FFCP PHASE1:Hg19::chr8:62200509..62200590,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157807 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23139 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IUQ0,G3V122,E5RJ00 | |||
|association_with_transcript=0bp_to_ENST00000325897,ENST00000518592,ENST00000519846,ENST00000521189,ENST00000523868,NM_173519,uc003xug.2,uc003xuh.2,uc003xui.2,uc010lyp.2_5end | |||
|cluster_id=chr8:62200509..62200590,+ | |||
|coexpression_cluster_id=C3355 | |||
|description=CAGE_peak_1_at_CLVS1_5end | |||
|id=chr8:62200509..62200590,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.24e-08!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.64e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.37e-21;82!UBERON:0006215;2.95e-09;3!UBERON:0006241;1.96e-07;3!UBERON:0003057;1.96e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.49e-83!82;UBERON:0005743!4.75e-81!86;UBERON:0001049!1.17e-79!57;UBERON:0005068!1.17e-79!57;UBERON:0006241!1.17e-79!57;UBERON:0007135!1.17e-79!57;UBERON:0000073!2.87e-79!94;UBERON:0001016!2.87e-79!94;UBERON:0002616!4.83e-70!59;UBERON:0000955!1.65e-67!69;UBERON:0006238!1.65e-67!69;UBERON:0002780!3.85e-63!41;UBERON:0001890!3.85e-63!41;UBERON:0006240!3.85e-63!41;UBERON:0003080!2.33e-61!42;UBERON:0003075!7.12e-58!86;UBERON:0007284!7.12e-58!86;UBERON:0002346!1.56e-54!90;UBERON:0001893!4.40e-51!34;UBERON:0002020!5.23e-51!34;UBERON:0003528!5.23e-51!34;UBERON:0002791!2.60e-49!33;UBERON:0001869!3.40e-48!32;UBERON:0007023!1.22e-43!115;UBERON:0003056!1.06e-42!61;UBERON:0004121!4.81e-41!169;UBERON:0000924!1.26e-39!173;UBERON:0006601!1.26e-39!173;UBERON:0002619!3.48e-38!22;UBERON:0000956!7.92e-36!25;UBERON:0000203!7.92e-36!25;UBERON:0000033!3.17e-35!123;UBERON:0001950!6.13e-35!20;UBERON:0000153!8.20e-33!129;UBERON:0007811!8.20e-33!129;UBERON:0000025!5.38e-19!194;UBERON:0003076!1.61e-18!15;UBERON:0003057!1.61e-18!15;UBERON:0002420!7.03e-17!9;UBERON:0007245!7.03e-17!9;UBERON:0010009!7.03e-17!9;UBERON:0010011!7.03e-17!9;UBERON:0000454!7.03e-17!9;UBERON:0002308!1.75e-16!9;UBERON:0000125!1.75e-16!9;UBERON:0004733!2.89e-14!12;UBERON:0002028!2.89e-14!12;UBERON:0007277!2.89e-14!12;UBERON:0009663!1.98e-13!7;UBERON:0001894!3.40e-13!7;UBERON:0006222!3.40e-13!7;UBERON:0004732!5.60e-13!13;UBERON:0000200!3.45e-12!6;UBERON:0004111!3.79e-12!241;UBERON:0001871!5.58e-12!7;UBERON:0000483!1.42e-10!309;UBERON:0002021!1.70e-10!5;UBERON:0002298!1.74e-10!8;UBERON:0001872!1.91e-10!5;UBERON:0000064!2.42e-10!219;UBERON:0000119!2.61e-10!312;UBERON:0000349!3.86e-10!5;UBERON:0002680!6.08e-10!9;UBERON:0001895!6.08e-10!9;UBERON:0010092!6.08e-10!9;UBERON:0000477!2.05e-09!286;UBERON:0000369!3.93e-09!4;UBERON:0002435!3.93e-09!4;UBERON:0000204!3.93e-09!4;UBERON:0010082!3.93e-09!4;UBERON:0003296!1.40e-08!4;UBERON:0010133!1.40e-08!4;UBERON:0000475!7.60e-08!365;UBERON:0005383!2.76e-07!3;UBERON:0005382!2.76e-07!3;UBERON:0000922!5.27e-07!612;UBERON:0002771!7.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.98e-57;41!UBERON:0001890;1.98e-57;41!UBERON:0001893;7.02e-55;34!UBERON:0003528;1.85e-54;34!UBERON:0002020;1.85e-54;34!UBERON:0000073;3.12e-54;53!UBERON:0002616;3.12e-54;53!UBERON:0001869;3.28e-54;32!UBERON:0002791;6.92e-54;32!UBERON:0002619;5.88e-51;22!UBERON:0001950;1.37e-46;20!UBERON:0000956;2.64e-44;25!UBERON:0000203;2.64e-44;25!UBERON:0001017;1.45e-39;75!UBERON:0000955;2.44e-38;68!UBERON:0001016;1.17e-33;83!UBERON:0002420;3.69e-22;9!UBERON:0007245;3.69e-22;9!UBERON:0010009;3.69e-22;9!UBERON:0010011;3.69e-22;9!UBERON:0000454;3.69e-22;9!UBERON:0000125;1.26e-21;9!UBERON:0002308;1.26e-21;9!UBERON:0009663;1.60e-17;7!UBERON:0001894;3.40e-17;7!UBERON:0000200;7.80e-16;6!UBERON:0004733;1.13e-15;12!UBERON:0002028;1.13e-15;12!UBERON:0004732;2.53e-14;13!UBERON:0002298;5.10e-14;6!UBERON:0002021;1.54e-13;5!UBERON:0001872;1.79e-13;5!UBERON:0001871;2.14e-13;6!UBERON:0007023;2.14e-13;114!UBERON:0000349;4.56e-13;5!UBERON:0011216;1.27e-12;132!UBERON:0000369;9.96e-12;4!UBERON:0002435;9.96e-12;4!UBERON:0000204;9.96e-12;4!UBERON:0003296;5.24e-11;4!UBERON:0010133;5.24e-11;4!UBERON:0002784;1.70e-10;4!UBERON:0002680;4.28e-10;9!UBERON:0001895;4.28e-10;9!UBERON:0005383;2.95e-09;3!UBERON:0005382;2.95e-09;3!UBERON:0001870;6.38e-09;3!UBERON:0000988;5.21e-08;3!UBERON:0001896;1.11e-07;3!UBERON:0005290;1.11e-07;3!UBERON:0002240;1.96e-07;3!UBERON:0005174;1.96e-07;3!UBERON:0001137;1.96e-07;3!UBERON:0010314;2.00e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.95e-102,56;UBERON:0005068,5.95e-102,56;UBERON:0006241,5.95e-102,56;UBERON:0007135,5.95e-102,56;UBERON:0001017,2.83e-99,81;UBERON:0000073,1.21e-95,53;UBERON:0002616,1.21e-95,53;UBERON:0001016,8.49e-95,89;UBERON:0000955,1.89e-84,68;UBERON:0006238,1.89e-84,68;UBERON:0002780,6.65e-81,41;UBERON:0001890,6.65e-81,41;UBERON:0003080,6.65e-81,41;UBERON:0006240,6.65e-81,41;UBERON:0003075,1.26e-65,82;UBERON:0007284,1.26e-65,82;UBERON:0001893,9.79e-65,34;UBERON:0003528,1.23e-64,34;UBERON:0002020,1.23e-64,34;UBERON:0002346,5.73e-62,86;UBERON:0001869,7.50e-61,32;UBERON:0002791,2.32e-60,32;UBERON:0010371,2.86e-51,104;UBERON:0003056,3.72e-51,61;UBERON:0002619,5.47e-51,22;UBERON:0001950,1.29e-46,20;UBERON:0004121,5.88e-46,171;UBERON:0000924,5.88e-46,171;UBERON:0006601,5.88e-46,171;UBERON:0000956,2.47e-44,25;UBERON:0000203,2.47e-44,25;UBERON:0007023,1.94e-41,114;UBERON:0011216,7.12e-40,223;UBERON:0010314,1.59e-37,132;UBERON:0000025,4.20e-25,192;UBERON:0002420,3.98e-22,9;UBERON:0007245,3.98e-22,9;UBERON:0010009,3.98e-22,9;UBERON:0010011,3.98e-22,9;UBERON:0000454,3.98e-22,9;UBERON:0000125,1.36e-21,9;UBERON:0002308,1.36e-21,9;UBERON:0003076,2.96e-21,15;UBERON:0003057,2.96e-21,15;UBERON:0009663,1.73e-17,7;UBERON:0004111,2.54e-17,240;UBERON:0001894,3.57e-17,7;UBERON:0006222,3.57e-17,7;UBERON:0000200,8.00e-16,6;UBERON:0004733,1.14e-15,12;UBERON:0002028,1.14e-15,12;UBERON:0007277,1.14e-15,12;UBERON:0004732,2.55e-14,13;UBERON:0002298,5.23e-14,6;UBERON:0002021,1.50e-13,5;UBERON:0001872,1.75e-13,5;UBERON:0001871,2.09e-13,6;UBERON:0000349,4.50e-13,5;UBERON:0000369,1.01e-11,4;UBERON:0002435,1.01e-11,4;UBERON:0000204,1.01e-11,4;UBERON:0010082,1.01e-11,4;UBERON:0000483,2.05e-11,306;UBERON:0000119,3.56e-11,309;UBERON:0003296,5.52e-11,4;UBERON:0010133,5.52e-11,4;UBERON:0002784,1.77e-10,4;UBERON:0002680,4.24e-10,9;UBERON:0001895,4.24e-10,9;UBERON:0010092,4.24e-10,9;UBERON:0005383,2.99e-09,3;UBERON:0005382,2.99e-09,3;UBERON:0001870,6.30e-09,3;UBERON:0000988,5.21e-08,3;UBERON:0001896,1.14e-07,3;UBERON:0005290,1.14e-07,3;UBERON:0010096,1.14e-07,3;UBERON:0000923,1.59e-07,560;UBERON:0010316,1.59e-07,560;UBERON:0005291,1.59e-07,560;UBERON:0006598,1.59e-07,560;UBERON:0010317,1.59e-07,560;UBERON:0002532,1.59e-07,560;UBERON:0002240,1.83e-07,3;UBERON:0005174,1.83e-07,3;UBERON:0001137,1.83e-07,3;UBERON:0002050,2.36e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73290365168481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,4.06551398755941,65.0699269288109,47.9439063922171,54.275269968329,48.4833451256404,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,31.8127247285215,25.0391561210713,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0,0,0,18.4173221758092,24.954618405538,23.9536557601433,0,0,0,0,0,0,8.96332770427808,0,3.64612489359914,37.2011382041812,50.4093113454205,44.2487035319541,85.0354508871117,31.9191428469831,15.1375924036241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,4.31367251076333,0,17.5698334294004,0,0,0,0,0,43.7684049131601,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,2.48578814858586,0,0,32.2251951415423,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,18.0126086612937,6.70836356570766,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,20.6759719350419,16.6168155456122,0,0.137539436597234,0,0,0,31.5897694621728,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,11.3769001598164,13.0910275725263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.8730680985144,39.0484047686282,28.293150339669,8.60113793535107,8.87432412294818,8.01043597943847,7.60917492149269,0,0,0,0,0,20.5787860627372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7065744758217,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,53.0761640910154,0,0.157265941855896,7.0986264824809,0,0,0,0,0,0,27.219405441706,0,0,39.5652026594191,36.8411098446521,19.9542323821439,30.152105543391,64.5303542327598,26.4872276937955,19.2156018301903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0825714319763,18.7458743667323,32.6565138471871,26.4443928508591,62.9021030370952,0,0,0,0,23.0351789427663,43.7168838884471,27.3134521906484,26.1811520053992,0,0,0,23.4495578770069,29.0057931412164,0,0,0,47.2917925647166,0,3.65263488203798,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,65.0569034777674,0.118920090777569,0,8.13559823916176,10.4164362061005,0,0.218559560503957,0,0,24.2746843514675,4.90771167787363,3.86160320425212,7.1851473689178,0.169927114687817,0,0,0,0,0,0,0,0,1.29005624836306,0,26.8566386254113,44.5077704147185,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0,0,0,0.227336094654718,0.535928260312357,14.0958804707992,9.82613460688005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CLVS1 | |||
}} |
Latest revision as of 17:14, 18 September 2015
Short description: | p1@CLVS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLVS1_5end |
Coexpression cluster: | C3355_cerebellum_Neural_occipital_small_parietal_Neurons_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000325897, ENST00000518592, ENST00000519846, ENST00000521189, ENST00000523868, NM_173519, uc003xug.2, uc003xuh.2, uc003xui.2, uc010lyp.2_5end |
EntrezGene: | CLVS1 |
HGNC: | 23139 |
UniProt: | Q8IUQ0G3V122E5RJ00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.64e-08 | 8 |