FFCP PHASE1:Hg19::chr2:182543057..182543068,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E0X9P1 | |UniProt=E0X9P1 | ||
|association_with_transcript=-65bp_to_GQ904713_5end | |||
|cluster_id=chr2:182543057..182543068,- | |||
|coexpression_cluster_id=C939 | |||
|description=CAGE_peak_1_at_GQ904713_5end | |||
|id=chr2:182543057..182543068,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.94e-41;3 | |||
|ontology_enrichment_disease=DOID:3119!6.28e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;4.74e-09;14!DOID:154;6.80e-08;2!DOID:4236;6.80e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.19e-09,14;DOID:154,9.19e-08,2;DOID:4236,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000955!4.66e-22!69;UBERON:0006238!4.66e-22!69;UBERON:0001049!1.36e-21!57;UBERON:0005068!1.36e-21!57;UBERON:0006241!1.36e-21!57;UBERON:0007135!1.36e-21!57;UBERON:0005743!1.71e-21!86;UBERON:0000073!2.30e-21!94;UBERON:0001016!2.30e-21!94;UBERON:0002616!9.23e-21!59;UBERON:0001017!2.55e-20!82;UBERON:0003075!1.98e-19!86;UBERON:0007284!1.98e-19!86;UBERON:0002346!2.13e-18!90;UBERON:0001869!2.53e-18!32;UBERON:0002619!3.31e-18!22;UBERON:0001893!3.67e-17!34;UBERON:0002780!9.03e-17!41;UBERON:0001890!9.03e-17!41;UBERON:0006240!9.03e-17!41;UBERON:0003080!2.51e-16!42;UBERON:0000956!6.12e-16!25;UBERON:0000203!6.12e-16!25;UBERON:0001950!6.62e-16!20;UBERON:0003056!8.40e-15!61;UBERON:0002791!1.24e-14!33;UBERON:0002020!3.63e-14!34;UBERON:0003528!3.63e-14!34;UBERON:0000033!7.19e-14!123;UBERON:0000153!4.84e-13!129;UBERON:0007811!4.84e-13!129;UBERON:0007023!4.93e-12!115;UBERON:0002680!8.31e-11!9;UBERON:0001895!8.31e-11!9;UBERON:0010092!8.31e-11!9;UBERON:0000349!1.29e-10!5;UBERON:0004121!3.99e-10!169;UBERON:0000924!8.51e-10!173;UBERON:0006601!8.51e-10!173;UBERON:0002037!8.83e-10!6;UBERON:0006215!8.83e-10!6;UBERON:0000200!9.54e-09!6;UBERON:0004733!4.01e-08!12;UBERON:0002028!4.01e-08!12;UBERON:0007277!4.01e-08!12;UBERON:0004732!1.68e-07!13;UBERON:0003112!6.88e-07!1;UBERON:0000032!6.88e-07!1;UBERON:0005253!6.88e-07!1;UBERON:0003128!6.88e-07!1;UBERON:0002241!6.88e-07!1;UBERON:0001703!6.88e-07!1;UBERON:0004761!6.88e-07!1;UBERON:0009617!6.88e-07!1;UBERON:0001871!7.50e-07!7;UBERON:0001882!7.73e-07!1;UBERON:0005403!7.73e-07!1;UBERON:0007190!9.18e-07!1;UBERON:0002581!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.51e-21;6!UBERON:0002680;4.73e-14;9!UBERON:0001895;4.73e-14;9!UBERON:0004733;1.10e-10;12!UBERON:0002028;1.10e-10;12!UBERON:0004732;6.59e-10;13!UBERON:0006955;6.80e-08;2!UBERON:0004801;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.81e-21,6;UBERON:0006215,6.81e-21,6;UBERON:0002680,3.79e-14,9;UBERON:0001895,3.79e-14,9;UBERON:0010092,3.79e-14,9;UBERON:0004733,9.30e-11,12;UBERON:0002028,9.30e-11,12;UBERON:0007277,9.30e-11,12;UBERON:0004732,5.66e-10,13;UBERON:0003076,1.03e-08,15;UBERON:0003057,1.03e-08,15;UBERON:0006955,5.74e-08,2;UBERON:0004801,5.74e-08,2 | |||
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|short_description=p1@GQ904713 | |||
}} | }} |
Latest revision as of 21:20, 18 September 2015
Short description: | p1@GQ904713 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GQ904713_5end |
Coexpression cluster: | C939_neuroblastoma_argyrophil_small_cerebellum_retinoblastoma_pineal_medulloblastoma |
Association with transcript: | -65bp_to_GQ904713_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.81e-21 | 6 |
rhombic lip | 6.81e-21 | 6 |
regional part of metencephalon | 3.79e-14 | 9 |
metencephalon | 3.79e-14 | 9 |
future metencephalon | 3.79e-14 | 9 |
segmental subdivision of hindbrain | 9.30e-11 | 12 |
hindbrain | 9.30e-11 | 12 |
presumptive hindbrain | 9.30e-11 | 12 |
segmental subdivision of nervous system | 5.66e-10 | 13 |
posterior neural tube | 1.03e-08 | 15 |
chordal neural plate | 1.03e-08 | 15 |
uterine epithelium | 5.74e-08 | 2 |
cervix epithelium | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.19e-09 | 14 |
mixed cell type cancer | 9.19e-08 | 2 |
carcinosarcoma | 9.19e-08 | 2 |