FFCP PHASE1:Hg19::chr4:72052646..72052664,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11030 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6R1,A5JJ20 | |||
|association_with_transcript=-338bp_to_ENST00000264485,ENST00000425175,NM_001098484,NM_001134742,uc003hfy.2,uc010iib.2,uc010iic.2_5end | |||
|cluster_id=chr4:72052646..72052664,+ | |||
|coexpression_cluster_id=C2276 | |||
|description=CAGE_peak_5_at_SLC4A4_5end | |||
|id=chr4:72052646..72052664,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.93e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.53e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.58e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.20e-09;3!UBERON:0003057;6.20e-09;3!UBERON:0005754;1.03e-07;1!UBERON:0006242;2.57e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.12e-27!82;UBERON:0000073!5.18e-26!94;UBERON:0001016!5.18e-26!94;UBERON:0005743!7.06e-26!86;UBERON:0001049!4.97e-23!57;UBERON:0005068!4.97e-23!57;UBERON:0006241!4.97e-23!57;UBERON:0007135!4.97e-23!57;UBERON:0007023!2.78e-22!115;UBERON:0002616!5.00e-21!59;UBERON:0000955!1.77e-19!69;UBERON:0006238!1.77e-19!69;UBERON:0002780!1.14e-17!41;UBERON:0001890!1.14e-17!41;UBERON:0006240!1.14e-17!41;UBERON:0003080!5.49e-17!42;UBERON:0001893!1.77e-16!34;UBERON:0002020!2.48e-16!34;UBERON:0003528!2.48e-16!34;UBERON:0003075!5.31e-16!86;UBERON:0007284!5.31e-16!86;UBERON:0002791!1.02e-15!33;UBERON:0001869!5.12e-15!32;UBERON:0002346!1.44e-14!90;UBERON:0002619!4.94e-12!22;UBERON:0001950!5.04e-12!20;UBERON:0003056!1.06e-11!61;UBERON:0000956!4.46e-11!25;UBERON:0000203!4.46e-11!25;UBERON:0004121!4.12e-10!169;UBERON:0000924!1.92e-09!173;UBERON:0006601!1.92e-09!173;UBERON:0000153!6.85e-09!129;UBERON:0007811!6.85e-09!129;UBERON:0000033!1.54e-08!123;UBERON:0003076!2.89e-07!15;UBERON:0003057!2.89e-07!15;UBERON:0002308!6.34e-07!9;UBERON:0000125!6.34e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.53e-14;2!UBERON:0001872;8.17e-12;5!UBERON:0001950;4.68e-10;20!UBERON:0001017;1.05e-09;75!UBERON:0002298;1.51e-09;6!UBERON:0001016;2.67e-09;83!UBERON:0000073;3.69e-09;53!UBERON:0002616;3.69e-09;53!UBERON:0002619;3.92e-09;22!UBERON:0001896;6.20e-09;3!UBERON:0002240;6.20e-09;3!UBERON:0005174;6.20e-09;3!UBERON:0005290;6.20e-09;3!UBERON:0001137;6.20e-09;3!UBERON:0004733;3.67e-08;12!UBERON:0002028;3.67e-08;12!UBERON:0000956;5.17e-08;25!UBERON:0000203;5.17e-08;25!UBERON:0000998;1.03e-07;1!UBERON:0006868;1.03e-07;1!UBERON:0002780;1.34e-07;41!UBERON:0001890;1.34e-07;41!UBERON:0004732;1.53e-07;13!UBERON:0003296;1.89e-07;4!UBERON:0010133;1.89e-07;4!UBERON:0003112;2.57e-07;1!UBERON:0002171;2.57e-07;1!UBERON:0011158;2.57e-07;1!UBERON:0006518;2.57e-07;1!UBERON:0008949;2.57e-07;1!UBERON:0000101;2.57e-07;1!UBERON:0003128;2.57e-07;1!UBERON:0002167;2.57e-07;1!UBERON:0001703;2.57e-07;1!UBERON:0002241;2.57e-07;1!UBERON:0000955;3.07e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-20,81;UBERON:0001016,4.95e-20,89;UBERON:0001049,4.38e-18,56;UBERON:0005068,4.38e-18,56;UBERON:0006241,4.38e-18,56;UBERON:0007135,4.38e-18,56;UBERON:0000007,4.55e-14,2;UBERON:0000073,4.71e-14,53;UBERON:0002616,4.71e-14,53;UBERON:0003076,8.79e-14,15;UBERON:0003057,8.79e-14,15;UBERON:0000955,2.98e-12,68;UBERON:0006238,2.98e-12,68;UBERON:0001872,6.22e-12,5;UBERON:0007023,7.17e-12,114;UBERON:0011216,8.78e-12,223;UBERON:0003075,1.53e-11,82;UBERON:0007284,1.53e-11,82;UBERON:0002346,6.96e-11,86;UBERON:0001950,5.22e-10,20;UBERON:0010371,5.48e-10,104;UBERON:0004121,6.42e-10,171;UBERON:0000924,6.42e-10,171;UBERON:0006601,6.42e-10,171;UBERON:0002298,1.29e-09,6;UBERON:0002619,4.33e-09,22;UBERON:0001896,5.51e-09,3;UBERON:0005290,5.51e-09,3;UBERON:0010096,5.51e-09,3;UBERON:0002240,1.09e-08,3;UBERON:0005174,1.09e-08,3;UBERON:0001137,1.09e-08,3;UBERON:0002780,2.60e-08,41;UBERON:0001890,2.60e-08,41;UBERON:0003080,2.60e-08,41;UBERON:0006240,2.60e-08,41;UBERON:0004733,3.21e-08,12;UBERON:0002028,3.21e-08,12;UBERON:0007277,3.21e-08,12;UBERON:0000956,5.63e-08,25;UBERON:0000203,5.63e-08,25;UBERON:0003528,1.01e-07,34;UBERON:0002020,1.01e-07,34;UBERON:0000998,1.25e-07,1;UBERON:0006868,1.25e-07,1;UBERON:0004732,1.35e-07,13;UBERON:0003296,1.89e-07,4;UBERON:0010133,1.89e-07,4;UBERON:0003112,2.83e-07,1;UBERON:0011158,2.83e-07,1;UBERON:0003128,2.83e-07,1;UBERON:0001703,2.83e-07,1;UBERON:0002241,2.83e-07,1;UBERON:0004761,2.83e-07,1;UBERON:0009617,2.83e-07,1;UBERON:0002171,3.01e-07,1;UBERON:0006518,3.01e-07,1;UBERON:0008949,3.01e-07,1;UBERON:0000101,3.01e-07,1;UBERON:0002167,3.01e-07,1;UBERON:0010314,3.08e-07,132 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0.434539556882471,1.5905718941022,0,0,0.443458794925128,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0,0.717558542755448,0,0,0.300091096084402,0,0.515281080091258,0.18611685633159,0.843881661206331,0.389748020644795,0.504867548488229,0.276149695926898,0,0.710019185033229,0.10075209822764,0,0,0,0,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,5.08189248444927,2.60279707715243,0,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0,0.206768026122887,0,0,0,0,0,0.744323423456331,0.306923946576125,0,0.384417447767103,0,0.160853921143607,0,0.462629081407967,0.177561725313127,0.164254312027618,0,0.813472649219715,0.241718899183244,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.495056999523528,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0.818999468447914,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.478278818186467,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0.844016498463076,0,0,9.50064336575971,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0,0,0.885741385813839,0.964771509003264,1.52581736317083,0.331737779793674,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0.973033209536731,1.22206028986725,0,0,0,0.808813595768125,0,0.937057782901357,0,0,0,0.394584402849391,0,2.44858209304392,0.695052375913368,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0.176512253383001,0,0,0,0.696418755514666,0,0,1.49417096317547,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0.78741985211799,0,0,0.817220436669454,0.482259445395058,0.550157746388935,0.83088067605837,0.2249738915515,0,0.485996453264197,0,0.472834243795189,0.891727998294968,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.340776043570843,0,0.293104467356165,0,1.55139547633861,0.26446520348538,0,0,0.106787412567695,0.314408610199332,1.24271716604159,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0.732157589411779,0.1251909307065,1.72022758707021,0.887432412294818,1.24192805882767,0.138348634936231,0,0,0,0,0,1.88397337194073,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0,0.449803112163605,0,0,0.265841714557995,1.5652351854352,0.601030435988874,0,0,0.545545977607678,0,0.464033759878494,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037175893,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0,0,0,0.107824811396682,2.20172318598255,0,0,0,0,0.558644917973244,0.954013051960256,0,0,0,0.3062454773532,0.706521476061055,0,0.798169295285756,1.23069818544453,1.00828678488687,0.96820153449905,1.29180516505481,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0.655087670040387,0,0.607838261565552,2.34323429584154,1.65349437200947,0.317079050969534,2.7348740450911,0,0,0,0.638812138197976,0,0,10.9253808762594,8.65116327134931,0.266107110487916,0.115233987555779,0,0.475788130837822,0.657727735628491,0.118193840883968,0,0.470958557103084,0.628462359664008,0,1.82631744101899,0.431855182437243,1.43325506366115,0.500335809236594,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,2.11693525095465,0,0,0,0,0,0.365753774946808,0,0,0,0.485710993059139,0,0,0,0,0,0,2.39239890134628,0,0,0,0,1.17785080268967,1.18818560130834,0,0.339854229375634,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.430018749454354,0,0.611923411718232,0.872701380680755,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.23806443146374,0.129177819672012,0.434523000071005,0,0.25458863311266,0.202117188958219,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p5@SLC4A4 | |||
}} |
Latest revision as of 11:48, 18 September 2015
Short description: | p5@SLC4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC4A4_5end |
Coexpression cluster: | C2276_anaplastic_pituitary_locus_skeletal_tongue_diaphragm_neuroblastoma |
Association with transcript: | -338bp_to_ENST00000264485, ENST00000425175, NM_001098484, NM_001134742, uc003hfy.2, uc010iib.2, uc010iic.2_5end |
EntrezGene: | SLC4A4 |
HGNC: | 11030 |
UniProt: | Q9Y6R1A5JJ20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.58e-07 | 8 |