!6.75e-20!12;UBERON:0007277!6.75e-20!12;UBERON:0001871!1.81e-19!7;UBERON:0000025!2.95e-19!194;UBERON:0004732!3.17e-18!13;UBERON:0002021!3.23e-16!5;UBERON:0000349!6.40e-16!5;UBERON:0004111!2.76e-15!241;UBERON:0002298!7.67e-14!8;UBERON:0000064!5.56e-13!219;UBERON:0000477!8.35e-13!286;UBERON:0002680!2.47e-12!9;UBERON:0001895!2.47e-12!9;UBERON:0010092!2.47e-12!9;UBERON:0000483!8.96e-12!309;UBERON:0000119!1.49e-11!312;UBERON:0002771!4.07e-11!3;UBERON:0001872!4.84e-11!5;UBERON:0000988!1.96e-10!3;UBERON:0001896!5.49e-10!3;UBERON:0005290!5.49e-10!3;UBERON:0010096!5.49e-10!3;UBERON:0000475!1.55e-09!365;UBERON:0002308!1.44e-08!9;UBERON:0000125!1.44e-08!9;UBERON:0002420!1.58e-08!9;UBERON:0007245!1.58e-08!9;UBERON:0010009!1.58e-08!9;UBERON:0010011!1.58e-08!9;UBERON:0000454!1.58e-08!9;UBERON:0000062!6.61e-08!511;UBERON:0000481!6.77e-08!347;UBERON:0001870!7.15e-08!2;UBERON:0002148!1.46e-07!2;UBERON:0009662!1.46e-07!2;UBERON:0000369!1.74e-07!4;UBERON:0002435!1.74e-07!4;UBERON:0000204!1.74e-07!4;UBERON:0010082!1.74e-07!4;UBERON:0001876!1.76e-07!2;UBERON:0001954!2.00e-07!2;UBERON:0003022!2.00e-07!2;UBERON:0002421!2.00e-07!2;UBERON:0002600!2.00e-07!2;UBERON:0002360!4.65e-07!2;UBERON:0000094!4.65e-07!2;UBERON:0007645!4.65e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.14e-66;20!UBERON:0002619;2.27e-60;22!UBERON:0000956;2.86e-53;25!UBERON:0000203;2.86e-53;25!UBERON:0000200;2.91e-49;6!UBERON:0003528;5.66e-39;34!UBERON:0002020;5.66e-39;34!UBERON:0001869;7.31e-39;32!UBERON:0001870;5.41e-36;3!UBERON:0001893;5.45e-36;34!UBERON:0002791;7.92e-36;32!UBERON:0002702;5.58e-25;2!UBERON:0002771;6.29e-25;2!UBERON:0002780;5.01e-22;41!UBERON:0001890;5.01e-22;41!UBERON:0001872;8.39e-22;5!UBERON:0002021;9.67e-22;5!UBERON:0001017;2.58e-20;75!UBERON:0000073;9.23e-19;53!UBERON:0002616;9.23e-19;53!UBERON:0000955;1.62e-14;68!UBERON:0002581;7.68e-13;1!UBERON:0003112;7.68e-13;1!UBERON:0011158;7.68e-13;1!UBERON:0003128;7.68e-13;1!UBERON:0001703;7.68e-13;1!UBERON:0002241;7.68e-13;1!UBERON:0001016;1.40e-12;83!UBERON:0004733;3.28e-09;12!UBERON:0002028;3.28e-09;12!UBERON:0002298;1.31e-08;6!UBERON:0004732;1.53e-08;13!UBERON:0007023;1.83e-08;114!UBERON:0001871;8.64e-08;6!UBERON:0002360;3.48e-07;2!UBERON:0000094;3.48e-07;2!UBERON:0010743;3.48e-07;2!UBERON:0002148;4.69e-07;2!UBERON:0006331;4.69e-07;2!UBERON:0009662;4.69e-07;2!UBERON:0011216;5.27e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.56e-66,20;UBERON:0002619,2.55e-60,22;UBERON:0000956,3.17e-53,25;UBERON:0000203,3.17e-53,25;UBERON:0000200,2.91e-49,6;UBERON:0003528,1.28e-46,34;UBERON:0002020,1.28e-46,34;UBERON:0002791,1.12e-41,32;UBERON:0001869,1.12e-41,32;UBERON:0000073,1.32e-40,53;UBERON:0002616,1.32e-40,53;UBERON:0001893,3.17e-39,34;UBERON:0001049,2.21e-38,56;UBERON:0005068,2.21e-38,56;UBERON:0006241,2.21e-38,56;UBERON:0007135,2.21e-38,56;UBERON:0001870,6.10e-36,3;UBERON:0000955,1.09e-35,68;UBERON:0006238,1.09e-35,68;UBERON:0001017,3.81e-34,81;UBERON:0002780,1.78e-32,41;UBERON:0001890,1.78e-32,41;UBERON:0003080,1.78e-32,41;UBERON:0006240,1.78e-32,41;UBERON:0001016,1.25e-30,89;UBERON:0003075,7.78e-26,82;UBERON:0007284,7.78e-26,82;UBERON:0002771,6.29e-25,2;UBERON:0002702,6.29e-25,2;UBERON:0002346,1.44e-24,86;UBERON:0007023,2.49e-24,114;UBERON:0001872,7.29e-22,5;UBERON:0002021,1.20e-21,5;UBERON:0003056,1.43e-21,61;UBERON:0010371,4.67e-20,104;UBERON:0010314,6.36e-18,132;UBERON:0004121,2.66e-15,171;UBERON:0000924,2.66e-15,171;UBERON:0006601,2.66e-15,171;UBERON:0003112,5.38e-13,1;UBERON:0011158,5.38e-13,1;UBERON:0003128,5.38e-13,1;UBERON:0001703,5.38e-13,1;UBERON:0002241,5.38e-13,1;UBERON:0004761,5.38e-13,1;UBERON:0009617,5.38e-13,1;UBERON:0011216,6.05e-13,223;UBERON:0002581,6.82e-13,1;UBERON:0000025,4.62e-10,192;UBERON:0004733,3.37e-09,12;UBERON:0002028,3.37e-09,12;UBERON:0007277,3.37e-09,12;UBERON:0002298,1.47e-08,6;UBERON:0004732,1.57e-08,13;UBERON:0001871,8.64e-08,6;UBERON:0004111,1.16e-07,240;UBERON:0003076,1.84e-07,15;UBERON:0003057,1.84e-07,15;UBERON:0002360,3.28e-07,2;UBERON:0000094,3.28e-07,2;UBERON:0010743,3.28e-07,2;UBERON:0005253,3.93e-07,2;UBERON:0002148,5.28e-07,2;UBERON:0006331,5.28e-07,2;UBERON:0009662,5.28e-07,2 | |||
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| ||
|short_description=p8@VSNL1 | |||
}} | }} |
Latest revision as of 10:04, 18 September 2015
Short description: | p8@VSNL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_VSNL1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 63bp_to_AB528541, DQ890800, DQ893955_5end |
EntrezGene: | VSNL1 |
HGNC: | 12722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data