FFCP PHASE1:Hg19::chr19:45458261..45458274,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:45458261..45458274,+ to FFCP PHASE1:Hg19::chr19:45458261..45458274,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1209 | |EntrezGene=1209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2087 | |HGNC=2087 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8J3 | |UniProt=F5H8J3 | ||
|association_with_transcript=0bp_to_ENST00000541297,uc010xxg.1_5end | |||
|cluster_id=chr19:45458261..45458274,+ | |||
|description=CAGE_peak_4_at_CLPTM1_5end | |||
|id=chr19:45458261..45458274,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0002549;2.48e-10;2!CL:0002617;2.48e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.25e-19,1;CL:0002625,2.25e-19,1;CL:0000216,2.25e-19,1;CL:0002549,2.07e-10,2;CL:0002617,3.27e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.81e-20;1!UBERON:0009117;3.76e-08;10!UBERON:0005564;3.76e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.10e-15!41;UBERON:0001890!4.10e-15!41;UBERON:0006240!4.10e-15!41;UBERON:0002616!1.42e-14!59;UBERON:0003080!1.98e-14!42;UBERON:0001049!2.20e-13!57;UBERON:0005068!2.20e-13!57;UBERON:0006241!2.20e-13!57;UBERON:0007135!2.20e-13!57;UBERON:0001893!2.47e-13!34;UBERON:0002791!1.05e-12!33;UBERON:0000955!1.81e-12!69;UBERON:0006238!1.81e-12!69;UBERON:0001869!3.95e-12!32;UBERON:0002020!6.44e-12!34;UBERON:0003528!6.44e-12!34;UBERON:0007023!9.91e-12!115;UBERON:0003056!2.37e-11!61;UBERON:0003075!1.67e-10!86;UBERON:0007284!1.67e-10!86;UBERON:0002619!2.95e-10!22;UBERON:0002346!3.28e-10!90;UBERON:0005743!4.77e-10!86;UBERON:0001017!6.70e-10!82;UBERON:0000956!1.08e-09!25;UBERON:0000203!1.08e-09!25;UBERON:0000153!3.04e-09!129;UBERON:0007811!3.04e-09!129;UBERON:0000073!5.46e-09!94;UBERON:0001016!5.46e-09!94;UBERON:0000033!6.92e-09!123;UBERON:0001950!8.50e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.75e-21;8!UBERON:0001136;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0003135;2.37e-15;11!UBERON:0001905;2.48e-10;2!UBERON:0005629;2.48e-10;2!UBERON:0002757;2.48e-10;2!UBERON:0010134;2.48e-10;2!UBERON:0005358;2.48e-10;2!UBERON:0004909;2.48e-10;2!UBERON:0005408;2.48e-10;2!UBERON:0001886;2.48e-10;2!UBERON:0004086;2.48e-10;2!UBERON:0001899;2.48e-10;2!UBERON:0005282;2.48e-10;2!UBERON:0005281;2.48e-10;2!UBERON:0000991;2.44e-08;21!UBERON:0003101;5.52e-08;22!UBERON:0000079;5.52e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.52e-21,8;UBERON:0001136,2.25e-19,1;UBERON:0001343,2.25e-19,1;UBERON:0004910,2.25e-19,1;UBERON:0005154,2.25e-19,1;UBERON:0005295,2.25e-19,1;UBERON:0004813,2.25e-19,1;UBERON:0005297,2.25e-19,1;UBERON:0005294,2.25e-19,1;UBERON:0010141,2.25e-19,1;UBERON:0005891,2.25e-19,1;UBERON:0003135,1.85e-15,11;UBERON:0005629,2.07e-10,2;UBERON:0005358,2.07e-10,2;UBERON:0001886,2.07e-10,2;UBERON:0004086,2.07e-10,2;UBERON:0005282,2.07e-10,2;UBERON:0005281,2.07e-10,2;UBERON:0004909,2.27e-10,2;UBERON:0001905,2.99e-10,2;UBERON:0002757,2.99e-10,2;UBERON:0010134,2.99e-10,2;UBERON:0005408,2.99e-10,2;UBERON:0001899,2.99e-10,2;UBERON:0000991,2.16e-08,21;UBERON:0009196,2.16e-08,21;UBERON:0009117,2.16e-08,21;UBERON:0005564,2.16e-08,21;UBERON:0004176,4.89e-08,22;UBERON:0003101,4.89e-08,22;UBERON:0000079,4.89e-08,22 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.246301768349837,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0,1.89919659471683,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0.825354125820202,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0.357198913136319,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,1.72852777344,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0,0,0,0,0.246381468041427,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0.328014645699706,0,0.515205058238611,0.0915694648183434,0.165018999841176,0,0.650060246036521,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0,0.267096106940212,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.142283686696828,0,0,0.191505370132367,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.334330152832435,0.284136146806413,0,0,0.307160702099232,0.994147647766298,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,0.251932747854276,0.20453736500431,0.123084805461069,0.622079175323615,0,0.358042349351218,0,0,2.3948309234694,0,0,0.463840490809256,0,0,0.262379999988587,0,0,0.254253650292766,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.442317039724898,0,0.438770794307945,0.32681539055697,0.139423744278603,0.384751292518985,0.227884111694002,0.46112780877612,0.0897576444097721,0.108647371922008,0.31900115973192,0.183195186803725,0,1.02193298195737,0,0,0,0,0.167821586975843,0.37950746544837,0,0.210998064528027,0,0,0,0,0.265372693510018,0.611030144933625,0,0.247127877893006,0.104421949505455,0.337005664903385,0,0,0,0,0,0,0,0.30607276163049,0,0.751617097072463,0.518440956986236,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0.0967563312890851,0.292357268344742,0.246346371159628,0.290967049465258,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.569797163602908,0,0.320635281006135,0.426905989478705,0.19980960958213,0.144090417154106,0.80175617316141,0.171594997861965,0.288109595976299,0,0.235694034616795,0,0.209205692624666,0.101998217636322,0,0,0.410716136675979,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0,0,0.157566364614447,0.0824158583811665,0.26961417541674,0.590564889088493,0,0.795229689809303,0.681017030557878,0,0.137539436597234,0.415440338029185,0,0,0.425246896606173,0,0.236417121897595,0.262272940674991,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0.339936274560377,1.17241786942466,0,0,0.26446520348538,0.342173675768659,0,0.213574825135389,0.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| 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| ||
|short_description=p4@CLPTM1 | |||
}} | }} |
Latest revision as of 15:14, 18 September 2015
Short description: | p4@CLPTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLPTM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000541297, uc010xxg.1_5end |
EntrezGene: | CLPTM1 |
HGNC: | 2087 |
UniProt: | F5H8J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.25e-19 | 1 |
seminiferous tubule epithelial cell | 2.25e-19 | 1 |
Sertoli cell | 2.25e-19 | 1 |
fibroblast of choroid plexus | 2.07e-10 | 2 |
adipocyte of breast | 3.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 5.52e-21 | 8 |
mesothelium | 2.25e-19 | 1 |
seminiferous tubule of testis | 2.25e-19 | 1 |
epithelium of male gonad | 2.25e-19 | 1 |
epithelial cord | 2.25e-19 | 1 |
sex cord | 2.25e-19 | 1 |
seminiferous tubule epithelium | 2.25e-19 | 1 |
testis sex cord | 2.25e-19 | 1 |
genital ridge | 2.25e-19 | 1 |
primitive sex cord of indifferent gonad | 2.25e-19 | 1 |
coelomic epithelium | 2.25e-19 | 1 |
male reproductive organ | 1.85e-15 | 11 |
vascular plexus | 2.07e-10 | 2 |
ventricle of nervous system | 2.07e-10 | 2 |
choroid plexus | 2.07e-10 | 2 |
brain ventricle | 2.07e-10 | 2 |
ventricular system of brain | 2.07e-10 | 2 |
ventricular system of central nervous system | 2.07e-10 | 2 |
epithelium of gonad | 2.27e-10 | 2 |
pineal body | 2.99e-10 | 2 |
regional part of epithalamus | 2.99e-10 | 2 |
secretory circumventricular organ | 2.99e-10 | 2 |
circumventricular organ | 2.99e-10 | 2 |
epithalamus | 2.99e-10 | 2 |
gonad | 2.16e-08 | 21 |
indifferent external genitalia | 2.16e-08 | 21 |
indifferent gonad | 2.16e-08 | 21 |
gonad primordium | 2.16e-08 | 21 |
external genitalia | 4.89e-08 | 22 |
male organism | 4.89e-08 | 22 |
male reproductive system | 4.89e-08 | 22 |