FFCP PHASE1:Hg19::chr2:182543057..182543068,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E0X9P1 | |UniProt=E0X9P1 | ||
|association_with_transcript=-65bp_to_GQ904713_5end | |association_with_transcript=-65bp_to_GQ904713_5end | ||
|cluster_id=chr2:182543057..182543068,- | |||
|coexpression_cluster_id=C939 | |||
|description=CAGE_peak_1_at_GQ904713_5end | |description=CAGE_peak_1_at_GQ904713_5end | ||
|id=chr2:182543057..182543068,- | |id=chr2:182543057..182543068,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.94e-41;3 | |||
|ontology_enrichment_disease=DOID:3119!6.28e-07!14 | |ontology_enrichment_disease=DOID:3119!6.28e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;4.74e-09;14!DOID:154;6.80e-08;2!DOID:4236;6.80e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.19e-09,14;DOID:154,9.19e-08,2;DOID:4236,9.19e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;9.51e-21;6!UBERON:0002680;4.73e-14;9!UBERON:0001895;4.73e-14;9!UBERON:0004733;1.10e-10;12!UBERON:0002028;1.10e-10;12!UBERON:0004732;6.59e-10;13!UBERON:0006955;6.80e-08;2!UBERON:0004801;6.80e-08;2 | |||
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|short_description=p1@GQ904713 | |short_description=p1@GQ904713 | ||
}} | }} |
Latest revision as of 21:20, 18 September 2015
Short description: | p1@GQ904713 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GQ904713_5end |
Coexpression cluster: | C939_neuroblastoma_argyrophil_small_cerebellum_retinoblastoma_pineal_medulloblastoma |
Association with transcript: | -65bp_to_GQ904713_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.81e-21 | 6 |
rhombic lip | 6.81e-21 | 6 |
regional part of metencephalon | 3.79e-14 | 9 |
metencephalon | 3.79e-14 | 9 |
future metencephalon | 3.79e-14 | 9 |
segmental subdivision of hindbrain | 9.30e-11 | 12 |
hindbrain | 9.30e-11 | 12 |
presumptive hindbrain | 9.30e-11 | 12 |
segmental subdivision of nervous system | 5.66e-10 | 13 |
posterior neural tube | 1.03e-08 | 15 |
chordal neural plate | 1.03e-08 | 15 |
uterine epithelium | 5.74e-08 | 2 |
cervix epithelium | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.19e-09 | 14 |
mixed cell type cancer | 9.19e-08 | 2 |
carcinosarcoma | 9.19e-08 | 2 |