FFCP PHASE1:Hg19::chr14:105173283..105173317,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:105173283..105173317,+ to FFCP PHASE1:Hg19::chr14:105173283..105173317,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64423 | |EntrezGene=64423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23791 | |HGNC=23791 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-272bp_to_uc010awz.1_5end | |||
|cluster_id=chr14:105173283..105173317,+ | |||
|description=CAGE_peak_5_at_INF2_5end | |||
|id=chr14:105173283..105173317,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.78e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.72e-08;15!CL:0002681;1.42e-07;12!CL:0002584;1.42e-07;12!CL:1000507;2.09e-07;10!CL:1000494;2.09e-07;10!CL:1000497;4.01e-07;17!CL:0002518;4.01e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.90e-08,15;CL:1000507,1.09e-07,10;CL:1000494,1.09e-07,10;CL:0002681,2.42e-07,12;CL:0002584,2.42e-07,12;CL:1000497,4.35e-07,17;CL:0002518,4.35e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!9.71e-09!286;UBERON:0000064!9.21e-08!219;UBERON:0004111!2.08e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.72e-08;15!UBERON:0000353;1.72e-08;15!UBERON:0004819;1.72e-08;15!UBERON:0001285;1.72e-08;15!UBERON:0007684;1.72e-08;15!UBERON:0001225;1.42e-07;12!UBERON:0008987;1.42e-07;12!UBERON:0004211;2.09e-07;10!UBERON:0009773;2.09e-07;10!UBERON:0001231;2.09e-07;10!UBERON:0004810;2.09e-07;10!UBERON:0001851;8.26e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.40e-08,56;UBERON:0005068,1.40e-08,56;UBERON:0006241,1.40e-08,56;UBERON:0007135,1.40e-08,56;UBERON:0004211,1.90e-08,15;UBERON:0009773,1.90e-08,15;UBERON:0001231,1.90e-08,15;UBERON:0001285,1.90e-08,15;UBERON:0007684,1.90e-08,15;UBERON:0004208,1.90e-08,15;UBERON:0000353,2.93e-08,15;UBERON:0003075,5.74e-08,82;UBERON:0007284,5.74e-08,82;UBERON:0006555,1.01e-07,16;UBERON:0004819,1.01e-07,16;UBERON:0004810,1.09e-07,10;UBERON:0001893,1.10e-07,34;UBERON:0000073,1.62e-07,53;UBERON:0002616,1.62e-07,53;UBERON:0003056,1.78e-07,61;UBERON:0002780,1.79e-07,41;UBERON:0001890,1.79e-07,41;UBERON:0003080,1.79e-07,41;UBERON:0006240,1.79e-07,41;UBERON:0010371,2.22e-07,104;UBERON:0001225,2.42e-07,12;UBERON:0008987,2.42e-07,12;UBERON:0002346,3.56e-07,86 | |||
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|phase1_expression=0.363356758541113,0.642301571672949,0.563817616383885,2.00146596706261,0.893922188854576,0,0,0.631719873426831,0.522371256399677,0.491467873003018,2.09340350391728,0.436882744260345,1.84636884759917,0.37129905888014,0.994192127183747,1.34465029290355,0,0.730310090387373,0.975865597581014,0.369363174230364,0.816002764977012,0.626909442956176,0.286235987131057,0.410623275218653,0.251085279189606,0.534893840235659,0.410502947249729,0.314843125254717,0,0,0.154816123316076,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.616804496998528,1.00311897234407,0,0,1.94826728407911,0.222820913770347,0.294605907474837,0.221533894583621,0,0.25618263945135,0.260118695119756,1.47994114143309,0.829050053357545,0,0.296573126324121,0.535081656179426,0,1.35971211237079,0,0,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,1.88300474649071,0.795285947051099,0.486634870302636,0.283604451492204,1.10864698731282,0.702678285545008,0.654895377488563,0.364295288292542,0.370784442784429,0.649094787309367,0.696518949197069,0.531831842075461,0,0,0,0,0.860234595106124,0.694281003215189,0,1.25849830862972,1.6507082516404,0.417989933073621,1.03366703667732,0,1.00416183829401,1.20848795132744,0,2.68468263302986,0.735326160691737,1.62028389576352,0.446498641420399,0.22452937262617,0.788280363383256,0,0,0.549605231791222,0,0,0.872188104285069,0.496971951695318,0.506522046658319,0.794455084879313,0.573673241497627,0.354668382198357,0,1.06748995729705,1.72667283892012,0.933633106199299,0.269421344139376,0.653847612453835,0.151357427644931,0,0.468642863667593,0.936480230490962,1.1409436430889,0.747243402759005,0.352303495931295,0,0.421352420106746,1.02077085627447,0.859840221182376,1.54988671763648,1.18800285728205,0,1.82032272387605,2.15585442544872,0.168336113954066,0.875829639103749,0.831192346452549,0.438977620880838,0.612975591598039,0.600952235626387,0.567160915800105,1.25572744982203,0.640672166455702,0.211931901159562,0.900273288253207,0.92747276314595,2.06112432036503,0.558350568994769,0.843881661206331,0.487185025805993,1.51460264546469,0.368199594569197,0.323292113637624,1.42003837006646,0.403008392910561,0.67824236924195,0.193260853163297,1.09098448236334,0.286804595389004,0.487894824518382,0.397589304964456,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,2.78620756819187,1.44375896333917,1.0647612003586,2.19160097101532,1.92808823906786,1.43382164552112,1.74303555273925,1.42362371466658,0.808987848960987,1.56977172100277,0.769494313892781,2.21446636387394,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0.368965315629341,0.514703430895577,1.53650399572076,1.1240175325762,0.502644862058154,0.370353780634118,0.325808305310325,2.07986957055916,0,0.463721619900307,0.352226082707465,0.433099343283221,0.462985512576611,0.380508304469197,0.790204397959275,2.57545848628462,0.246217006087397,0.936017060556951,1.18904929830983,0,1.17587489739202,0.425325291727159,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0,0,0,0.761974731506028,2.29193055334967,0,0,1.02827492703324,1.20137223137567,0.285826432630578,1.56983518083505,0.87192013766656,1.1734125731352,0.517086863031111,3.57656445851882,0.845302752556,1.32969058292435,3.12022310734098,0.771622122786426,1.41849132023278,0.799266537048298,0.285955987316295,1.62786481617433,0.823240336780769,0.325736184293735,0,0.791951872933429,0.602878754119172,0.871533458600294,0.99972991182057,2.43247561282381,0.502257091432126,2.10833939483032,0.718874566474748,0,0,0.289562613335158,1.2328579353023,0.179060963239896,0,0.197030760201927,0,0.385029108839245,0,0,0.773288812777695,0,0,0,0,0,0.49076596687656,2.50085260529839,0.542530047399471,1.66376689224646,2.85486382075459,1.57702415033935,1.17141414992713,0.601892199455438,0,2.0694614258501,0.664225598535437,0.184369168541703,1.47702144595741,0.979005787313703,1.37257369524342,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0.907170879989041,0,0.460385919864187,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0.462629081407967,0.532685175939381,0.821271560138091,2.07701771673448,0.697262270759755,0.483437798366489,1.60405176242628,0.552485933615378,0.34444334449382,0.910455840033585,1.44236856455367,2.25599806453706,1.30926073077505,1.56869953835371,2.92278449306521,0.73886140225013,2.27466768141793,1.02056223165909,0.431831832204279,0,2.70946437543853,5.51858751240339,0.764628819135115,3.3243040357149,1.56712328305525,0.438519753291869,0.261435451024901,0.769350375349168,1.96808787419823,1.62689197332152,0.824328093181778,0.824125183365091,0.41254749960294,0,1.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| ||
|short_description=p5@INF2 | |||
}} | }} |
Latest revision as of 17:18, 18 September 2015
Short description: | p5@INF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_INF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -272bp_to_uc010awz.1_5end |
EntrezGene: | INF2 |
HGNC: | 23791 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.90e-08 | 15 |
kidney tubule cell | 1.09e-07 | 10 |
nephron tubule epithelial cell | 1.09e-07 | 10 |
kidney cortical cell | 2.42e-07 | 12 |
renal cortical epithelial cell | 2.42e-07 | 12 |
kidney cell | 4.35e-07 | 17 |
kidney epithelial cell | 4.35e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.40e-08 | 56 |
neural rod | 1.40e-08 | 56 |
future spinal cord | 1.40e-08 | 56 |
neural keel | 1.40e-08 | 56 |
nephron epithelium | 1.90e-08 | 15 |
renal tubule | 1.90e-08 | 15 |
nephron tubule | 1.90e-08 | 15 |
nephron | 1.90e-08 | 15 |
uriniferous tubule | 1.90e-08 | 15 |
nephrogenic mesenchyme | 1.90e-08 | 15 |
parenchyma | 2.93e-08 | 15 |
neural plate | 5.74e-08 | 82 |
presumptive neural plate | 5.74e-08 | 82 |
excretory tube | 1.01e-07 | 16 |
kidney epithelium | 1.01e-07 | 16 |
nephron tubule epithelium | 1.09e-07 | 10 |
telencephalon | 1.10e-07 | 34 |
regional part of nervous system | 1.62e-07 | 53 |
regional part of brain | 1.62e-07 | 53 |
pre-chordal neural plate | 1.78e-07 | 61 |
regional part of forebrain | 1.79e-07 | 41 |
forebrain | 1.79e-07 | 41 |
anterior neural tube | 1.79e-07 | 41 |
future forebrain | 1.79e-07 | 41 |
ecto-epithelium | 2.22e-07 | 104 |
cortex of kidney | 2.42e-07 | 12 |
renal parenchyma | 2.42e-07 | 12 |
neurectoderm | 3.56e-07 | 86 |