FFCP PHASE1:Hg19::chr17:1549011..1549032,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8578 | |EntrezGene=8578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16820 | |HGNC=16820 | ||
|TSSclassifier=strong | |||
|UniProt=Q14162 | |UniProt=Q14162 | ||
|association_with_transcript=8bp_to_ENST00000348987,ENST00000434376,NM_003693,NM_145350,NM_145352,NR_028075,NR_028076,uc002fsy.1,uc002fsz.1,uc002fta.1,uc010cjv.1_5end | |association_with_transcript=8bp_to_ENST00000348987,ENST00000434376,NM_003693,NM_145350,NM_145352,NR_028075,NR_028076,uc002fsy.1,uc002fsz.1,uc002fta.1,uc010cjv.1_5end | ||
|cluster_id=chr17:1549011..1549032,- | |||
|coexpression_cluster_id=C1611 | |||
|description=CAGE_peak_1_at_SCARF1_5end | |description=CAGE_peak_1_at_SCARF1_5end | ||
|id=chr17:1549011..1549032,- | |id=chr17:1549011..1549032,- | ||
|ontology_enrichment_celltype=CL:0000766!1.36e-27!76;CL:0000763!7.42e-27!112;CL:0000049!7.42e-27!112;CL:0000557!3.05e-25!71;CL:0002057!6.78e-24!42;CL:0000839!1.39e-22!70;CL:0002009!2.71e-22!65;CL:0000115!1.33e-21!35;CL:0000860!5.29e-21!45;CL:0002194!5.88e-21!63;CL:0000576!5.88e-21!63;CL:0000040!5.88e-21!63;CL:0000559!5.88e-21!63;CL:0002139!1.88e-19!24;CL:0002078!9.98e-16!44;CL:0000071!3.94e-15!18;CL:0002546!3.94e-15!18;CL:0000037!6.46e-14!172;CL:0000566!6.46e-14!172;CL:0000988!1.50e-13!182;CL:0002032!7.65e-13!165;CL:0000837!7.65e-13!165;CL:0000738!2.11e-11!140;CL:0002031!6.15e-09!124;CL:1000413!1.36e-08!9;CL:0000213!1.69e-08!57;CL:0000215!1.69e-08!57;CL:0002087!2.40e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.36e-27!76;CL:0000763!7.42e-27!112;CL:0000049!7.42e-27!112;CL:0000557!3.05e-25!71;CL:0002057!6.78e-24!42;CL:0000839!1.39e-22!70;CL:0002009!2.71e-22!65;CL:0000115!1.33e-21!35;CL:0000860!5.29e-21!45;CL:0002194!5.88e-21!63;CL:0000576!5.88e-21!63;CL:0000040!5.88e-21!63;CL:0000559!5.88e-21!63;CL:0002139!1.88e-19!24;CL:0002078!9.98e-16!44;CL:0000071!3.94e-15!18;CL:0002546!3.94e-15!18;CL:0000037!6.46e-14!172;CL:0000566!6.46e-14!172;CL:0000988!1.50e-13!182;CL:0002032!7.65e-13!165;CL:0000837!7.65e-13!165;CL:0000738!2.11e-11!140;CL:0002031!6.15e-09!124;CL:1000413!1.36e-08!9;CL:0000213!1.69e-08!57;CL:0000215!1.69e-08!57;CL:0002087!2.40e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-24;33!CL:0002057;1.07e-24;33!CL:0002139;3.09e-22;24!CL:0000115;4.35e-22;36!CL:0000473;7.80e-22;39!CL:0000234;7.80e-22;39!CL:0000071;3.04e-17;18!CL:0000576;1.27e-15;48!CL:0000766;1.66e-13;69!CL:0002078;2.40e-12;45!CL:0000763;2.47e-11;100!CL:1000413;1.08e-09;9!CL:0000213;3.29e-07;58!CL:0000215;3.29e-07;58!CL:0002544;6.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.84e-32,72;CL:0000763,8.91e-32,108;CL:0000049,8.91e-32,108;CL:0000557,2.60e-29,67;CL:0000473,4.10e-26,48;CL:0000234,4.10e-26,48;CL:0000115,5.34e-26,36;CL:0002009,7.07e-26,61;CL:0000839,1.59e-25,66;CL:0000860,7.51e-25,42;CL:0002057,7.51e-25,42;CL:0002194,2.64e-24,59;CL:0000576,2.64e-24,59;CL:0000040,2.64e-24,59;CL:0000559,2.64e-24,59;CL:0002139,3.04e-22,24;CL:0002078,6.10e-19,45;CL:0000071,3.03e-17,18;CL:0002546,3.03e-17,18;CL:0000037,1.50e-13,168;CL:0002032,4.85e-13,161;CL:0000837,4.85e-13,161;CL:0000988,1.42e-11,177;CL:0000213,8.18e-11,58;CL:0000215,8.18e-11,58;CL:0000738,2.07e-10,136;CL:1000413,1.09e-09,9;CL:0002031,6.01e-08,120;CL:0002544,6.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-18;42!CL:0002546;3.04e-17;18!CL:0000049;5.83e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-33!115;UBERON:0002193!2.43e-28!112;UBERON:0003081!2.75e-24!216;UBERON:0002390!3.96e-24!102;UBERON:0003061!3.96e-24!102;UBERON:0002405!4.87e-23!115;UBERON:0002371!1.30e-20!80;UBERON:0001474!1.99e-17!86;UBERON:0001986!3.94e-15!18;UBERON:0004638!3.94e-15!18;UBERON:0004852!3.94e-15!18;UBERON:0004765!5.09e-12!101;UBERON:0001434!5.09e-12!101;UBERON:0000487!1.47e-11!22;UBERON:0006914!3.90e-09!25;UBERON:0000025!4.02e-09!194;UBERON:0004111!1.26e-08!241;UBERON:0003915!1.36e-08!9;UBERON:0004700!1.36e-08!9;UBERON:0001917!1.36e-08!9;UBERON:0001049!6.62e-08!57;UBERON:0005068!6.62e-08!57;UBERON:0006241!6.62e-08!57;UBERON:0007135!6.62e-08!57;UBERON:0003080!6.16e-07!42;UBERON:0000467!8.43e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.04e-17;18!UBERON:0001986;3.04e-17;18!UBERON:0004852;3.04e-17;18!UBERON:0000487;1.17e-12;22!UBERON:0006914;3.06e-10;25!UBERON:0003915;1.08e-09;9!UBERON:0004700;1.08e-09;9!UBERON:0001917;1.08e-09;9!UBERON:0007023;2.62e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.69e-35,114;UBERON:0002193,2.91e-33,108;UBERON:0002390,5.55e-29,98;UBERON:0003061,5.55e-29,98;UBERON:0002405,1.14e-28,93;UBERON:0003081,3.29e-26,203;UBERON:0002371,1.86e-24,76;UBERON:0001474,4.60e-21,82;UBERON:0004765,2.54e-17,90;UBERON:0004638,3.03e-17,18;UBERON:0001986,3.03e-17,18;UBERON:0004852,3.03e-17,18;UBERON:0001434,3.11e-14,100;UBERON:0000487,1.17e-12,22;UBERON:0000926,6.06e-11,315;UBERON:0004120,6.06e-11,315;UBERON:0006603,6.06e-11,315;UBERON:0006914,3.05e-10,25;UBERON:0003915,1.09e-09,9;UBERON:0004700,1.09e-09,9;UBERON:0001917,1.09e-09,9;UBERON:0004111,2.12e-07,240;UBERON:0000025,2.12e-07,192;UBERON:0005423,3.11e-07,581;UBERON:0000922,4.68e-07,592;UBERON:0001009,6.95e-07,112;UBERON:0001049,9.66e-07,56;UBERON:0005068,9.66e-07,56;UBERON:0006241,9.66e-07,56;UBERON:0007135,9.66e-07,56;UBERON:0000923,9.93e-07,560;UBERON:0010316,9.93e-07,560;UBERON:0005291,9.93e-07,560;UBERON:0006598,9.93e-07,560;UBERON:0010317,9.93e-07,560;UBERON:0002532,9.93e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,2.36018566109342,1.53531759238885,2.78669021968937,0,0,0,0,0,15.2672228454121,8.30993112797816,12.0326668482085,15.4077718208255,2.46307021663917,5.18229865630367,2.57575567634187,13.6674344452791,10.2026504795979,12.1292030593908,29.5184876870219,19.3248907370258,29.4221052350348,80.5538698502021,66.6017836975662,63.6137198400294,28.958637181876,28.4013260776883,35.2108865145289,19.9536879915161,8.73299680185107,16.8542613333813,27.2414664210103,21.8231738411744,32.6061934157511,63.6613009360362,54.0546512154622,64.7861620809695,48.4649428509735,76.5970053333039,80.9668923694247,57.2846956785375,52.1482918420201,59.0753657597917,44.1941636922359,44.5615939544953,57.2796921268001,1.05627643155971,0.425208599930087,3.14487968262564,3.48218756554135,6.30742949934327,2.73233497385036,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,13.2171328579026,11.7706798226123,6.05783394982677,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.657751618414705,0.552700035571697,0.289803085735052,0,0,0,0,0,0,0,0.637130828648193,0,0,0,0.255973222308837,1.24930726552346,0.710331756132051,0,0,0,0,0,0.670700859703636,1.2786256184353,0,0,0,0,0,0,0,0.087834785693126,5.17367348215965,0,0,19.1482962256263,18.6318818910216,16.8856609858959,0.476981248610684,0.571994910780128,0.371457501329565,33.1933220302397,37.8503221846695,42.3511411961265,63.8797974374131,75.929397953993,75.6574615335186,43.8889429727302,39.7961809120767,27.7497684895634,23.7651635062916,59.2159096150446,35.7327889687701,51.2530320851156,54.7817989715344,72.9127753093584,32.0586024539846,38.6190520917012,31.3059915743636,33.7296602424943,39.8691577018614,50.1972778369316,47.4409502769828,120.211881885981,0,0,0,0,0,0,0,1.06748995729705,0,0.311211035399766,1.61652806483626,0.653847612453835,0,0,0,0,9.12754914471119,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,90.7931209188317,35.0604434508615,0.8231480226628,0,1.26755034821831,1.96565443335525,8.86184860022106,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,40.5669718208617,56.0212470217699,44.8999799273652,0,0,7.38651018262192,6.31811515875942,8.02608276359133,0,0,0,0,0,0.383382679165211,1.47798971368783,10.91800581764,6.84182781284548,15.2767150621979,13.0029706429171,0,0,0,1.71072446022705,0,0,0,0.224262168690721,0.87192013766656,0.22001485746285,0,0,5.917119267892,0,0,0,0,0,0.142977993658148,0,0,1.62868092146868,0,0,0,0,0,3.64871341923571,2.51128545716063,0,0,0,0,0,0,0,0,1.18218456121156,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,33.7053160776232,59.832291840805,41.4415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,1.6541442089831,4.31428401637234,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,5.41439535488894,1.69433741629712,7.84349769176855,8.76835347919564,0.844413031143006,105.772047185934,84.8767589329813,22.6711711907246,117.21271204462,0.812839312631559,0.501689773854853,0,0.831076008928724,4.70136984916574,0,0.261435451024901,0,0,0,5.77029665227245,0,0,0,0,0,0.290012154876366,0,0,0,0.214840489736547,0,0.340906509664404,0.356128142586949,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,7.06078505825844,0,0,0,0,11.6712950123399,12.234195314278,11.3929437434833,5.47933083552915,6.17043409629291,12.3209929126616,9.72056587028607,12.6900028207083,0,0,0,0,0.721346064882224,0,0.159426272728822,7.98317485731266,24.3211820068106,33.8677732358213,6.81706074576566,9.5471040558576,0,0,52.6332401889141,41.9843608947976,0,0,0,3.09154810280188,0,0.223676107892416,0,0,0,0,11.6295941744673,28.3111172798147,28.1974010175699,0,15.236850644277,0,0,0,0,0,0,1.9882952955326,2.53204949538923,0,0,0,5.57894367102995,6.07824614168525,0,0,0.123084805461069,0,0,0,0,4.63624006493588,7.18449277040819,0,2.90799823828566,1.85536196323703,0,0,0,15.9499906595655,0,0,0,0,0,0,4.42870692906919,2.41192877250816,0,1.99042667876204,0.295547618953547,3.07139556015562,0,0,6.61772223132655,0,0,0,0,2.55200927785536,0.0915975934018623,1.06606955203727,0,9.57579564009651,7.31331400360688,0,0,0,0,10.3308776337246,0,0,0,0,1.99052386215701,3.80367527364358,4.27721101453538,0,0,0,2.3590396543237,15.248975298677,1.40558667435203,0,0,0,2.76209081994573,14.5188859258397,0.91821828489147,9.35161378501622,0,0,0,0.992975867626496,0,1.19472429772959,0,0,0,0,0,5.59125338374496,0,0,0,0,3.20063754411784,0,5.19755703795225,0,0,1.89932387867636,0,0,4.90941887900511,0,0,0,0,0,4.34883874479014,0,0,0.104602846312333,0,0,1.20084057741958,2.87501295673185,24.2718517327247,0,0,6.14421282798959,6.87481272035051,35.8936512288407,4.99197501247478,5.57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| ||
|short_description=p1@SCARF1 | |short_description=p1@SCARF1 | ||
}} | }} |
Latest revision as of 18:34, 18 September 2015
Short description: | p1@SCARF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARF1_5end |
Coexpression cluster: | C1611_Renal_Hepatic_Eosinophils_Endothelial_CD14_heart_Neutrophils |
Association with transcript: | 8bp_to_ENST00000348987, ENST00000434376, NM_003693, NM_145350, NM_145352, NR_028075, NR_028076, uc002fsy.1, uc002fsz.1, uc002fta.1, uc010cjv.1_5end |
EntrezGene: | SCARF1 |
HGNC: | 16820 |
UniProt: | Q14162 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data