FFCP PHASE1:Hg19::chr3:5022254..5022271,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:5022254..5022271,+ to FFCP PHASE1:Hg19::chr3:5022254..5022271,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8553 | |EntrezGene=8553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1046 | |HGNC=1046 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-241bp_to_AK309173_5end | |||
|cluster_id=chr3:5022254..5022271,+ | |||
|coexpression_cluster_id=C4335 | |||
|description=CAGE_peak_12_at_BHLHE40_5end | |||
|id=chr3:5022254..5022271,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.74e-20!45;CL:0002057!2.77e-20!42;CL:0000766!3.76e-20!76;CL:0000557!2.46e-19!71;CL:0000839!3.31e-18!70;CL:0000738!6.90e-18!140;CL:0002009!3.64e-16!65;CL:0000763!5.17e-15!112;CL:0000049!5.17e-15!112;CL:0002194!9.97e-15!63;CL:0000576!9.97e-15!63;CL:0000040!9.97e-15!63;CL:0000559!9.97e-15!63;CL:0002031!8.52e-14!124;CL:0000037!1.33e-13!172;CL:0000566!1.33e-13!172;CL:0000988!1.51e-13!182;CL:0002032!6.08e-12!165;CL:0000837!6.08e-12!165;CL:0002087!3.31e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.70e-31;33!CL:0002057;5.70e-31;33!CL:0000097;3.63e-23;5!CL:0000766;2.38e-21;69!CL:0000473;1.14e-20;39!CL:0000234;1.14e-20;39!CL:0000576;3.50e-19;48!CL:0000623;1.89e-14;3!CL:0000767;6.96e-14;3!CL:0000163;9.76e-13;9!CL:0002087;2.48e-11;104!CL:0001014;2.36e-10;2!CL:0001016;2.36e-10;2!CL:0000081;7.23e-10;11!CL:0000763;9.51e-10;100!CL:0000738;1.54e-09;136!CL:0000094;4.75e-09;8!CL:0002393;1.88e-07;6!CL:0002397;1.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.28e-43,72;CL:0000738,1.03e-42,136;CL:0000557,1.25e-40,67;CL:0000860,3.87e-36,42;CL:0002057,3.87e-36,42;CL:0000839,1.03e-34,66;CL:0000037,5.04e-33,168;CL:0000988,7.65e-33,177;CL:0002031,6.70e-32,120;CL:0000763,1.40e-31,108;CL:0000049,1.40e-31,108;CL:0000473,5.14e-31,48;CL:0000234,5.14e-31,48;CL:0002032,5.02e-29,161;CL:0000837,5.02e-29,161;CL:0002009,1.66e-28,61;CL:0002194,7.56e-24,59;CL:0000576,7.56e-24,59;CL:0000040,7.56e-24,59;CL:0000559,7.56e-24,59;CL:0000097,3.65e-23,5;CL:0002028,3.65e-23,5;CL:0002087,2.03e-22,115;CL:0000623,2.12e-14,3;CL:0000825,2.12e-14,3;CL:0000767,6.12e-14,3;CL:0000163,9.79e-13,9;CL:0000134,3.92e-12,354;CL:0002320,9.93e-12,361;CL:0001014,2.11e-10,2;CL:0001016,2.11e-10,2;CL:0000219,2.62e-10,386;CL:0000081,6.98e-10,11;CL:0000094,4.42e-09,8;CL:0000034,9.61e-09,441;CL:0000048,1.43e-08,427;CL:0000723,2.49e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-26;42!CL:0000049;2.00e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.54e-17!80;UBERON:0001474!4.14e-15!86;UBERON:0002390!5.97e-14!102;UBERON:0003061!5.97e-14!102;UBERON:0002405!2.04e-12!115;UBERON:0002193!6.40e-12!112;UBERON:0004765!8.20e-12!101;UBERON:0001434!8.20e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.05e-35,76;UBERON:0002390,8.89e-33,98;UBERON:0003061,8.89e-33,98;UBERON:0001474,4.14e-32,82;UBERON:0002193,4.03e-29,108;UBERON:0004765,1.03e-28,90;UBERON:0002405,1.36e-27,93;UBERON:0001434,3.13e-25,100;UBERON:0003081,2.08e-13,203;UBERON:0002204,1.25e-12,167;UBERON:0002384,3.53e-11,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,6.29382842958246,1.53531759238885,2.78669021968937,0.919421224478927,0,0,0,0,0,6.64794490238253,3.00816671205213,4.77423915574874,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.929716147622738,0.411167888021826,2.16794459626573,0.863077176966451,1.5369642391746,1.18241114944293,2.41321976515633,2.5819387343353,1.35426486594342,0.941211697713023,1.09162460023138,0.898893937780338,3.06083892370903,5.77672248736969,2.55734850319616,0.659702600373432,1.39624560335142,0.426224750532694,2.32167390902867,1.70215567407342,0.622822248995575,0.502497330513487,1.0429658368404,0.868755378820466,1.81619850790011,1.84138817993782,2.53169909952708,0.845021145247767,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,1.68152568894461,0,0.196709770113833,0,0.822405995998037,0,0,0,0,0.668462741311041,0.589211814949674,0,0,0,0.390178042679635,0.328875809207352,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,0.724122019413995,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.443458794925128,0.43917392846563,0.0654895377488563,0,0,0,0.174129737299267,0,0.953962497221368,1.14398982156026,0.371457501329565,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,3.87780264148325,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0.503946384596579,0.141775097242386,0,0,0,3.94130590316755,5.19485760678034,9.12243708379397,4.17947864909188,5.80715193761348,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,4.53170748464433,4.31255149719035,4.10697716095195,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,1.6541442089831,0.862856803274467,1.70764092485511,0.303127571446259,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0,0.802025881213139,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0.650756789328606,0.309123034943167,0,0.247528499761764,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.178064071293475,0.330569830721956,0.576570202095319,0.765676274967505,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,1.22587722705226,0.568272293612826,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0,0.16480387422676,0,0.996239941255349,0.552567831062295,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0.349839999984783,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0.158936578980379,0.632994193584081,0.163232808159148,0,0,0,0.0884575645033392,1.22206028986725,2.37216902944498,0,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0.568679216656392,0.300646838828985,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.581934098930517,0,0.225980740780532,0,0.19871461170299,0.253243183823515,0,0.160317640503067,0,0,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0.407712618220842,0.313808538937,0.101998217636322,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0.196854963029498,0,0,0,0,0,0,4.72445172258151,6.96421759102155,0.0607495566580247,0,0.157611414598396,0.157363764404994,0,0.35857467866569,0,0.714695326373367,0,0.76280561296425,0,0,0,0,0.328370082997356,0,0,0,0,0.387848869084652,0.52893040697076,0.342173675768659,0,0.106787412567695,0.628817220398664,0,0,0,0,1.27668251554036,0,0.2506898940227,0,0,0.157054096250234,0,0,0.250381861413,0,0.110929051536852,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0.757612021100357,0.50313580350515,0,0.457680136793847,0,0.15543720058278,0.147855149989634,0,0,0.621051827505038,0,0.265841714557995,0.521745061811734,0.601030435988874,0,0.813741466409323,0.54554597760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| ||
|short_description=p12@BHLHE40 | |||
}} | }} |
Latest revision as of 18:33, 18 September 2015
Short description: | p12@BHLHE40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BHLHE40_5end |
Coexpression cluster: | C4335_Mast_Basophils_immature_CD14_Eosinophils_serous_CD8 |
Association with transcript: | -241bp_to_AK309173_5end |
EntrezGene: | BHLHE40 |
HGNC: | 1046 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.05e-35 | 76 |
hematopoietic system | 8.89e-33 | 98 |
blood island | 8.89e-33 | 98 |
bone element | 4.14e-32 | 82 |
hemolymphoid system | 4.03e-29 | 108 |
skeletal element | 1.03e-28 | 90 |
immune system | 1.36e-27 | 93 |
skeletal system | 3.13e-25 | 100 |
lateral plate mesoderm | 2.08e-13 | 203 |
musculoskeletal system | 1.25e-12 | 167 |
connective tissue | 3.53e-11 | 371 |