FFCP PHASE1:Hg19::chr1:167905372..167905384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25874 | |EntrezGene=25874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24515 | |HGNC=24515 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001ges.2_5end | |association_with_transcript=0bp_to_uc001ges.2_5end | ||
|cluster_id=chr1:167905372..167905384,- | |||
|description=CAGE_peak_5_at_BRP44_5end | |description=CAGE_peak_5_at_BRP44_5end | ||
|id=chr1:167905372..167905384,- | |id=chr1:167905372..167905384,- | ||
|ontology_enrichment_celltype=CL:0000557!1.71e-17!71;CL:0000763!8.60e-17!112;CL:0000049!8.60e-17!112;CL:0000839!9.75e-17!70;CL:0002009!1.07e-16!65;CL:0000766!1.24e-16!76;CL:0002194!7.97e-16!63;CL:0000576!7.97e-16!63;CL:0000040!7.97e-16!63;CL:0000559!7.97e-16!63;CL:0000988!1.29e-13!182;CL:0002057!1.38e-13!42;CL:0000037!1.49e-13!172;CL:0000566!1.49e-13!172;CL:0000738!1.05e-12!140;CL:0002032!6.19e-12!165;CL:0000837!6.19e-12!165;CL:0000860!9.95e-12!45;CL:0002031!4.46e-11!124;CL:0002087!5.29e-10!119 | |ontology_enrichment_celltype=CL:0000557!1.71e-17!71;CL:0000763!8.60e-17!112;CL:0000049!8.60e-17!112;CL:0000839!9.75e-17!70;CL:0002009!1.07e-16!65;CL:0000766!1.24e-16!76;CL:0002194!7.97e-16!63;CL:0000576!7.97e-16!63;CL:0000040!7.97e-16!63;CL:0000559!7.97e-16!63;CL:0000988!1.29e-13!182;CL:0002057!1.38e-13!42;CL:0000037!1.49e-13!172;CL:0000566!1.49e-13!172;CL:0000738!1.05e-12!140;CL:0002032!6.19e-12!165;CL:0000837!6.19e-12!165;CL:0000860!9.95e-12!45;CL:0002031!4.46e-11!124;CL:0002087!5.29e-10!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.31e-13;39!CL:0000234;1.31e-13;39!CL:0000576;5.86e-12;48!CL:0000766;2.89e-11;69!CL:0000860;3.86e-11;33!CL:0002057;3.86e-11;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.35e-24,48;CL:0000234,4.35e-24,48;CL:0002009,7.80e-24,61;CL:0000766,9.19e-24,72;CL:0002194,3.79e-23,59;CL:0000576,3.79e-23,59;CL:0000040,3.79e-23,59;CL:0000559,3.79e-23,59;CL:0000557,5.36e-22,67;CL:0000839,7.97e-21,66;CL:0000860,1.37e-19,42;CL:0002057,1.37e-19,42;CL:0000763,4.09e-19,108;CL:0000049,4.09e-19,108;CL:0000738,2.13e-16,136;CL:0000037,3.79e-15,168;CL:0002087,8.16e-15,115;CL:0000988,2.11e-14,177;CL:0002032,4.29e-14,161;CL:0000837,4.29e-14,161;CL:0002031,1.03e-13,120;CL:0002393,6.16e-09,9;CL:0002397,6.16e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.49e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.95e-16!102;UBERON:0003061!1.95e-16!102;UBERON:0002193!3.69e-16!112;UBERON:0007023!1.18e-15!115;UBERON:0001474!1.54e-13!86;UBERON:0002371!2.04e-13!80;UBERON:0001049!3.50e-13!57;UBERON:0005068!3.50e-13!57;UBERON:0006241!3.50e-13!57;UBERON:0007135!3.50e-13!57;UBERON:0001017!4.48e-13!82;UBERON:0005743!2.15e-12!86;UBERON:0000073!2.17e-12!94;UBERON:0001016!2.17e-12!94;UBERON:0000955!8.24e-11!69;UBERON:0006238!8.24e-11!69;UBERON:0002616!4.63e-10!59;UBERON:0004765!9.14e-10!101;UBERON:0001434!9.14e-10!101;UBERON:0003080!9.71e-10!42;UBERON:0002780!1.80e-09!41;UBERON:0001890!1.80e-09!41;UBERON:0006240!1.80e-09!41;UBERON:0001893!1.92e-09!34;UBERON:0002346!2.62e-09!90;UBERON:0002020!3.29e-09!34;UBERON:0003528!3.29e-09!34;UBERON:0002791!5.62e-09!33;UBERON:0003075!9.00e-09!86;UBERON:0007284!9.00e-09!86;UBERON:0002405!1.18e-08!115;UBERON:0001869!2.54e-08!32;UBERON:0002619!1.08e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.25e-10;34!UBERON:0003528;3.51e-10;34!UBERON:0002020;3.51e-10;34!UBERON:0002619;5.80e-10;22!UBERON:0001869;1.56e-09;32!UBERON:0002791;1.64e-09;32!UBERON:0000073;2.53e-09;53!UBERON:0002616;2.53e-09;53!UBERON:0002780;3.19e-09;41!UBERON:0001890;3.19e-09;41!UBERON:0000956;2.08e-08;25!UBERON:0000203;2.08e-08;25!UBERON:0001950;7.86e-08;20!UBERON:0001016;3.98e-07;83 | |||
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| ||
|short_description=p5@BRP44 | |short_description=p5@BRP44 | ||
}} | }} |
Latest revision as of 11:50, 18 September 2015
Short description: | p5@BRP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BRP44_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001ges.2_5end |
EntrezGene: | BRP44 |
HGNC: | 24515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.35e-24 | 48 |
phagocyte | 4.35e-24 | 48 |
macrophage dendritic cell progenitor | 7.80e-24 | 61 |
myeloid leukocyte | 9.19e-24 | 72 |
monopoietic cell | 3.79e-23 | 59 |
monocyte | 3.79e-23 | 59 |
monoblast | 3.79e-23 | 59 |
promonocyte | 3.79e-23 | 59 |
granulocyte monocyte progenitor cell | 5.36e-22 | 67 |
myeloid lineage restricted progenitor cell | 7.97e-21 | 66 |
classical monocyte | 1.37e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-19 | 42 |
myeloid cell | 4.09e-19 | 108 |
common myeloid progenitor | 4.09e-19 | 108 |
leukocyte | 2.13e-16 | 136 |
hematopoietic stem cell | 3.79e-15 | 168 |
nongranular leukocyte | 8.16e-15 | 115 |
hematopoietic cell | 2.11e-14 | 177 |
hematopoietic oligopotent progenitor cell | 4.29e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.29e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 1.03e-13 | 120 |
intermediate monocyte | 6.16e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.16e-09 | 9 |