FFCP PHASE1:Hg19::chr11:61568644..61568661,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61568644..61568661,- to FFCP PHASE1:Hg19::chr11:61568644..61568661,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3992 | |EntrezGene=3992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3574 | |HGNC=3574 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2H3 | |UniProt=Q9H2H3 | ||
|association_with_transcript=-338bp_to_AF271778_5end | |||
|cluster_id=chr11:61568644..61568661,- | |||
|description=CAGE_peak_17_at_FADS1_5end | |||
|id=chr11:61568644..61568661,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;7.50e-27;3!CL:0000136;8.03e-17;13!CL:0002590;9.35e-13;3!CL:0002616;5.53e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,3.89e-27,3;CL:0000136,9.47e-15,15;CL:0002590,5.85e-13,3;CL:0002616,2.84e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;7.50e-27;3!UBERON:0002072;2.26e-16;5!UBERON:0001013;3.39e-10;14!UBERON:0005284;5.30e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.89e-27,3;UBERON:0002072,1.53e-16,5;UBERON:0001013,2.36e-10,14;UBERON:0005284,4.01e-08,5 | |||
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| ||
|short_description=p17@FADS1 | |||
}} | }} |
Latest revision as of 16:57, 18 September 2015
Short description: | p17@FADS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_FADS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -338bp_to_AF271778_5end |
EntrezGene: | FADS1 |
HGNC: | 3574 |
UniProt: | Q9H2H3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 3.89e-27 | 3 |
fat cell | 9.47e-15 | 15 |
smooth muscle cell of the brain vasculature | 5.85e-13 | 3 |
perirenal adipocyte cell | 2.84e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.89e-27 | 3 |
hypodermis | 1.53e-16 | 5 |
adipose tissue | 2.36e-10 | 14 |
brain vasculature | 4.01e-08 | 5 |