FFCP PHASE1:Hg19::chr1:173457358..173457369,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9588 | |EntrezGene=9588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16753 | |HGNC=16753 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-152bp_to_AJ844622_5end | |association_with_transcript=-152bp_to_AJ844622_5end | ||
|cluster_id=chr1:173457358..173457369,+ | |||
|description=CAGE_peak_9_at_PRDX6_5end | |description=CAGE_peak_9_at_PRDX6_5end | ||
|id=chr1:173457358..173457369,+ | |id=chr1:173457358..173457369,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;9.85e-16;3!UBERON:0005904;1.58e-11;4!UBERON:0002081;3.00e-11;2!UBERON:0010313;3.79e-08;10!UBERON:0006947;2.05e-07;3!UBERON:0004054;2.05e-07;3!UBERON:0007100;9.14e-07;25!UBERON:0002134;9.87e-07;1!UBERON:0005208;9.87e-07;1!UBERON:0004145;9.87e-07;1!UBERON:0005946;9.87e-07;1!UBERON:0005965;9.87e-07;1!UBERON:0002078;9.87e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.82e-16,3;UBERON:0005904,7.38e-12,4;UBERON:0002081,1.81e-11,2;UBERON:0010227,1.81e-11,2;UBERON:0007100,1.96e-08,27;UBERON:0010313,5.65e-08,10;UBERON:0002342,5.65e-08,10;UBERON:0005062,5.65e-08,10;UBERON:0004145,9.66e-08,3;UBERON:0006947,1.59e-07,3;UBERON:0004054,1.59e-07,3;UBERON:0000948,3.74e-07,24;UBERON:0005498,3.74e-07,24;UBERON:0004140,3.74e-07,24;UBERON:0009881,3.74e-07,24;UBERON:0004141,3.74e-07,24;UBERON:0003084,3.74e-07,24;UBERON:0007005,3.74e-07,24;UBERON:0004139,3.74e-07,24;UBERON:0004291,3.74e-07,24;UBERON:0002134,9.91e-07,1;UBERON:0005208,9.91e-07,1;UBERON:0005946,9.91e-07,1;UBERON:0005965,9.91e-07,1;UBERON:0002078,9.91e-07,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.994192127183747,0,0.602694528023977,0,0.487932798790507,0.492484232307152,0.204000691244253,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0.464858073811369,0.411167888021826,0,0,0.768482119587302,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0.221533894583621,0,0.384273959177026,0,0.164437904603676,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0,4.87613732627923,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0,0,0,0,0.741800787835671,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0.772921620136887,0.930584281657949,0,0.0974370051611986,0,0.276149695926898,0.323292113637624,0.710019185033229,1.0075209822764,0,0,0.272746120590835,0,0.243947412259191,0,0.348581828608555,0.207322110030741,0,1.09493207722749,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.992645754591546,0.435758888184812,0.71181185733329,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0,0,0,0.264145302039678,0,0.864719720501769,0.6312121671319,0,0,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0,0.224170287987055,0.394061520403854,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0.542530047399471,0.415941723061614,0.892144943985809,0.473107245101804,0.585707074963566,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0.992431231275107,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0.177561725313127,0,0,0,0,0.200506470303285,0.184161977871793,0.229628896329213,0.546273504020151,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0.219259876645935,0,0.256450125116389,0,0,0.618246069886334,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0,0.462145851343933,0.460511024178389,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.534192213880424,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.429374660225974,0.744316738719335,0,0.571890581771475,0.255897791311334,1.28381696410176,0,0,0.359744915166629,0,0.353437207037059,0,3.17020642346017,0,0,0,1.05650146756755,0.9554993798559,0.565621727814851,1.13008116620243,0,0,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0.7133421029625,0,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0.288666338176536,0,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0.427296284509893,0.962479855263359,0.245040215981032,0.185803175125719,0.144269212976445,0.0711418433484141,0.318852545457645,0,0.191505370132367,0.423347165447766,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0.111443384277478,0,0,0.890894042497916,0.307160702099232,0.994147647766298,0,0,0.824019371133798,0,0.796991953004279,0,0.251932747854276,0.102268682502155,0.246169610922139,0.933118762985422,0.179736702294654,0,0,0.197286811273867,2.3948309234694,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,0.724999575434793,0.341380344856499,0.762760950878299,0.472775363535873,1.03423011972439,0.291604613383254,0.173624994933292,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0.227884111694002,0.23056390438806,0.0897576444097721,0.108647371922008,0,0.0915975934018623,1.06606955203727,1.02193298195737,0.31396051279005,0.166211681900156,0.451191321234361,0.19606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| ||
|short_description=p9@PRDX6 | |short_description=p9@PRDX6 | ||
}} | }} |
Latest revision as of 17:46, 18 September 2015
Short description: | p9@PRDX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRDX6_5end |
Coexpression cluster: | NA |
Association with transcript: | -152bp_to_AJ844622_5end |
EntrezGene: | PRDX6 |
HGNC: | 16753 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.82e-16 | 3 |
duct of male reproductive system | 7.38e-12 | 4 |
cardiac atrium | 1.81e-11 | 2 |
future cardiac atrium | 1.81e-11 | 2 |
primary circulatory organ | 1.96e-08 | 27 |
neural crest-derived structure | 5.65e-08 | 10 |
neural crest | 5.65e-08 | 10 |
neural fold | 5.65e-08 | 10 |
outflow tract | 9.66e-08 | 3 |
male genital duct | 1.59e-07 | 3 |
internal male genitalia | 1.59e-07 | 3 |
heart | 3.74e-07 | 24 |
primitive heart tube | 3.74e-07 | 24 |
primary heart field | 3.74e-07 | 24 |
anterior lateral plate mesoderm | 3.74e-07 | 24 |
heart tube | 3.74e-07 | 24 |
heart primordium | 3.74e-07 | 24 |
cardiac mesoderm | 3.74e-07 | 24 |
cardiogenic plate | 3.74e-07 | 24 |
heart rudiment | 3.74e-07 | 24 |
tricuspid valve | 9.91e-07 | 1 |
right atrium valve | 9.91e-07 | 1 |
outflow tract of atrium | 9.91e-07 | 1 |
outflow part of right atrium | 9.91e-07 | 1 |
right cardiac atrium | 9.91e-07 | 1 |