FFCP PHASE1:Hg19::chr17:17495433..17495461,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10400 | |EntrezGene=10400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |HGNC=8830 | ||
|TSSclassifier=strong | |||
|UniProt=A8MZ66 | |UniProt=A8MZ66 | ||
|association_with_transcript=-411bp_to_ENST00000395781_5end | |association_with_transcript=-411bp_to_ENST00000395781_5end | ||
|cluster_id=chr17:17495433..17495461,- | |||
|description=CAGE_peak_11_at_PEMT_5end | |description=CAGE_peak_11_at_PEMT_5end | ||
|id=chr17:17495433..17495461,- | |id=chr17:17495433..17495461,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002521;5.67e-28;3!CL:0000039;2.10e-12;7!CL:0000586;2.10e-12;7!CL:0000511;2.62e-10;1!CL:0002625;2.62e-10;1!CL:0000216;2.62e-10;1!CL:0000136;7.11e-07;13 | |ontology_enrichment_celltype_v019=CL:0002521;5.67e-28;3!CL:0000039;2.10e-12;7!CL:0000586;2.10e-12;7!CL:0000511;2.62e-10;1!CL:0002625;2.62e-10;1!CL:0000216;2.62e-10;1!CL:0000136;7.11e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002521,3.27e-28,3;CL:0000039,2.23e-12,7;CL:0000586,2.23e-12,7;CL:0000511,1.73e-10,1;CL:0002625,1.73e-10,1;CL:0000216,1.73e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.73e-09;10!UBERON:0005564;7.73e-09;10 | |ontology_enrichment_development_v019=UBERON:0009117;7.73e-09;10!UBERON:0005564;7.73e-09;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.62e-10;1!DOID:3371;2.62e-10;1!DOID:4549;2.62e-10;1!DOID:5861;2.62e-10;1!DOID:6496;2.62e-10;1!DOID:3149;2.62e-10;1 | |ontology_enrichment_disease_v019=DOID:3151;2.62e-10;1!DOID:3371;2.62e-10;1!DOID:4549;2.62e-10;1!DOID:5861;2.62e-10;1!DOID:6496;2.62e-10;1!DOID:3149;2.62e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,2.08e-10,1;DOID:4549,2.08e-10,1;DOID:5861,2.08e-10,1;DOID:6496,2.08e-10,1;DOID:3151,4.75e-10,1;DOID:3149,4.75e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004176!6.39e-07!22;UBERON:0000991!7.25e-07!21;UBERON:0009196!7.25e-07!21;UBERON:0009117!7.25e-07!21;UBERON:0005564!7.25e-07!21 | |ontology_enrichment_uberon=UBERON:0004176!6.39e-07!22;UBERON:0000991!7.25e-07!21;UBERON:0009196!7.25e-07!21;UBERON:0009117!7.25e-07!21;UBERON:0005564!7.25e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;5.67e-28;3!UBERON:0000473;1.75e-18;8!UBERON:0002072;4.75e-17;5!UBERON:0003135;1.64e-13;11!UBERON:0001013;9.31e-11;14!UBERON:0001136;2.62e-10;1!UBERON:0001343;2.62e-10;1!UBERON:0004910;2.62e-10;1!UBERON:0004813;2.62e-10;1!UBERON:0000991;3.73e-07;21!UBERON:0003101;7.79e-07;22!UBERON:0000079;7.79e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002190;5.67e-28;3!UBERON:0000473;1.75e-18;8!UBERON:0002072;4.75e-17;5!UBERON:0003135;1.64e-13;11!UBERON:0001013;9.31e-11;14!UBERON:0001136;2.62e-10;1!UBERON:0001343;2.62e-10;1!UBERON:0004910;2.62e-10;1!UBERON:0004813;2.62e-10;1!UBERON:0000991;3.73e-07;21!UBERON:0003101;7.79e-07;22!UBERON:0000079;7.79e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.27e-28,3;UBERON:0000473,1.53e-18,8;UBERON:0002072,3.42e-17,5;UBERON:0003135,1.49e-13,11;UBERON:0001013,8.20e-11,14;UBERON:0001136,1.73e-10,1;UBERON:0001343,1.73e-10,1;UBERON:0004910,1.73e-10,1;UBERON:0005154,1.73e-10,1;UBERON:0005295,1.73e-10,1;UBERON:0004813,1.73e-10,1;UBERON:0005297,1.73e-10,1;UBERON:0005294,1.73e-10,1;UBERON:0010141,1.73e-10,1;UBERON:0005891,1.73e-10,1;UBERON:0000991,3.55e-07,21;UBERON:0009196,3.55e-07,21;UBERON:0009117,3.55e-07,21;UBERON:0005564,3.55e-07,21;UBERON:0004176,7.44e-07,22;UBERON:0003101,7.44e-07,22;UBERON:0000079,7.44e-07,22 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0,0,5.06599756336621,1.89515962028049,1.30592814099919,0.737201809504527,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0.376627918784408,0.152826811495903,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0.637812899895131,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0.795285947051099,0,0,0,0.175669571386252,0.392937226493138,0,0.370784442784429,0.649094787309367,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0,0.354668382198357,1.12135520028461,0,0.98667019366864,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.300476117813194,0.340296549480063,0,0,0.423863802319124,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0.302256294682921,0.169560592310488,0,0.272746120590835,0.286804595389004,0.487894824518382,0.132529768321485,0.348581828608555,0.725627385107593,0.504641701751257,0.36497735907583,0,0,0,0,0.721879481669586,0.473227200159376,0.337169380156203,0.482022059766964,0.772057809126758,0.653638332277218,0.474541238222193,0.269662616320329,0.588664395376038,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0.603173834469785,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.517086863031111,3.57656445851882,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.630809660135739,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0.248107807818777,0,0.280660094433074,0.384417447767103,0,0,0,0,0.177561725313127,0.657017248110473,0,0.116210378459959,0.120859449591622,0,0.368323955743585,0.459257792658427,0.364182336013434,0.131124414959424,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0.650060246036521,1.6068392984416,0.290012154876366,0.462145851343933,0.614014698904518,0,0,0,0.0852266274161009,0.267096106940212,0.495854746082934,0,0,0.2023155617111,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0.390776190804081,0.556812347790485,1.23087398947712,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.83654246567162,0,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0.671286347903371,0.189753732724185,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0.296521128680622,0.617819694732514,0.626531697032732,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0,0.901940516486955,0.414752765588989,0,0,0,0,0.853828638089378,0.416024019039416,0,0.0979923974143777,0,0,0.343972064943233,0.483781656445426,0.146178634172371,0.574808199372465,0.0969890164884194,1.5003541537555,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,2.32991899054908,0.551482276150566,0.412079291905832,0.26961417541674,0,0.169346664131569,0,0,0,0,0.415440338029185,0,0,0.121499113316049,1.0063040627978,0,0,0,0,0.191915197319445,0,0,0.5085370753095,1.08599920350743,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0.293104467356165,2.65013777824443,0,0.13223260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| ||
|short_description=p11@PEMT | |short_description=p11@PEMT | ||
}} | }} |
Latest revision as of 21:52, 18 September 2015
Short description: | p11@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PEMT_5end |
Coexpression cluster: | NA |
Association with transcript: | -411bp_to_ENST00000395781_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | A8MZ66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 3.27e-28 | 3 |
germ line cell | 2.23e-12 | 7 |
germ cell | 2.23e-12 | 7 |
androgen binding protein secreting cell | 1.73e-10 | 1 |
seminiferous tubule epithelial cell | 1.73e-10 | 1 |
Sertoli cell | 1.73e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.27e-28 | 3 |
testis | 1.53e-18 | 8 |
hypodermis | 3.42e-17 | 5 |
male reproductive organ | 1.49e-13 | 11 |
adipose tissue | 8.20e-11 | 14 |
mesothelium | 1.73e-10 | 1 |
seminiferous tubule of testis | 1.73e-10 | 1 |
epithelium of male gonad | 1.73e-10 | 1 |
epithelial cord | 1.73e-10 | 1 |
sex cord | 1.73e-10 | 1 |
seminiferous tubule epithelium | 1.73e-10 | 1 |
testis sex cord | 1.73e-10 | 1 |
genital ridge | 1.73e-10 | 1 |
primitive sex cord of indifferent gonad | 1.73e-10 | 1 |
coelomic epithelium | 1.73e-10 | 1 |
gonad | 3.55e-07 | 21 |
indifferent external genitalia | 3.55e-07 | 21 |
indifferent gonad | 3.55e-07 | 21 |
gonad primordium | 3.55e-07 | 21 |
external genitalia | 7.44e-07 | 22 |
male organism | 7.44e-07 | 22 |
male reproductive system | 7.44e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.08e-10 | 1 |
extraosseous chondrosarcoma | 2.08e-10 | 1 |
myxoid chondrosarcoma | 2.08e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 2.08e-10 | 1 |
skin squamous cell carcinoma | 4.75e-10 | 1 |
keratoacanthoma | 4.75e-10 | 1 |