FFCP PHASE1:Hg19::chr15:73976715..73976760,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:73976715..73976760,+
|short_description=p1@CD276
|description=CAGE_peak_1_at_CD276_5end
|association_with_transcript=0bp_to_ENST00000379823,ENST0000053734...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80381 | |EntrezGene=80381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19137 | |HGNC=19137 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYM9 | |UniProt=F5GYM9 | ||
|association_with_transcript=0bp_to_ENST00000379823,ENST00000537340,ENST00000543481,ENST00000558689,ENST00000561213_5end | |||
|cluster_id=chr15:73976715..73976760,+ | |||
|coexpression_cluster_id=C3511 | |||
|description=CAGE_peak_1_at_CD276_5end | |||
|id=chr15:73976715..73976760,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.62e-29!180;CL:0000548!1.48e-20!679;CL:0000004!1.48e-20!679;CL:0000255!1.48e-20!679;CL:0002321!2.87e-20!248;CL:0000220!5.73e-20!246;CL:0000012!2.51e-19!682;CL:0000144!7.30e-18!625;CL:0002371!2.74e-14!591;CL:0000057!4.05e-14!75;CL:0000222!5.25e-14!119;CL:0000183!9.42e-11!59;CL:0000066!1.39e-10!254;CL:0000680!1.16e-09!57;CL:0000056!1.16e-09!57;CL:0000355!1.16e-09!57;CL:0000393!1.88e-09!60;CL:0000211!1.88e-09!60;CL:0000187!3.36e-09!54;CL:0000192!8.37e-09!42;CL:0000514!8.37e-09!42;CL:0000003!2.79e-08!722;CL:0000325!1.45e-07!39;CL:0000075!4.76e-07!27;CL:0000221!8.92e-07!71;CL:0002334!9.95e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;5.37e-10;55!CL:0000723;2.60e-09;61!CL:0000048;2.90e-09;58!CL:0000349;3.46e-08;19!CL:0000034;2.97e-07;69!CL:0000075;4.53e-07;27!CL:0002334;8.83e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.20e-20,250;CL:0000057,4.28e-14,76;CL:0000222,5.41e-14,121;CL:0000066,2.08e-10,253;CL:0000680,1.03e-09,58;CL:0000056,1.03e-09,58;CL:0000355,1.03e-09,58;CL:0000393,1.65e-09,61;CL:0000211,1.65e-09,61;CL:0000187,2.99e-09,55;CL:0000192,7.78e-09,43;CL:0000514,7.78e-09,43;CL:0000349,3.33e-08,19;CL:0000075,4.50e-07,27;CL:0000221,6.82e-07,72;CL:0002334,9.44e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.76e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.06e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.45e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!3.59e-14!659;UBERON:0005256!2.55e-13!143;UBERON:0002100!3.45e-13!216;UBERON:0003914!1.19e-12!118;UBERON:0000914!7.75e-11!83;UBERON:0002329!7.75e-11!83;UBERON:0003077!7.75e-11!83;UBERON:0003059!7.75e-11!83;UBERON:0007282!7.75e-11!83;UBERON:0009618!7.75e-11!83;UBERON:0007285!7.75e-11!83;UBERON:0000486!1.43e-10!82;UBERON:0004872!2.79e-10!84;UBERON:0000467!1.40e-09!625;UBERON:0002049!1.75e-09!79;UBERON:0007798!1.75e-09!79;UBERON:0000926!1.90e-09!448;UBERON:0004120!1.90e-09!448;UBERON:0006603!1.90e-09!448;UBERON:0004290!1.92e-09!70;UBERON:0000480!2.62e-09!626;UBERON:0003104!3.12e-09!238;UBERON:0009142!3.12e-09!238;UBERON:0000490!4.46e-09!138;UBERON:0000475!5.21e-09!365;UBERON:0000922!9.54e-09!612;UBERON:0001134!1.17e-08!61;UBERON:0002036!1.17e-08!61;UBERON:0003082!1.17e-08!61;UBERON:0002385!3.76e-08!63;UBERON:0001015!3.76e-08!63;UBERON:0000383!3.76e-08!63;UBERON:0000119!5.52e-08!312;UBERON:0002050!5.94e-08!605;UBERON:0005423!5.94e-08!605;UBERON:0000923!6.08e-08!604;UBERON:0005291!6.08e-08!604;UBERON:0006598!6.08e-08!604;UBERON:0002532!6.08e-08!604;UBERON:0001981!7.33e-08!60;UBERON:0007500!7.33e-08!60;UBERON:0004537!7.33e-08!60;UBERON:0006965!7.33e-08!60;UBERON:0001637!7.48e-08!42;UBERON:0003509!7.48e-08!42;UBERON:0004572!7.48e-08!42;UBERON:0000483!9.13e-08!309;UBERON:0001013!2.12e-07!14;UBERON:0000481!4.06e-07!347;UBERON:0000055!7.00e-07!69;UBERON:0003102!8.30e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.97e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.18e-12,117;UBERON:0003104,1.31e-12,160;UBERON:0009142,1.31e-12,160;UBERON:0002100,3.60e-12,199;UBERON:0007503,3.75e-11,78;UBERON:0000486,1.54e-10,83;UBERON:0004872,2.71e-10,83;UBERON:0000490,5.26e-10,148;UBERON:0005256,1.34e-09,122;UBERON:0002049,1.49e-09,78;UBERON:0007798,1.49e-09,78;UBERON:0002329,1.66e-09,71;UBERON:0003059,1.66e-09,71;UBERON:0007282,1.66e-09,71;UBERON:0004290,1.66e-09,71;UBERON:0009618,1.66e-09,71;UBERON:0007524,2.29e-09,73;UBERON:0003077,3.56e-09,72;UBERON:0007285,3.56e-09,72;UBERON:0001134,1.03e-08,62;UBERON:0002036,1.03e-08,62;UBERON:0003082,1.03e-08,62;UBERON:0000119,3.04e-08,309;UBERON:0002385,3.27e-08,64;UBERON:0001015,3.27e-08,64;UBERON:0000383,3.27e-08,64;UBERON:0004923,4.45e-08,66;UBERON:0000483,5.07e-08,306;UBERON:0007500,6.25e-08,59;UBERON:0001981,6.25e-08,59;UBERON:0004537,6.25e-08,59;UBERON:0006965,6.25e-08,59;UBERON:0001637,7.02e-08,42;UBERON:0003509,7.02e-08,42;UBERON:0004572,7.02e-08,42;UBERON:0001013,2.00e-07,14;UBERON:0003102,4.36e-07,99;UBERON:0000055,5.95e-07,68 | |||
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| ||
|short_description=p1@CD276 | |||
}} | }} |
Latest revision as of 23:45, 18 September 2015
Short description: | p1@CD276 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD276_5end |
Coexpression cluster: | C3511_Mesenchymal_Dendritic_Macrophage_Hepatic_Renal_Osteoblast_Melanocyte |
Association with transcript: | 0bp_to_ENST00000379823, ENST00000537340, ENST00000543481, ENST00000558689, ENST00000561213_5end |
EntrezGene: | CD276 |
HGNC: | 19137 |
UniProt: | F5GYM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.20e-20 | 250 |
fibroblast | 4.28e-14 | 76 |
mesodermal cell | 5.41e-14 | 121 |
epithelial cell | 2.08e-10 | 253 |
muscle precursor cell | 1.03e-09 | 58 |
myoblast | 1.03e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-09 | 58 |
electrically responsive cell | 1.65e-09 | 61 |
electrically active cell | 1.65e-09 | 61 |
muscle cell | 2.99e-09 | 55 |
smooth muscle cell | 7.78e-09 | 43 |
smooth muscle myoblast | 7.78e-09 | 43 |
extraembryonic cell | 3.33e-08 | 19 |
columnar/cuboidal epithelial cell | 4.50e-07 | 27 |
ectodermal cell | 6.82e-07 | 72 |
preadipocyte | 9.44e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.45e-07 | 14 |