FFCP PHASE1:Hg19::chr22:18484230..18484248,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57553 | |EntrezGene=57553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24694 | |HGNC=24694 | ||
|TSSclassifier=strong | |||
|UniProt=E9PP85 | |UniProt=E9PP85 | ||
|association_with_transcript=18bp_to_ENST00000495076,uc002znl.1_5end | |association_with_transcript=18bp_to_ENST00000495076,uc002znl.1_5end | ||
|cluster_id=chr22:18484230..18484248,- | |||
|description=CAGE_peak_3_at_MICAL3_5end | |description=CAGE_peak_3_at_MICAL3_5end | ||
|id=chr22:18484230..18484248,- | |id=chr22:18484230..18484248,- | ||
|ontology_enrichment_celltype=CL:0000945!8.12e-09!24;CL:0000826!8.12e-09!24;CL:0000236!3.86e-08!14 | |ontology_enrichment_celltype=CL:0000945!8.12e-09!24;CL:0000826!8.12e-09!24;CL:0000236!3.86e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.53e-09;24!CL:0000236;1.65e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.74e-09,24;CL:0000826,6.74e-09,24;CL:0000236,3.26e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-19!115;UBERON:0001049!1.74e-12!57;UBERON:0005068!1.74e-12!57;UBERON:0006241!1.74e-12!57;UBERON:0007135!1.74e-12!57;UBERON:0003075!3.21e-11!86;UBERON:0007284!3.21e-11!86;UBERON:0002616!1.02e-09!59;UBERON:0002346!1.44e-09!90;UBERON:0004121!1.60e-09!169;UBERON:0000064!5.01e-09!219;UBERON:0000955!8.28e-09!69;UBERON:0006238!8.28e-09!69;UBERON:0000924!1.74e-08!173;UBERON:0006601!1.74e-08!173;UBERON:0004111!2.05e-08!241;UBERON:0000033!2.56e-08!123;UBERON:0005743!6.83e-08!86;UBERON:0002780!8.11e-08!41;UBERON:0001890!8.11e-08!41;UBERON:0006240!8.11e-08!41;UBERON:0003080!1.06e-07!42;UBERON:0000073!1.32e-07!94;UBERON:0001016!1.32e-07!94;UBERON:0001017!1.64e-07!82;UBERON:0000153!1.94e-07!129;UBERON:0007811!1.94e-07!129;UBERON:0000025!2.29e-07!194;UBERON:0003056!2.37e-07!61;UBERON:0001893!2.68e-07!34;UBERON:0002020!4.98e-07!34;UBERON:0003528!4.98e-07!34;UBERON:0002791!5.51e-07!33;UBERON:0000477!5.66e-07!286 | |ontology_enrichment_uberon=UBERON:0007023!1.44e-19!115;UBERON:0001049!1.74e-12!57;UBERON:0005068!1.74e-12!57;UBERON:0006241!1.74e-12!57;UBERON:0007135!1.74e-12!57;UBERON:0003075!3.21e-11!86;UBERON:0007284!3.21e-11!86;UBERON:0002616!1.02e-09!59;UBERON:0002346!1.44e-09!90;UBERON:0004121!1.60e-09!169;UBERON:0000064!5.01e-09!219;UBERON:0000955!8.28e-09!69;UBERON:0006238!8.28e-09!69;UBERON:0000924!1.74e-08!173;UBERON:0006601!1.74e-08!173;UBERON:0004111!2.05e-08!241;UBERON:0000033!2.56e-08!123;UBERON:0005743!6.83e-08!86;UBERON:0002780!8.11e-08!41;UBERON:0001890!8.11e-08!41;UBERON:0006240!8.11e-08!41;UBERON:0003080!1.06e-07!42;UBERON:0000073!1.32e-07!94;UBERON:0001016!1.32e-07!94;UBERON:0001017!1.64e-07!82;UBERON:0000153!1.94e-07!129;UBERON:0007811!1.94e-07!129;UBERON:0000025!2.29e-07!194;UBERON:0003056!2.37e-07!61;UBERON:0001893!2.68e-07!34;UBERON:0002020!4.98e-07!34;UBERON:0003528!4.98e-07!34;UBERON:0002791!5.51e-07!33;UBERON:0000477!5.66e-07!286 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.55e-19,114;UBERON:0010371,4.53e-13,104;UBERON:0001049,1.65e-12,56;UBERON:0005068,1.65e-12,56;UBERON:0006241,1.65e-12,56;UBERON:0007135,1.65e-12,56;UBERON:0003075,3.06e-12,82;UBERON:0007284,3.06e-12,82;UBERON:0000073,1.20e-11,53;UBERON:0002616,1.20e-11,53;UBERON:0002346,2.78e-10,86;UBERON:0010314,1.53e-09,132;UBERON:0000955,1.02e-08,68;UBERON:0006238,1.02e-08,68;UBERON:0004121,1.78e-08,171;UBERON:0000924,1.78e-08,171;UBERON:0006601,1.78e-08,171;UBERON:0004111,3.42e-08,240;UBERON:0002780,1.15e-07,41;UBERON:0001890,1.15e-07,41;UBERON:0003080,1.15e-07,41;UBERON:0006240,1.15e-07,41;UBERON:0003056,1.19e-07,61;UBERON:0001017,2.43e-07,81;UBERON:0000025,3.52e-07,192;UBERON:0001893,3.55e-07,34;UBERON:0001016,3.94e-07,89;UBERON:0003528,6.59e-07,34;UBERON:0002020,6.59e-07,34 | |||
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| ||
|short_description=p3@MICAL3 | |short_description=p3@MICAL3 | ||
}} | }} |
Latest revision as of 01:54, 19 September 2015
Short description: | p3@MICAL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MICAL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000495076, uc002znl.1_5end |
EntrezGene: | MICAL3 |
HGNC: | 24694 |
UniProt: | E9PP85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.74e-09 | 24 |
pro-B cell | 6.74e-09 | 24 |
B cell | 3.26e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.55e-19 | 114 |
ecto-epithelium | 4.53e-13 | 104 |
neural tube | 1.65e-12 | 56 |
neural rod | 1.65e-12 | 56 |
future spinal cord | 1.65e-12 | 56 |
neural keel | 1.65e-12 | 56 |
neural plate | 3.06e-12 | 82 |
presumptive neural plate | 3.06e-12 | 82 |
regional part of nervous system | 1.20e-11 | 53 |
regional part of brain | 1.20e-11 | 53 |
neurectoderm | 2.78e-10 | 86 |
structure with developmental contribution from neural crest | 1.53e-09 | 132 |
brain | 1.02e-08 | 68 |
future brain | 1.02e-08 | 68 |
ectoderm-derived structure | 1.78e-08 | 171 |
ectoderm | 1.78e-08 | 171 |
presumptive ectoderm | 1.78e-08 | 171 |
anatomical conduit | 3.42e-08 | 240 |
regional part of forebrain | 1.15e-07 | 41 |
forebrain | 1.15e-07 | 41 |
anterior neural tube | 1.15e-07 | 41 |
future forebrain | 1.15e-07 | 41 |
pre-chordal neural plate | 1.19e-07 | 61 |
central nervous system | 2.43e-07 | 81 |
tube | 3.52e-07 | 192 |
telencephalon | 3.55e-07 | 34 |
nervous system | 3.94e-07 | 89 |
brain grey matter | 6.59e-07 | 34 |
gray matter | 6.59e-07 | 34 |