FFCP PHASE1:Hg19::chr19:48753064..48753095,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22900 | |EntrezGene=22900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17057 | |HGNC=17057 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z7N9,E5RHJ3,E5RHZ3,G3XAM9,E5RIN1 | |UniProt=B7Z7N9,E5RHJ3,E5RHZ3,G3XAM9,E5RIN1 | ||
|association_with_transcript=0bp_to_ENST00000357778,ENST00000518596,ENST00000519302,ENST00000519646,ENST00000520015,ENST00000520153,ENST00000521092,ENST00000522051,ENST00000522773_5end | |association_with_transcript=0bp_to_ENST00000357778,ENST00000518596,ENST00000519302,ENST00000519646,ENST00000520015,ENST00000520153,ENST00000521092,ENST00000522051,ENST00000522773_5end | ||
|cluster_id=chr19:48753064..48753095,- | |||
|coexpression_cluster_id=C560 | |||
|description=CAGE_peak_1_at_CARD8_5end | |description=CAGE_peak_1_at_CARD8_5end | ||
|id=chr19:48753064..48753095,- | |id=chr19:48753064..48753095,- | ||
|ontology_enrichment_celltype=CL:0000037!9.66e-57!172;CL:0000566!9.66e-57!172;CL:0002032!4.50e-54!165;CL:0000837!4.50e-54!165;CL:0000988!1.22e-50!182;CL:0000738!4.26e-45!140;CL:0000763!1.80e-44!112;CL:0000049!1.80e-44!112;CL:0002031!6.36e-38!124;CL:0002087!1.12e-36!119;CL:0000766!1.07e-34!76;CL:0000557!1.79e-30!71;CL:0000839!2.31e-29!70;CL:0002009!4.24e-28!65;CL:0002194!1.17e-27!63;CL:0000576!1.17e-27!63;CL:0000040!1.17e-27!63;CL:0000559!1.17e-27!63;CL:0002057!2.29e-25!42;CL:0000860!1.30e-22!45;CL:0002139!2.56e-16!24;CL:0000115!5.24e-16!35;CL:0000071!8.22e-13!18;CL:0002546!8.22e-13!18;CL:0002078!2.08e-09!44;CL:0000542!3.36e-09!53;CL:0000051!3.36e-09!53;CL:0000838!3.50e-09!52;CL:1000413!4.91e-07!9;CL:0000945!6.77e-07!24;CL:0000826!6.77e-07!24 | |ontology_enrichment_celltype=CL:0000037!9.66e-57!172;CL:0000566!9.66e-57!172;CL:0002032!4.50e-54!165;CL:0000837!4.50e-54!165;CL:0000988!1.22e-50!182;CL:0000738!4.26e-45!140;CL:0000763!1.80e-44!112;CL:0000049!1.80e-44!112;CL:0002031!6.36e-38!124;CL:0002087!1.12e-36!119;CL:0000766!1.07e-34!76;CL:0000557!1.79e-30!71;CL:0000839!2.31e-29!70;CL:0002009!4.24e-28!65;CL:0002194!1.17e-27!63;CL:0000576!1.17e-27!63;CL:0000040!1.17e-27!63;CL:0000559!1.17e-27!63;CL:0002057!2.29e-25!42;CL:0000860!1.30e-22!45;CL:0002139!2.56e-16!24;CL:0000115!5.24e-16!35;CL:0000071!8.22e-13!18;CL:0002546!8.22e-13!18;CL:0002078!2.08e-09!44;CL:0000542!3.36e-09!53;CL:0000051!3.36e-09!53;CL:0000838!3.50e-09!52;CL:1000413!4.91e-07!9;CL:0000945!6.77e-07!24;CL:0000826!6.77e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.61e-20;33!CL:0002057;6.61e-20;33!CL:0000576;1.30e-19;48!CL:0000473;4.13e-19;39!CL:0000234;4.13e-19;39!CL:0002139;1.46e-17;24!CL:0000766;3.18e-17;69!CL:0000763;3.27e-16;100!CL:0000115;1.87e-15;36!CL:0000071;9.48e-14;18!CL:0002087;5.27e-12;104!CL:0000738;2.06e-11;136!CL:0000988;1.65e-10;177!CL:0002078;7.52e-08;45!CL:1000413;1.68e-07;9!CL:0000945;6.68e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.55e-61,168;CL:0002032,6.59e-59,161;CL:0000837,6.59e-59,161;CL:0000988,1.34e-54,177;CL:0000763,6.79e-50,108;CL:0000049,6.79e-50,108;CL:0000738,1.35e-49,136;CL:0002031,2.25e-42,120;CL:0002087,4.82e-41,115;CL:0000766,8.80e-41,72;CL:0000557,4.73e-36,67;CL:0000839,8.61e-35,66;CL:0002009,1.66e-33,61;CL:0002194,4.49e-33,59;CL:0000576,4.49e-33,59;CL:0000040,4.49e-33,59;CL:0000559,4.49e-33,59;CL:0000473,2.88e-30,48;CL:0000234,2.88e-30,48;CL:0000860,2.41e-27,42;CL:0002057,2.41e-27,42;CL:0000115,4.45e-18,36;CL:0002139,1.53e-17,24;CL:0000071,9.63e-14,18;CL:0002546,9.63e-14,18;CL:0002078,2.28e-11,45;CL:0000542,3.18e-09,53;CL:0000051,3.18e-09,53;CL:0000838,3.37e-09,52;CL:1000413,1.72e-07,9;CL:0002393,5.93e-07,9;CL:0002397,5.93e-07,9;CL:0000945,6.04e-07,24;CL:0000826,6.04e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-19;42!CL:0000049;2.61e-14;108!CL:0002546;9.48e-14;18 | |||
|ontology_enrichment_disease=DOID:8692!1.24e-10!31;DOID:2531!2.33e-10!51;DOID:0060083!2.33e-10!51;DOID:1240!5.08e-10!39 | |ontology_enrichment_disease=DOID:8692!1.24e-10!31;DOID:2531!2.33e-10!51;DOID:0060083!2.33e-10!51;DOID:1240!5.08e-10!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.10e-10;31!DOID:1240;9.57e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.54e-10,31;DOID:1240,1.20e-09,39;DOID:2531,4.02e-09,51;DOID:0060083,4.02e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.07e-36!112;UBERON:0002390!1.14e-32!102;UBERON:0003061!1.14e-32!102;UBERON:0002371!1.13e-25!80;UBERON:0002405!1.22e-24!115;UBERON:0001474!3.12e-22!86;UBERON:0007023!1.40e-21!115;UBERON:0003081!9.48e-19!216;UBERON:0004765!5.05e-15!101;UBERON:0001434!5.05e-15!101;UBERON:0001986!8.22e-13!18;UBERON:0004638!8.22e-13!18;UBERON:0004852!8.22e-13!18;UBERON:0000487!1.15e-08!22;UBERON:0003915!4.91e-07!9;UBERON:0004700!4.91e-07!9;UBERON:0001917!4.91e-07!9 | |ontology_enrichment_uberon=UBERON:0002193!3.07e-36!112;UBERON:0002390!1.14e-32!102;UBERON:0003061!1.14e-32!102;UBERON:0002371!1.13e-25!80;UBERON:0002405!1.22e-24!115;UBERON:0001474!3.12e-22!86;UBERON:0007023!1.40e-21!115;UBERON:0003081!9.48e-19!216;UBERON:0004765!5.05e-15!101;UBERON:0001434!5.05e-15!101;UBERON:0001986!8.22e-13!18;UBERON:0004638!8.22e-13!18;UBERON:0004852!8.22e-13!18;UBERON:0000487!1.15e-08!22;UBERON:0003915!4.91e-07!9;UBERON:0004700!4.91e-07!9;UBERON:0001917!4.91e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.48e-14;18!UBERON:0001986;9.48e-14;18!UBERON:0004852;9.48e-14;18!UBERON:0000487;1.29e-09;22!UBERON:0003915;1.68e-07;9!UBERON:0004700;1.68e-07;9!UBERON:0001917;1.68e-07;9!UBERON:0006914;1.75e-07;25 | |||
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| ||
|short_description=p1@CARD8 | |short_description=p1@CARD8 | ||
}} | }} |
Latest revision as of 01:38, 19 September 2015
Short description: | p1@CARD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CARD8_5end |
Coexpression cluster: | C560_Neutrophils_Eosinophils_CD14CD16_Whole_CD14_acute_Dendritic |
Association with transcript: | 0bp_to_ENST00000357778, ENST00000518596, ENST00000519302, ENST00000519646, ENST00000520015, ENST00000520153, ENST00000521092, ENST00000522051, ENST00000522773_5end |
EntrezGene: | CARD8 |
HGNC: | 17057 |
UniProt: | B7Z7N9E5RHJ3E5RHZ3G3XAM9E5RIN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.37e-41 | 108 |
hematopoietic system | 5.00e-38 | 98 |
blood island | 5.00e-38 | 98 |
immune system | 1.07e-35 | 93 |
bone marrow | 3.48e-30 | 76 |
bone element | 1.76e-26 | 82 |
lateral plate mesoderm | 1.57e-23 | 203 |
adult organism | 4.09e-23 | 114 |
skeletal element | 2.08e-21 | 90 |
skeletal system | 7.00e-17 | 100 |
blood vessel endothelium | 9.63e-14 | 18 |
endothelium | 9.63e-14 | 18 |
cardiovascular system endothelium | 9.63e-14 | 18 |
simple squamous epithelium | 1.31e-09 | 22 |
endothelial tube | 1.72e-07 | 9 |
arterial system endothelium | 1.72e-07 | 9 |
endothelium of artery | 1.72e-07 | 9 |
squamous epithelium | 1.77e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.54e-10 | 31 |
leukemia | 1.20e-09 | 39 |
hematologic cancer | 4.02e-09 | 51 |
immune system cancer | 4.02e-09 | 51 |