FFCP PHASE1:Hg19::chr1:50575466..50575485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1996 | |EntrezGene=1996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3315 | |HGNC=3315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000494555_5end | |association_with_transcript=-2bp_to_ENST00000494555_5end | ||
|cluster_id=chr1:50575466..50575485,+ | |||
|coexpression_cluster_id=C2589 | |coexpression_cluster_id=C2589 | ||
|description=CAGE_peak_3_at_ELAVL4_5end | |description=CAGE_peak_3_at_ELAVL4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.36e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.25e-18;82!UBERON:0006215;1.18e-09;3!UBERON:0006241;2.09e-08;3!UBERON:0003057;2.09e-08;3 | |ontology_enrichment_development_v019=UBERON:0006601;3.25e-18;82!UBERON:0006215;1.18e-09;3!UBERON:0006241;2.09e-08;3!UBERON:0003057;2.09e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;2.69e-08;6 | |ontology_enrichment_disease_v019=DOID:169;2.69e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,2.52e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.33e-84!57;UBERON:0005068!6.33e-84!57;UBERON:0006241!6.33e-84!57;UBERON:0007135!6.33e-84!57;UBERON:0001017!2.06e-76!82;UBERON:0005743!2.00e-74!86;UBERON:0000073!4.38e-74!94;UBERON:0001016!4.38e-74!94;UBERON:0002616!6.52e-71!59;UBERON:0002780!9.12e-67!41;UBERON:0001890!9.12e-67!41;UBERON:0006240!9.12e-67!41;UBERON:0000955!5.66e-66!69;UBERON:0006238!5.66e-66!69;UBERON:0003080!6.63e-65!42;UBERON:0001893!1.45e-58!34;UBERON:0002020!1.75e-58!34;UBERON:0003528!1.75e-58!34;UBERON:0002791!1.18e-56!33;UBERON:0001869!1.08e-55!32;UBERON:0003075!1.12e-54!86;UBERON:0007284!1.12e-54!86;UBERON:0002346!1.60e-51!90;UBERON:0000956!1.97e-44!25;UBERON:0000203!1.97e-44!25;UBERON:0002619!3.94e-44!22;UBERON:0003056!4.47e-43!61;UBERON:0001950!1.79e-40!20;UBERON:0007023!6.56e-37!115;UBERON:0004121!4.88e-36!169;UBERON:0000924!8.98e-35!173;UBERON:0006601!8.98e-35!173;UBERON:0000153!8.76e-34!129;UBERON:0007811!8.76e-34!129;UBERON:0000033!2.83e-33!123;UBERON:0003076!3.45e-19!15;UBERON:0003057!3.45e-19!15;UBERON:0000025!4.06e-18!194;UBERON:0001871!5.51e-16!7;UBERON:0002420!1.11e-15!9;UBERON:0007245!1.11e-15!9;UBERON:0010009!1.11e-15!9;UBERON:0010011!1.11e-15!9;UBERON:0000454!1.11e-15!9;UBERON:0002308!3.50e-15!9;UBERON:0000125!3.50e-15!9;UBERON:0004733!1.35e-14!12;UBERON:0002028!1.35e-14!12;UBERON:0007277!1.35e-14!12;UBERON:0000064!6.09e-14!219;UBERON:0004732!2.74e-13!13;UBERON:0000200!6.52e-13!6;UBERON:0009663!4.65e-12!7;UBERON:0004111!1.30e-11!241;UBERON:0001872!5.35e-11!5;UBERON:0002021!5.35e-11!5;UBERON:0002298!5.76e-11!8;UBERON:0000349!1.26e-10!5;UBERON:0002680!4.91e-10!9;UBERON:0001895!4.91e-10!9;UBERON:0010092!4.91e-10!9;UBERON:0000483!6.34e-10!309;UBERON:0000119!1.12e-09!312;UBERON:0000477!1.20e-09!286;UBERON:0001894!1.51e-09!7;UBERON:0006222!1.51e-09!7;UBERON:0000369!6.34e-08!4;UBERON:0002435!6.34e-08!4;UBERON:0000204!6.34e-08!4;UBERON:0010082!6.34e-08!4;UBERON:0000062!2.40e-07!511;UBERON:0002771!2.66e-07!3;UBERON:0000475!5.44e-07!365 | |ontology_enrichment_uberon=UBERON:0001049!6.33e-84!57;UBERON:0005068!6.33e-84!57;UBERON:0006241!6.33e-84!57;UBERON:0007135!6.33e-84!57;UBERON:0001017!2.06e-76!82;UBERON:0005743!2.00e-74!86;UBERON:0000073!4.38e-74!94;UBERON:0001016!4.38e-74!94;UBERON:0002616!6.52e-71!59;UBERON:0002780!9.12e-67!41;UBERON:0001890!9.12e-67!41;UBERON:0006240!9.12e-67!41;UBERON:0000955!5.66e-66!69;UBERON:0006238!5.66e-66!69;UBERON:0003080!6.63e-65!42;UBERON:0001893!1.45e-58!34;UBERON:0002020!1.75e-58!34;UBERON:0003528!1.75e-58!34;UBERON:0002791!1.18e-56!33;UBERON:0001869!1.08e-55!32;UBERON:0003075!1.12e-54!86;UBERON:0007284!1.12e-54!86;UBERON:0002346!1.60e-51!90;UBERON:0000956!1.97e-44!25;UBERON:0000203!1.97e-44!25;UBERON:0002619!3.94e-44!22;UBERON:0003056!4.47e-43!61;UBERON:0001950!1.79e-40!20;UBERON:0007023!6.56e-37!115;UBERON:0004121!4.88e-36!169;UBERON:0000924!8.98e-35!173;UBERON:0006601!8.98e-35!173;UBERON:0000153!8.76e-34!129;UBERON:0007811!8.76e-34!129;UBERON:0000033!2.83e-33!123;UBERON:0003076!3.45e-19!15;UBERON:0003057!3.45e-19!15;UBERON:0000025!4.06e-18!194;UBERON:0001871!5.51e-16!7;UBERON:0002420!1.11e-15!9;UBERON:0007245!1.11e-15!9;UBERON:0010009!1.11e-15!9;UBERON:0010011!1.11e-15!9;UBERON:0000454!1.11e-15!9;UBERON:0002308!3.50e-15!9;UBERON:0000125!3.50e-15!9;UBERON:0004733!1.35e-14!12;UBERON:0002028!1.35e-14!12;UBERON:0007277!1.35e-14!12;UBERON:0000064!6.09e-14!219;UBERON:0004732!2.74e-13!13;UBERON:0000200!6.52e-13!6;UBERON:0009663!4.65e-12!7;UBERON:0004111!1.30e-11!241;UBERON:0001872!5.35e-11!5;UBERON:0002021!5.35e-11!5;UBERON:0002298!5.76e-11!8;UBERON:0000349!1.26e-10!5;UBERON:0002680!4.91e-10!9;UBERON:0001895!4.91e-10!9;UBERON:0010092!4.91e-10!9;UBERON:0000483!6.34e-10!309;UBERON:0000119!1.12e-09!312;UBERON:0000477!1.20e-09!286;UBERON:0001894!1.51e-09!7;UBERON:0006222!1.51e-09!7;UBERON:0000369!6.34e-08!4;UBERON:0002435!6.34e-08!4;UBERON:0000204!6.34e-08!4;UBERON:0010082!6.34e-08!4;UBERON:0000062!2.40e-07!511;UBERON:0002771!2.66e-07!3;UBERON:0000475!5.44e-07!365 | ||
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|short_description=p3@ELAVL4 | |short_description=p3@ELAVL4 | ||
}} | }} |
Latest revision as of 10:49, 18 September 2015
Short description: | p3@ELAVL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ELAVL4_5end |
Coexpression cluster: | C2589_neuroblastoma_occipital_small_medial_amygdala_frontal_parietal |
Association with transcript: | -2bp_to_ENST00000494555_5end |
EntrezGene: | ELAVL4 |
HGNC: | 3315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.36e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.52e-08 | 6 |