FFCP PHASE1:Hg19::chr4:82136311..82136326,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5593 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9416 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPE6 | |||
|association_with_transcript=-93bp_to_ENST00000418486,uc011cch.1_5end | |||
|cluster_id=chr4:82136311..82136326,- | |||
|coexpression_cluster_id=C4434 | |||
|description=CAGE_peak_2_at_PRKG2_5end | |||
|id=chr4:82136311..82136326,- | |||
|ontology_enrichment_celltype=CL:0002620!4.27e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.44e-13;2!CL:0000242;1.44e-13;2!CL:0000097;1.25e-12;5!CL:0000037;6.36e-08;1!CL:0001024;6.36e-08;1!CL:0000163;3.29e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.98e-13,2;CL:0000097,1.28e-12,5;CL:0002028,1.28e-12,5;CL:0001024,6.80e-08,1;CL:0000163,3.33e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.55e-08;1!UBERON:0005425;1.85e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;4.72e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,4.57e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.29e-30!82;UBERON:0002616!4.19e-29!59;UBERON:0005743!6.84e-29!86;UBERON:0001049!2.59e-28!57;UBERON:0005068!2.59e-28!57;UBERON:0006241!2.59e-28!57;UBERON:0007135!2.59e-28!57;UBERON:0000073!1.42e-27!94;UBERON:0001016!1.42e-27!94;UBERON:0000955!5.28e-27!69;UBERON:0006238!5.28e-27!69;UBERON:0002780!4.09e-25!41;UBERON:0001890!4.09e-25!41;UBERON:0006240!4.09e-25!41;UBERON:0003080!2.74e-24!42;UBERON:0007023!4.81e-22!115;UBERON:0003075!5.89e-22!86;UBERON:0007284!5.89e-22!86;UBERON:0002346!1.83e-21!90;UBERON:0001893!4.25e-21!34;UBERON:0002020!4.50e-21!34;UBERON:0003528!4.50e-21!34;UBERON:0002791!5.11e-20!33;UBERON:0001869!3.61e-19!32;UBERON:0002619!5.57e-17!22;UBERON:0003056!5.90e-17!61;UBERON:0001950!7.13e-17!20;UBERON:0004121!9.81e-15!169;UBERON:0000924!1.08e-14!173;UBERON:0006601!1.08e-14!173;UBERON:0000956!2.30e-14!25;UBERON:0000203!2.30e-14!25;UBERON:0000033!1.00e-13!123;UBERON:0000153!1.82e-12!129;UBERON:0007811!1.82e-12!129;UBERON:0002420!4.26e-09!9;UBERON:0007245!4.26e-09!9;UBERON:0010009!4.26e-09!9;UBERON:0010011!4.26e-09!9;UBERON:0000454!4.26e-09!9;UBERON:0000475!5.10e-09!365;UBERON:0001871!8.73e-09!7;UBERON:0002308!2.36e-08!9;UBERON:0000125!2.36e-08!9;UBERON:0000119!2.93e-08!312;UBERON:0000483!4.60e-08!309;UBERON:0000062!5.34e-08!511;UBERON:0002298!1.00e-07!8;UBERON:0002021!2.27e-07!5;UBERON:0000025!4.59e-07!194;UBERON:0000064!7.09e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;8.32e-12;4!UBERON:0002079;8.55e-08;1!UBERON:0000941;1.85e-07;1!UBERON:0001785;1.85e-07;1!UBERON:0002464;1.85e-07;1!UBERON:0004904;1.85e-07;1!UBERON:0001021;1.85e-07;1!UBERON:0003296;2.59e-07;4!UBERON:0010133;2.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.05e-12,4;UBERON:0002079,7.26e-08,1;UBERON:0001016,1.75e-07,89;UBERON:0000941,1.91e-07,1;UBERON:0001785,1.91e-07,1;UBERON:0002464,1.91e-07,1;UBERON:0004904,1.91e-07,1;UBERON:0001021,1.91e-07,1;UBERON:0003902,1.91e-07,1;UBERON:0005425,1.91e-07,1;UBERON:0003296,3.18e-07,4;UBERON:0010133,3.18e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81680571135301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,1.68152568894461,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.622422070799533,0,0,0.605429710579726,0,0,1.24864030732128,0,0.448346041655403,0.117434498643765,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0.847727604638247,0,0.309157587715317,0,0.37223371266318,0.168776332241266,0.194874010322397,0.504867548488229,0.828449087780694,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04915592838625,8.93543711185161,4.4184851699233,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0.887808626565635,0.410635780069046,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,1.48863347743867,0,0.38126038784765,0,0.855877976067841,0.95460974377781,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66065526394986,0,0,0.439524537815682,0,0,0,0,0,0,3.97659059106519,0.703347082052564,1.78093928036649,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.361789315876224,0,0.331737779793674,0,1.09692698576986,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.442287822516696,1.22206028986725,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0,0,0,2.41981432097328,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.569797163602908,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0.137539436597234,0,0,0,0.607495566580247,0,0.157611414598396,0.209818352539992,0,0,0,2.85878130549347,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0,0.573409195690071,0.110929051536852,0.248385611765534,0.276697269872462,0,0,0,0,1.40500471742064,2.17381542916238,0,0.701139929541673,1.66441758450784,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,1.02315497042921,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,2.8339315265117,0.319267718114302,0.205116364240755,0.756215088665154,0.414943514785307,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.507326481551255,2.18789923607288,0,0,0,0,5.35701835878287,0.336283722218824,0,1.13831095675649,0,0,0,1.42736439251347,0.394636641377094,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,1.46630900405095,2.84127428655144,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0.352894871715692,0,0,0,0.716697915757256,0,0.203974470572744,0.872701380680755,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p2@PRKG2 | |||
}} |
Latest revision as of 22:54, 18 September 2015
Short description: | p2@PRKG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKG2_5end |
Coexpression cluster: | C4434_Mast_acute_small_pineal_CD34_CD133_anaplastic |
Association with transcript: | -93bp_to_ENST00000418486, uc011cch.1_5end |
EntrezGene: | PRKG2 |
HGNC: | 9416 |
UniProt: | E7EPE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.98e-13 | 2 |
mast cell | 1.28e-12 | 5 |
basophil mast progenitor cell | 1.28e-12 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.80e-08 | 1 |
endocrine cell | 3.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.05e-12 | 4 |
left cardiac atrium | 7.26e-08 | 1 |
nervous system | 1.75e-07 | 89 |
cranial nerve II | 1.91e-07 | 1 |
cranial nerve | 1.91e-07 | 1 |
nerve trunk | 1.91e-07 | 1 |
nerve connecting eye with brain | 1.91e-07 | 1 |
nerve | 1.91e-07 | 1 |
retinal neural layer | 1.91e-07 | 1 |
presumptive neural retina | 1.91e-07 | 1 |
gland of diencephalon | 3.18e-07 | 4 |
neuroendocrine gland | 3.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 4.57e-08 | 1 |