FFCP PHASE1:Hg19::chr14:106329430..106329463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=P01854,P01880 | |UniProt=P01854,P01880 | ||
|association_with_transcript=0bp_to_uc001yrw.1,uc001ysj.2,uc001ysk.1,uc001ysl.1_5end | |association_with_transcript=0bp_to_uc001yrw.1,uc001ysj.2,uc001ysk.1,uc001ysl.1_5end | ||
|cluster_id=chr14:106329430..106329463,- | |||
|coexpression_cluster_id=C359 | |coexpression_cluster_id=C359 | ||
|description=CAGE_peak_1_at_uc001yrw.1_5end,CAGE_peak_1_at_uc001ysj.2_5end,CAGE_peak_1_at_uc001ysk.1_5end,CAGE_peak_1_at_uc001ysl.1_5end | |description=CAGE_peak_1_at_uc001yrw.1_5end,CAGE_peak_1_at_uc001ysj.2_5end,CAGE_peak_1_at_uc001ysk.1_5end,CAGE_peak_1_at_uc001ysl.1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!2.98e-49!24;CL:0000826!2.98e-49!24;CL:0000236!1.90e-31!14;CL:0000542!1.33e-20!53;CL:0000051!1.33e-20!53;CL:0000838!3.25e-19!52;CL:0002087!6.58e-08!119 | |ontology_enrichment_celltype=CL:0000945!2.98e-49!24;CL:0000826!2.98e-49!24;CL:0000236!1.90e-31!14;CL:0000542!1.33e-20!53;CL:0000051!1.33e-20!53;CL:0000838!3.25e-19!52;CL:0002087!6.58e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.41e-65;24!CL:0000236;3.73e-50;13!CL:0000542;1.40e-18;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.41e-65;24!CL:0000236;3.73e-50;13!CL:0000542;1.40e-18;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.30e-65,24;CL:0000826,1.30e-65,24;CL:0000236,7.33e-55,14;CL:0000838,7.57e-28,52;CL:0000542,3.09e-27,53;CL:0000051,3.09e-27,53;CL:0002087,4.56e-10,115;CL:0002031,1.77e-09,120;CL:0000738,6.88e-08,136;CL:0000817,5.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.40e-18;53!UBERON:0006965;4.13e-10;2 | |ontology_enrichment_development_v019=CL:0000051;1.40e-18;53!UBERON:0006965;4.13e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.68e-31!115;UBERON:0000178!1.62e-09!15;UBERON:0000179!1.62e-09!15;UBERON:0000463!1.62e-09!15;UBERON:0002106!2.17e-08!3;UBERON:0004854!2.17e-08!3;UBERON:0009034!2.17e-08!3;UBERON:0002095!2.17e-08!3;UBERON:0004782!2.17e-08!3;UBERON:0003281!2.17e-08!3;UBERON:0009664!2.17e-08!3;UBERON:0002296!2.17e-08!3;UBERON:0005602!2.17e-08!3;UBERON:0001179!2.17e-08!3;UBERON:0006293!2.17e-08!3 | |ontology_enrichment_uberon=UBERON:0007023!8.68e-31!115;UBERON:0000178!1.62e-09!15;UBERON:0000179!1.62e-09!15;UBERON:0000463!1.62e-09!15;UBERON:0002106!2.17e-08!3;UBERON:0004854!2.17e-08!3;UBERON:0009034!2.17e-08!3;UBERON:0002095!2.17e-08!3;UBERON:0004782!2.17e-08!3;UBERON:0003281!2.17e-08!3;UBERON:0009664!2.17e-08!3;UBERON:0002296!2.17e-08!3;UBERON:0005602!2.17e-08!3;UBERON:0001179!2.17e-08!3;UBERON:0006293!2.17e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.60e-10;2!UBERON:0004921;1.18e-08;33!UBERON:0001044;1.42e-07;6!UBERON:0003293;1.42e-07;6!UBERON:0003294;1.42e-07;6!UBERON:0010047;1.42e-07;6!UBERON:0003408;1.42e-07;6!UBERON:0000167;1.42e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001829;2.60e-10;2!UBERON:0004921;1.18e-08;33!UBERON:0001044;1.42e-07;6!UBERON:0003293;1.42e-07;6!UBERON:0003294;1.42e-07;6!UBERON:0010047;1.42e-07;6!UBERON:0003408;1.42e-07;6!UBERON:0000167;1.42e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.61e-17,114;UBERON:0001829,2.42e-10,2;UBERON:0001044,1.48e-07,6;UBERON:0003293,1.48e-07,6;UBERON:0003294,1.48e-07,6;UBERON:0010047,1.48e-07,6;UBERON:0000167,1.48e-07,6 | |||
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| ||
|short_description=p1@uc001yrw.1,p1@uc001ysj.2,p1@uc001ysk.1,p1@uc001ysl.1 | |short_description=p1@uc001yrw.1,p1@uc001ysj.2,p1@uc001ysk.1,p1@uc001ysl.1 | ||
}} | }} |
Latest revision as of 21:09, 18 September 2015
Short description: | p1@uc001yrw.1, p1@uc001ysj.2, p1@uc001ysk.1, p1@uc001ysl.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001yrw.1_5end, CAGE_peak_1_at_uc001ysj.2_5end, CAGE_peak_1_at_uc001ysk.1_5end, CAGE_peak_1_at_uc001ysl.1_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | 0bp_to_uc001yrw.1, uc001ysj.2, uc001ysk.1, uc001ysl.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.30e-65 | 24 |
pro-B cell | 1.30e-65 | 24 |
B cell | 7.33e-55 | 14 |
lymphoid lineage restricted progenitor cell | 7.57e-28 | 52 |
lymphocyte | 3.09e-27 | 53 |
common lymphoid progenitor | 3.09e-27 | 53 |
nongranular leukocyte | 4.56e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.77e-09 | 120 |
leukocyte | 6.88e-08 | 136 |
precursor B cell | 5.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.61e-17 | 114 |
major salivary gland | 2.42e-10 | 2 |
saliva-secreting gland | 1.48e-07 | 6 |
gland of oral region | 1.48e-07 | 6 |
gland of foregut | 1.48e-07 | 6 |
oral gland | 1.48e-07 | 6 |
oral cavity | 1.48e-07 | 6 |