FFCP PHASE1:Hg19::chr6:36355486..36355497,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51513 | |EntrezGene=51513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18160 | |HGNC=18160 | ||
|TSSclassifier=strong | |||
|UniProt=B4DVB6 | |UniProt=B4DVB6 | ||
|association_with_transcript=0bp_to_ENST00000538992_5end | |association_with_transcript=0bp_to_ENST00000538992_5end | ||
|cluster_id=chr6:36355486..36355497,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_3_at_ETV7_5end | |description=CAGE_peak_3_at_ETV7_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.61e-21!42;CL:0000860!2.35e-19!45;CL:0002194!2.02e-11!63;CL:0000576!2.02e-11!63;CL:0000040!2.02e-11!63;CL:0000559!2.02e-11!63;CL:0000839!6.97e-11!70;CL:0002009!8.82e-11!65;CL:0000557!1.36e-10!71;CL:0000766!3.95e-10!76;CL:0002031!1.43e-07!124;CL:0002087!2.50e-07!119 | |ontology_enrichment_celltype=CL:0002057!1.61e-21!42;CL:0000860!2.35e-19!45;CL:0002194!2.02e-11!63;CL:0000576!2.02e-11!63;CL:0000040!2.02e-11!63;CL:0000559!2.02e-11!63;CL:0000839!6.97e-11!70;CL:0002009!8.82e-11!65;CL:0000557!1.36e-10!71;CL:0000766!3.95e-10!76;CL:0002031!1.43e-07!124;CL:0002087!2.50e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-47;33!CL:0002057;1.62e-47;33!CL:0000473;7.31e-34;39!CL:0000234;7.31e-34;39!CL:0000576;1.03e-22;48!CL:0000766;3.07e-11;69!CL:0000763;2.61e-09;100!CL:0002087;8.93e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;1.62e-47;33!CL:0002057;1.62e-47;33!CL:0000473;7.31e-34;39!CL:0000234;7.31e-34;39!CL:0000576;1.03e-22;48!CL:0000766;3.07e-11;69!CL:0000763;2.61e-09;100!CL:0002087;8.93e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-41,42;CL:0002057,1.34e-41,42;CL:0000473,6.52e-36,48;CL:0000234,6.52e-36,48;CL:0002194,5.99e-28,59;CL:0000576,5.99e-28,59;CL:0000040,5.99e-28,59;CL:0000559,5.99e-28,59;CL:0002009,6.39e-27,61;CL:0000839,1.28e-24,66;CL:0000557,3.35e-24,67;CL:0000766,2.82e-22,72;CL:0002087,1.23e-19,115;CL:0002031,1.25e-18,120;CL:0000738,6.60e-16,136;CL:0000763,2.08e-15,108;CL:0000049,2.08e-15,108;CL:0002032,3.56e-14,161;CL:0000837,3.56e-14,161;CL:0000037,2.19e-13,168;CL:0000988,1.83e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-29;42 | |ontology_enrichment_development_v019=CL:0002057;1.19e-29;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.75e-07;1!DOID:0060061;2.75e-07;1!DOID:8691;2.75e-07;1 | |ontology_enrichment_disease_v019=DOID:0060060;2.75e-07;1!DOID:0060061;2.75e-07;1!DOID:8691;2.75e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.84e-07,1;DOID:0060061,2.84e-07,1;DOID:8691,2.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-09!102;UBERON:0003061!1.89e-09!102;UBERON:0002193!8.03e-09!112;UBERON:0002371!2.43e-08!80;UBERON:0001474!3.84e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!1.89e-09!102;UBERON:0003061!1.89e-09!102;UBERON:0002193!8.03e-09!112;UBERON:0002371!2.43e-08!80;UBERON:0001474!3.84e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-21,76;UBERON:0001474,4.02e-19,82;UBERON:0002390,2.66e-17,98;UBERON:0003061,2.66e-17,98;UBERON:0004765,4.24e-17,90;UBERON:0002405,1.98e-16,93;UBERON:0002193,2.44e-15,108;UBERON:0001434,5.06e-15,100;UBERON:0002204,1.06e-09,167;UBERON:0003081,3.49e-08,203 | |||
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|short_description=p3@ETV7 | |short_description=p3@ETV7 | ||
}} | }} |
Latest revision as of 12:17, 18 September 2015
Short description: | p3@ETV7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ETV7_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000538992_5end |
EntrezGene: | ETV7 |
HGNC: | 18160 |
UniProt: | B4DVB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.34e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-41 | 42 |
defensive cell | 6.52e-36 | 48 |
phagocyte | 6.52e-36 | 48 |
monopoietic cell | 5.99e-28 | 59 |
monocyte | 5.99e-28 | 59 |
monoblast | 5.99e-28 | 59 |
promonocyte | 5.99e-28 | 59 |
macrophage dendritic cell progenitor | 6.39e-27 | 61 |
myeloid lineage restricted progenitor cell | 1.28e-24 | 66 |
granulocyte monocyte progenitor cell | 3.35e-24 | 67 |
myeloid leukocyte | 2.82e-22 | 72 |
nongranular leukocyte | 1.23e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.25e-18 | 120 |
leukocyte | 6.60e-16 | 136 |
myeloid cell | 2.08e-15 | 108 |
common myeloid progenitor | 2.08e-15 | 108 |
hematopoietic oligopotent progenitor cell | 3.56e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.56e-14 | 161 |
hematopoietic stem cell | 2.19e-13 | 168 |
hematopoietic cell | 1.83e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-21 | 76 |
bone element | 4.02e-19 | 82 |
hematopoietic system | 2.66e-17 | 98 |
blood island | 2.66e-17 | 98 |
skeletal element | 4.24e-17 | 90 |
immune system | 1.98e-16 | 93 |
hemolymphoid system | 2.44e-15 | 108 |
skeletal system | 5.06e-15 | 100 |
musculoskeletal system | 1.06e-09 | 167 |
lateral plate mesoderm | 3.49e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.84e-07 | 1 |
cutaneous T cell lymphoma | 2.84e-07 | 1 |
mycosis fungoides | 2.84e-07 | 1 |