FFCP PHASE1:Hg19::chr19:48613876..48613886,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8605 | |EntrezGene=8605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9037 | |HGNC=9037 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UP65,B4DI40 | |UniProt=Q9UP65,B4DI40 | ||
|association_with_transcript=222bp_to_ENST00000354276,NM_001159322,NM_001159323,NM_003706,uc002phx.2,uc002phy.3,uc010elr.2,uc010xzd.1_5end | |association_with_transcript=222bp_to_ENST00000354276,NM_001159322,NM_001159323,NM_003706,uc002phx.2,uc002phy.3,uc010elr.2,uc010xzd.1_5end | ||
|cluster_id=chr19:48613876..48613886,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_7_at_PLA2G4C_5end | |description=CAGE_peak_7_at_PLA2G4C_5end | ||
|id=chr19:48613876..48613886,- | |id=chr19:48613876..48613886,- | ||
|ontology_enrichment_celltype=CL:0002139!8.31e-17!24;CL:0005020!5.32e-16!6;CL:0002138!5.32e-16!6;CL:0005022!5.32e-16!6;CL:0000213!5.55e-11!57;CL:0000215!5.55e-11!57;CL:0000115!9.73e-11!35;CL:0002078!1.34e-09!44;CL:0000071!7.04e-07!18;CL:0002546!7.04e-07!18;CL:1000413!9.99e-07!9 | |ontology_enrichment_celltype=CL:0002139!8.31e-17!24;CL:0005020!5.32e-16!6;CL:0002138!5.32e-16!6;CL:0005022!5.32e-16!6;CL:0000213!5.55e-11!57;CL:0000215!5.55e-11!57;CL:0000115!9.73e-11!35;CL:0002078!1.34e-09!44;CL:0000071!7.04e-07!18;CL:0002546!7.04e-07!18;CL:1000413!9.99e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.99e-87;6!CL:0002139;1.48e-34;24!CL:0000115;2.87e-20;36!CL:0002078;2.69e-14;45!CL:0002144;2.45e-12;3!CL:0000213;5.68e-09;58!CL:0000215;5.68e-09;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.34e-87,6;CL:0002138,3.34e-87,6;CL:0005022,3.34e-87,6;CL:0002139,1.48e-34,24;CL:0000115,2.92e-23,36;CL:0002078,9.94e-19,45;CL:0000213,1.18e-14,58;CL:0000215,1.18e-14,58;CL:0002144,2.31e-12,3;CL:0000222,3.07e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;2.99e-87;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001473;1.09e-65;8!UBERON:0004536;1.09e-65;8!UBERON:0006558;1.09e-65;8!UBERON:0002465;9.63e-53;10!UBERON:0002405;4.87e-20;27!UBERON:0002193;6.91e-13;42!UBERON:0010523;2.45e-12;3!UBERON:0001915;2.45e-12;3!UBERON:0001982;2.45e-12;3!UBERON:0000055;1.03e-11;65!UBERON:0002049;9.96e-09;75!UBERON:0007798;9.96e-09;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.18e-65,8;UBERON:0004536,1.18e-65,8;UBERON:0006558,1.18e-65,8;UBERON:0002465,1.03e-52,10;UBERON:0000055,1.43e-12,68;UBERON:0010523,2.31e-12,3;UBERON:0001915,2.31e-12,3;UBERON:0001982,2.31e-12,3;UBERON:0002049,5.10e-11,78;UBERON:0007798,5.10e-11,78;UBERON:0004535,5.35e-08,109;UBERON:0001009,8.57e-08,112 | |||
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| ||
|short_description=p7@PLA2G4C | |short_description=p7@PLA2G4C | ||
}} | }} |
Latest revision as of 01:25, 19 September 2015
Short description: | p7@PLA2G4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PLA2G4C_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 222bp_to_ENST00000354276, NM_001159322, NM_001159323, NM_003706, uc002phx.2, uc002phy.3, uc010elr.2, uc010xzd.1_5end |
EntrezGene: | PLA2G4C |
HGNC: | 9037 |
UniProt: | Q9UP65B4DI40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.34e-87 | 6 |
endothelial cell of lymphatic vessel | 3.34e-87 | 6 |
vascular lymphangioblast | 3.34e-87 | 6 |
endothelial cell of vascular tree | 1.48e-34 | 24 |
endothelial cell | 2.92e-23 | 36 |
meso-epithelial cell | 9.94e-19 | 45 |
lining cell | 1.18e-14 | 58 |
barrier cell | 1.18e-14 | 58 |
capillary endothelial cell | 2.31e-12 | 3 |
mesodermal cell | 3.07e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.18e-65 | 8 |
lymph vasculature | 1.18e-65 | 8 |
lymphatic part of lymphoid system | 1.18e-65 | 8 |
lymphoid system | 1.03e-52 | 10 |
vessel | 1.43e-12 | 68 |
microcirculatory vessel | 2.31e-12 | 3 |
endothelium of capillary | 2.31e-12 | 3 |
capillary | 2.31e-12 | 3 |
vasculature | 5.10e-11 | 78 |
vascular system | 5.10e-11 | 78 |
cardiovascular system | 5.35e-08 | 109 |
circulatory system | 8.57e-08 | 112 |