FFCP PHASE1:Hg19::chr4:82136311..82136326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5593 | |EntrezGene=5593 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9416 | |HGNC=9416 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPE6 | |UniProt=E7EPE6 | ||
|association_with_transcript=-93bp_to_ENST00000418486,uc011cch.1_5end | |association_with_transcript=-93bp_to_ENST00000418486,uc011cch.1_5end | ||
|cluster_id=chr4:82136311..82136326,- | |||
|coexpression_cluster_id=C4434 | |||
|description=CAGE_peak_2_at_PRKG2_5end | |description=CAGE_peak_2_at_PRKG2_5end | ||
|id=chr4:82136311..82136326,- | |id=chr4:82136311..82136326,- | ||
|ontology_enrichment_celltype=CL:0002620!4.27e-07!23 | |ontology_enrichment_celltype=CL:0002620!4.27e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.44e-13;2!CL:0000242;1.44e-13;2!CL:0000097;1.25e-12;5!CL:0000037;6.36e-08;1!CL:0001024;6.36e-08;1!CL:0000163;3.29e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.98e-13,2;CL:0000097,1.28e-12,5;CL:0002028,1.28e-12,5;CL:0001024,6.80e-08,1;CL:0000163,3.33e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.55e-08;1!UBERON:0005425;1.85e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;4.72e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,4.57e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.29e-30!82;UBERON:0002616!4.19e-29!59;UBERON:0005743!6.84e-29!86;UBERON:0001049!2.59e-28!57;UBERON:0005068!2.59e-28!57;UBERON:0006241!2.59e-28!57;UBERON:0007135!2.59e-28!57;UBERON:0000073!1.42e-27!94;UBERON:0001016!1.42e-27!94;UBERON:0000955!5.28e-27!69;UBERON:0006238!5.28e-27!69;UBERON:0002780!4.09e-25!41;UBERON:0001890!4.09e-25!41;UBERON:0006240!4.09e-25!41;UBERON:0003080!2.74e-24!42;UBERON:0007023!4.81e-22!115;UBERON:0003075!5.89e-22!86;UBERON:0007284!5.89e-22!86;UBERON:0002346!1.83e-21!90;UBERON:0001893!4.25e-21!34;UBERON:0002020!4.50e-21!34;UBERON:0003528!4.50e-21!34;UBERON:0002791!5.11e-20!33;UBERON:0001869!3.61e-19!32;UBERON:0002619!5.57e-17!22;UBERON:0003056!5.90e-17!61;UBERON:0001950!7.13e-17!20;UBERON:0004121!9.81e-15!169;UBERON:0000924!1.08e-14!173;UBERON:0006601!1.08e-14!173;UBERON:0000956!2.30e-14!25;UBERON:0000203!2.30e-14!25;UBERON:0000033!1.00e-13!123;UBERON:0000153!1.82e-12!129;UBERON:0007811!1.82e-12!129;UBERON:0002420!4.26e-09!9;UBERON:0007245!4.26e-09!9;UBERON:0010009!4.26e-09!9;UBERON:0010011!4.26e-09!9;UBERON:0000454!4.26e-09!9;UBERON:0000475!5.10e-09!365;UBERON:0001871!8.73e-09!7;UBERON:0002308!2.36e-08!9;UBERON:0000125!2.36e-08!9;UBERON:0000119!2.93e-08!312;UBERON:0000483!4.60e-08!309;UBERON:0000062!5.34e-08!511;UBERON:0002298!1.00e-07!8;UBERON:0002021!2.27e-07!5;UBERON:0000025!4.59e-07!194;UBERON:0000064!7.09e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;8.32e-12;4!UBERON:0002079;8.55e-08;1!UBERON:0000941;1.85e-07;1!UBERON:0001785;1.85e-07;1!UBERON:0002464;1.85e-07;1!UBERON:0004904;1.85e-07;1!UBERON:0001021;1.85e-07;1!UBERON:0003296;2.59e-07;4!UBERON:0010133;2.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.05e-12,4;UBERON:0002079,7.26e-08,1;UBERON:0001016,1.75e-07,89;UBERON:0000941,1.91e-07,1;UBERON:0001785,1.91e-07,1;UBERON:0002464,1.91e-07,1;UBERON:0004904,1.91e-07,1;UBERON:0001021,1.91e-07,1;UBERON:0003902,1.91e-07,1;UBERON:0005425,1.91e-07,1;UBERON:0003296,3.18e-07,4;UBERON:0010133,3.18e-07,4 | |||
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| ||
|short_description=p2@PRKG2 | |short_description=p2@PRKG2 | ||
}} | }} |
Latest revision as of 22:54, 18 September 2015
Short description: | p2@PRKG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKG2_5end |
Coexpression cluster: | C4434_Mast_acute_small_pineal_CD34_CD133_anaplastic |
Association with transcript: | -93bp_to_ENST00000418486, uc011cch.1_5end |
EntrezGene: | PRKG2 |
HGNC: | 9416 |
UniProt: | E7EPE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.98e-13 | 2 |
mast cell | 1.28e-12 | 5 |
basophil mast progenitor cell | 1.28e-12 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.80e-08 | 1 |
endocrine cell | 3.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.05e-12 | 4 |
left cardiac atrium | 7.26e-08 | 1 |
nervous system | 1.75e-07 | 89 |
cranial nerve II | 1.91e-07 | 1 |
cranial nerve | 1.91e-07 | 1 |
nerve trunk | 1.91e-07 | 1 |
nerve connecting eye with brain | 1.91e-07 | 1 |
nerve | 1.91e-07 | 1 |
retinal neural layer | 1.91e-07 | 1 |
presumptive neural retina | 1.91e-07 | 1 |
gland of diencephalon | 3.18e-07 | 4 |
neuroendocrine gland | 3.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 4.57e-08 | 1 |