FFCP PHASE1:Hg19::chr3:50396911..50396972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11070 | |EntrezGene=11070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30055 | |HGNC=30055 | ||
|TSSclassifier=strong | |||
|UniProt=Q12893 | |UniProt=Q12893 | ||
|association_with_transcript=0bp_to_NM_007024,uc003dan.1_5end | |association_with_transcript=0bp_to_NM_007024,uc003dan.1_5end | ||
|cluster_id=chr3:50396911..50396972,- | |||
|coexpression_cluster_id=C1811 | |||
|description=CAGE_peak_1_at_TMEM115_5end | |description=CAGE_peak_1_at_TMEM115_5end | ||
|id=chr3:50396911..50396972,- | |id=chr3:50396911..50396972,- | ||
|ontology_enrichment_celltype=CL:0000055!2.31e-24!180;CL:0000222!4.43e-21!119;CL:0002371!1.72e-18!591;CL:0000220!1.32e-17!246;CL:0000183!1.63e-17!59;CL:0002321!2.96e-17!248;CL:0000144!2.09e-16!625;CL:0000680!1.06e-15!57;CL:0000056!1.06e-15!57;CL:0000355!1.06e-15!57;CL:0000187!4.52e-15!54;CL:0000192!5.91e-15!42;CL:0000514!5.91e-15!42;CL:0000393!1.16e-12!60;CL:0000211!1.16e-12!60;CL:0000359!2.67e-12!32;CL:0000057!3.24e-11!75;CL:0000548!4.26e-09!679;CL:0000004!4.26e-09!679;CL:0000255!4.26e-09!679;CL:0000012!1.92e-08!682;CL:0000115!2.08e-08!35;CL:0002078!1.07e-07!44;CL:0000213!8.77e-07!57;CL:0000215!8.77e-07!57 | |ontology_enrichment_celltype=CL:0000055!2.31e-24!180;CL:0000222!4.43e-21!119;CL:0002371!1.72e-18!591;CL:0000220!1.32e-17!246;CL:0000183!1.63e-17!59;CL:0002321!2.96e-17!248;CL:0000144!2.09e-16!625;CL:0000680!1.06e-15!57;CL:0000056!1.06e-15!57;CL:0000355!1.06e-15!57;CL:0000187!4.52e-15!54;CL:0000192!5.91e-15!42;CL:0000514!5.91e-15!42;CL:0000393!1.16e-12!60;CL:0000211!1.16e-12!60;CL:0000359!2.67e-12!32;CL:0000057!3.24e-11!75;CL:0000548!4.26e-09!679;CL:0000004!4.26e-09!679;CL:0000255!4.26e-09!679;CL:0000012!1.92e-08!682;CL:0000115!2.08e-08!35;CL:0002078!1.07e-07!44;CL:0000213!8.77e-07!57;CL:0000215!8.77e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.28e-11;32!CL:0000192;3.34e-11;43!CL:0000134;2.09e-08;55!CL:0000187;3.84e-08;55!CL:0000393;1.53e-07;61!CL:0000211;1.53e-07;61!CL:0000115;1.79e-07;36!CL:0000349;3.57e-07;19!CL:0000048;6.83e-07;58!CL:0000723;7.39e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.00e-21,121;CL:0002321,8.31e-18,250;CL:0000680,3.91e-16,58;CL:0000056,3.91e-16,58;CL:0000355,3.91e-16,58;CL:0000187,1.66e-15,55;CL:0000192,2.12e-15,43;CL:0000514,2.12e-15,43;CL:0000393,4.56e-13,61;CL:0000211,4.56e-13,61;CL:0000359,2.67e-12,32;CL:0000057,4.16e-11,76;CL:0000115,1.34e-08,36;CL:0002078,6.90e-08,45;CL:0000349,3.98e-07,19;CL:0000213,5.81e-07,58;CL:0000215,5.81e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;3.34e-11;43!CL:0000355;8.45e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.16e-19!84;UBERON:0002049!4.47e-18!79;UBERON:0007798!4.47e-18!79;UBERON:0003914!1.09e-17!118;UBERON:0000055!4.53e-15!69;UBERON:0000486!5.07e-15!82;UBERON:0004290!5.80e-15!70;UBERON:0005256!6.16e-15!143;UBERON:0004535!7.40e-15!110;UBERON:0001009!1.39e-14!113;UBERON:0001637!2.01e-14!42;UBERON:0003509!2.01e-14!42;UBERON:0004572!2.01e-14!42;UBERON:0000490!3.95e-14!138;UBERON:0001981!4.50e-14!60;UBERON:0007500!4.50e-14!60;UBERON:0004537!4.50e-14!60;UBERON:0006965!4.50e-14!60;UBERON:0000468!4.63e-14!659;UBERON:0000914!7.18e-14!83;UBERON:0002329!7.18e-14!83;UBERON:0003077!7.18e-14!83;UBERON:0003059!7.18e-14!83;UBERON:0007282!7.18e-14!83;UBERON:0009618!7.18e-14!83;UBERON:0007285!7.18e-14!83;UBERON:0001134!9.04e-14!61;UBERON:0002036!9.04e-14!61;UBERON:0003082!9.04e-14!61;UBERON:0002385!2.14e-13!63;UBERON:0001015!2.14e-13!63;UBERON:0000383!2.14e-13!63;UBERON:0000119!2.54e-11!312;UBERON:0000467!3.20e-11!625;UBERON:0000480!5.50e-11!626;UBERON:0000483!6.08e-11!309;UBERON:0004573!6.19e-11!33;UBERON:0004571!6.19e-11!33;UBERON:0002100!7.10e-11!216;UBERON:0000475!1.43e-10!365;UBERON:0000926!6.85e-09!448;UBERON:0004120!6.85e-09!448;UBERON:0006603!6.85e-09!448;UBERON:0000477!2.47e-08!286;UBERON:0003081!1.11e-07!216;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0002050!1.32e-07!605;UBERON:0005423!1.32e-07!605;UBERON:0000481!2.33e-07!347;UBERON:0000922!2.58e-07!612;UBERON:0004111!3.11e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.45e-10;42!UBERON:0003509;1.45e-10;42!UBERON:0004572;1.45e-10;42!UBERON:0004573;4.19e-10;33!UBERON:0004571;4.19e-10;33!UBERON:0007500;3.97e-09;56!UBERON:0001981;3.97e-09;56!UBERON:0004537;3.97e-09;56!UBERON:0000055;1.61e-08;65!UBERON:0003914;4.25e-08;74!UBERON:0002049;5.59e-08;75!UBERON:0007798;5.59e-08;75 | |||
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| ||
|short_description=p1@TMEM115 | |short_description=p1@TMEM115 | ||
}} | }} |
Latest revision as of 20:12, 18 September 2015
Short description: | p1@TMEM115 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM115_5end |
Coexpression cluster: | C1811_Mesenchymal_Alveolar_Pericytes_Placental_Renal_Melanocyte_Fibroblast |
Association with transcript: | 0bp_to_NM_007024, uc003dan.1_5end |
EntrezGene: | TMEM115 |
HGNC: | 30055 |
UniProt: | Q12893 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.00e-21 | 121 |
embryonic cell | 8.31e-18 | 250 |
muscle precursor cell | 3.91e-16 | 58 |
myoblast | 3.91e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.91e-16 | 58 |
muscle cell | 1.66e-15 | 55 |
smooth muscle cell | 2.12e-15 | 43 |
smooth muscle myoblast | 2.12e-15 | 43 |
electrically responsive cell | 4.56e-13 | 61 |
electrically active cell | 4.56e-13 | 61 |
vascular associated smooth muscle cell | 2.67e-12 | 32 |
fibroblast | 4.16e-11 | 76 |
endothelial cell | 1.34e-08 | 36 |
meso-epithelial cell | 6.90e-08 | 45 |
extraembryonic cell | 3.98e-07 | 19 |
lining cell | 5.81e-07 | 58 |
barrier cell | 5.81e-07 | 58 |