FFCP PHASE1:Hg19::chr4:76439596..76439643,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25898 | |EntrezGene=25898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17479 | |HGNC=17479 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PM5,D6RAF6,E7ETW5,C7E542 | |UniProt=Q96PM5,D6RAF6,E7ETW5,C7E542 | ||
|association_with_transcript=0bp_to_ENST00000451788,ENST00000504085,ENST00000512706,ENST00000514589,NM_001008925,NM_001009922,NM_015436,NR_037913,NR_037914,uc003hij.2,uc003hik.2,uc003hil.2,uc010iip.2,uc010iiq.2,uc010iir.2_5end | |association_with_transcript=0bp_to_ENST00000451788,ENST00000504085,ENST00000512706,ENST00000514589,NM_001008925,NM_001009922,NM_015436,NR_037913,NR_037914,uc003hij.2,uc003hik.2,uc003hil.2,uc010iip.2,uc010iiq.2,uc010iir.2_5end | ||
|cluster_id=chr4:76439596..76439643,- | |||
|coexpression_cluster_id=C1055 | |coexpression_cluster_id=C1055 | ||
|description=CAGE_peak_2_at_RCHY1_5end | |description=CAGE_peak_2_at_RCHY1_5end | ||
|id=chr4:76439596..76439643,- | |id=chr4:76439596..76439643,- | ||
|ontology_enrichment_celltype=CL:0000037!3.59e-42!172;CL:0000566!3.59e-42!172;CL:0000988!1.03e-39!182;CL:0002032!1.47e-38!165;CL:0000837!1.47e-38!165;CL:0000738!2.22e-37!140;CL:0002087!2.37e-31!119;CL:0002031!3.64e-31!124;CL:0000542!2.64e-24!53;CL:0000051!2.64e-24!53;CL:0000838!6.88e-24!52;CL:0000763!9.51e-16!112;CL:0000049!9.51e-16!112;CL:0000791!1.30e-12!18;CL:0000789!1.30e-12!18;CL:0002420!1.30e-12!18;CL:0002419!1.30e-12!18;CL:0000790!1.30e-12!18;CL:0002057!2.59e-12!42;CL:0000084!2.82e-12!25;CL:0000827!2.82e-12!25;CL:0000766!1.13e-11!76;CL:0000945!5.38e-11!24;CL:0000826!5.38e-11!24;CL:0000860!2.64e-10!45;CL:0000839!2.95e-10!70;CL:0000557!1.04e-09!71;CL:0000236!5.54e-09!14;CL:0000625!1.06e-08!11;CL:0002194!1.98e-08!63;CL:0000576!1.98e-08!63;CL:0000040!1.98e-08!63;CL:0000559!1.98e-08!63;CL:0002009!3.99e-08!65 | |ontology_enrichment_celltype=CL:0000037!3.59e-42!172;CL:0000566!3.59e-42!172;CL:0000988!1.03e-39!182;CL:0002032!1.47e-38!165;CL:0000837!1.47e-38!165;CL:0000738!2.22e-37!140;CL:0002087!2.37e-31!119;CL:0002031!3.64e-31!124;CL:0000542!2.64e-24!53;CL:0000051!2.64e-24!53;CL:0000838!6.88e-24!52;CL:0000763!9.51e-16!112;CL:0000049!9.51e-16!112;CL:0000791!1.30e-12!18;CL:0000789!1.30e-12!18;CL:0002420!1.30e-12!18;CL:0002419!1.30e-12!18;CL:0000790!1.30e-12!18;CL:0002057!2.59e-12!42;CL:0000084!2.82e-12!25;CL:0000827!2.82e-12!25;CL:0000766!1.13e-11!76;CL:0000945!5.38e-11!24;CL:0000826!5.38e-11!24;CL:0000860!2.64e-10!45;CL:0000839!2.95e-10!70;CL:0000557!1.04e-09!71;CL:0000236!5.54e-09!14;CL:0000625!1.06e-08!11;CL:0002194!1.98e-08!63;CL:0000576!1.98e-08!63;CL:0000040!1.98e-08!63;CL:0000559!1.98e-08!63;CL:0002009!3.99e-08!65 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.66e-14;53!CL:0000791;6.77e-13;18!CL:0000789;6.77e-13;18!CL:0002419;6.77e-13;18!CL:0000084;1.76e-12;25!CL:0000945;3.71e-11;24!CL:0002087;3.83e-11;104!CL:0000860;3.00e-09;33!CL:0002057;3.00e-09;33!CL:0000625;7.28e-09;11!CL:0000236;1.21e-08;13!CL:0000738;1.55e-08;136!CL:0000988;6.14e-08;177!CL:0000576;9.30e-08;48!CL:0000473;6.40e-07;39!CL:0000234;6.40e-07;39!CL:0000766;6.90e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.87e-45,168;CL:0000988,2.71e-42,177;CL:0002032,4.01e-41,161;CL:0000837,4.01e-41,161;CL:0000738,3.18e-40,136;CL:0002087,5.25e-34,115;CL:0002031,9.76e-34,120;CL:0000542,1.91e-24,53;CL:0000051,1.91e-24,53;CL:0000838,5.01e-24,52;CL:0000763,1.74e-17,108;CL:0000049,1.74e-17,108;CL:0000766,1.64e-13,72;CL:0000791,1.11e-12,18;CL:0000789,1.11e-12,18;CL:0002420,1.11e-12,18;CL:0002419,1.11e-12,18;CL:0000790,1.11e-12,18;CL:0000860,2.22e-12,42;CL:0002057,2.22e-12,42;CL:0000084,2.42e-12,25;CL:0000827,2.42e-12,25;CL:0000839,6.32e-12,66;CL:0000557,2.68e-11,67;CL:0000945,4.71e-11,24;CL:0000826,4.71e-11,24;CL:0000473,1.05e-10,48;CL:0000234,1.05e-10,48;CL:0002194,5.61e-10,59;CL:0000576,5.61e-10,59;CL:0000040,5.61e-10,59;CL:0000559,5.61e-10,59;CL:0002009,1.34e-09,61;CL:0000236,4.99e-09,14;CL:0000625,9.61e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.66e-14;53!CL:0000790;6.77e-13;18!CL:0002057;1.79e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-31!115;UBERON:0001049!2.01e-17!57;UBERON:0005068!2.01e-17!57;UBERON:0006241!2.01e-17!57;UBERON:0007135!2.01e-17!57;UBERON:0002390!7.54e-16!102;UBERON:0003061!7.54e-16!102;UBERON:0002616!3.91e-15!59;UBERON:0002193!4.54e-15!112;UBERON:0003080!2.07e-14!42;UBERON:0002780!2.14e-14!41;UBERON:0001890!2.14e-14!41;UBERON:0006240!2.14e-14!41;UBERON:0002020!2.67e-13!34;UBERON:0003528!2.67e-13!34;UBERON:0001893!8.78e-13!34;UBERON:0001017!1.54e-12!82;UBERON:0002791!1.80e-12!33;UBERON:0001869!4.33e-12!32;UBERON:0000955!1.03e-11!69;UBERON:0006238!1.03e-11!69;UBERON:0005743!1.84e-11!86;UBERON:0002619!1.41e-10!22;UBERON:0000073!2.66e-10!94;UBERON:0001016!2.66e-10!94;UBERON:0000956!1.24e-09!25;UBERON:0000203!1.24e-09!25;UBERON:0001950!1.28e-09!20;UBERON:0002371!2.15e-08!80;UBERON:0003075!2.97e-08!86;UBERON:0007284!2.97e-08!86;UBERON:0000178!3.37e-08!15;UBERON:0000179!3.37e-08!15;UBERON:0000463!3.37e-08!15;UBERON:0002346!5.63e-08!90;UBERON:0001474!2.52e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.70e-31!115;UBERON:0001049!2.01e-17!57;UBERON:0005068!2.01e-17!57;UBERON:0006241!2.01e-17!57;UBERON:0007135!2.01e-17!57;UBERON:0002390!7.54e-16!102;UBERON:0003061!7.54e-16!102;UBERON:0002616!3.91e-15!59;UBERON:0002193!4.54e-15!112;UBERON:0003080!2.07e-14!42;UBERON:0002780!2.14e-14!41;UBERON:0001890!2.14e-14!41;UBERON:0006240!2.14e-14!41;UBERON:0002020!2.67e-13!34;UBERON:0003528!2.67e-13!34;UBERON:0001893!8.78e-13!34;UBERON:0001017!1.54e-12!82;UBERON:0002791!1.80e-12!33;UBERON:0001869!4.33e-12!32;UBERON:0000955!1.03e-11!69;UBERON:0006238!1.03e-11!69;UBERON:0005743!1.84e-11!86;UBERON:0002619!1.41e-10!22;UBERON:0000073!2.66e-10!94;UBERON:0001016!2.66e-10!94;UBERON:0000956!1.24e-09!25;UBERON:0000203!1.24e-09!25;UBERON:0001950!1.28e-09!20;UBERON:0002371!2.15e-08!80;UBERON:0003075!2.97e-08!86;UBERON:0007284!2.97e-08!86;UBERON:0000178!3.37e-08!15;UBERON:0000179!3.37e-08!15;UBERON:0000463!3.37e-08!15;UBERON:0002346!5.63e-08!90;UBERON:0001474!2.52e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.91e-12;34!UBERON:0002020;7.91e-12;34!UBERON:0002791;2.04e-11;32!UBERON:0001893;2.40e-11;34!UBERON:0001869;2.43e-11;32!UBERON:0002780;7.22e-11;41!UBERON:0001890;7.22e-11;41!UBERON:0002619;7.37e-11;22!UBERON:0000073;4.35e-10;53!UBERON:0002616;4.35e-10;53!UBERON:0000956;5.52e-10;25!UBERON:0000203;5.52e-10;25!UBERON:0001950;6.98e-10;20!UBERON:0007023;3.26e-09;114!UBERON:0000178;2.32e-08;15!UBERON:0000179;2.32e-08;15!UBERON:0000463;2.32e-08;15 | |||
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| ||
|short_description=p2@RCHY1 | |short_description=p2@RCHY1 | ||
}} | }} |
Latest revision as of 16:16, 18 September 2015
Short description: | p2@RCHY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RCHY1_5end |
Coexpression cluster: | C1055_CD19_thymus_CD4_CD8_Neutrophils_Natural_cerebellum |
Association with transcript: | 0bp_to_ENST00000451788, ENST00000504085, ENST00000512706, ENST00000514589, NM_001008925, NM_001009922, NM_015436, NR_037913, NR_037914, uc003hij.2, uc003hik.2, uc003hil.2, uc010iip.2, uc010iiq.2, uc010iir.2_5end |
EntrezGene: | RCHY1 |
HGNC: | 17479 |
UniProt: | Q96PM5D6RAF6E7ETW5C7E542 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data