FFCP PHASE1:Hg19::chr6:46620576..46620585,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:46620576..46620585,-
|short_description=p5@CYP39A1
|description=CAGE_peak_5_at_CYP39A1_5end
|association_with_transcript=-53bp_to_ENST00000275016,NM_016593...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51302 | |EntrezGene=51302 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17449 | |HGNC=17449 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYL5 | |UniProt=Q9NYL5 | ||
|association_with_transcript=-53bp_to_ENST00000275016,NM_016593,uc003oyf.1,uc010jzd.1,uc011dwa.1_5end | |||
|cluster_id=chr6:46620576..46620585,- | |||
|description=CAGE_peak_5_at_CYP39A1_5end | |||
|id=chr6:46620576..46620585,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.27e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.15e-07,24;CL:0000826,1.15e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.48e-40;1!UBERON:0003056;1.60e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.50e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.90e-17,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.73e-24!115;UBERON:0002616!6.91e-19!59;UBERON:0001049!7.40e-19!57;UBERON:0005068!7.40e-19!57;UBERON:0006241!7.40e-19!57;UBERON:0007135!7.40e-19!57;UBERON:0000153!9.11e-19!129;UBERON:0007811!9.11e-19!129;UBERON:0000033!8.40e-18!123;UBERON:0001017!2.38e-17!82;UBERON:0005743!4.16e-17!86;UBERON:0000955!4.47e-17!69;UBERON:0006238!4.47e-17!69;UBERON:0002780!2.55e-16!41;UBERON:0001890!2.55e-16!41;UBERON:0006240!2.55e-16!41;UBERON:0003080!9.89e-16!42;UBERON:0000073!2.60e-15!94;UBERON:0001016!2.60e-15!94;UBERON:0003075!7.04e-15!86;UBERON:0007284!7.04e-15!86;UBERON:0002346!1.18e-13!90;UBERON:0002020!4.07e-13!34;UBERON:0003528!4.07e-13!34;UBERON:0004121!6.81e-13!169;UBERON:0001893!7.78e-13!34;UBERON:0000924!3.40e-12!173;UBERON:0006601!3.40e-12!173;UBERON:0002791!4.04e-12!33;UBERON:0003056!4.98e-12!61;UBERON:0001869!4.53e-11!32;UBERON:0000481!8.24e-10!347;UBERON:0002619!4.82e-09!22;UBERON:0000062!5.32e-09!511;UBERON:0000956!1.05e-08!25;UBERON:0000203!1.05e-08!25;UBERON:0001950!1.23e-08!20;UBERON:0000477!9.63e-08!286;UBERON:0002298!1.07e-07!8;UBERON:0000475!1.90e-07!365;UBERON:0001871!2.76e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.48e-40;1!UBERON:0001785;1.48e-40;1!UBERON:0002464;1.48e-40;1!UBERON:0004904;1.48e-40;1!UBERON:0001021;1.48e-40;1!UBERON:0003714;4.66e-21;2!UBERON:0005162;4.66e-21;2!UBERON:0000122;4.66e-21;2!UBERON:0002114;1.60e-14;2!UBERON:0002108;2.97e-09;4!UBERON:0001871;5.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.48e-40,1;UBERON:0001785,1.48e-40,1;UBERON:0002464,1.48e-40,1;UBERON:0004904,1.48e-40,1;UBERON:0001021,1.48e-40,1;UBERON:0003902,1.48e-40,1;UBERON:0005425,1.48e-40,1;UBERON:0003714,4.66e-21,2;UBERON:0005162,4.66e-21,2;UBERON:0000122,4.66e-21,2;UBERON:0002114,2.09e-14,2;UBERON:0001781,3.10e-11,4;UBERON:0002108,3.49e-09,4;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0001871,6.04e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,1.62681121218633,1.56386155736164,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0.317489471460845,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.34444334449382,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.27470839445503,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0,0,0,0.307801034015188,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.530745387020035,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0.30607276163049,0.252746318513952,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0,0,0.316553979779393,0,0.240476460754601,0.426905989478705,0,0.288180834308212,0,0,0,0.372757606696298,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.517131825446202,0.39669780522807,0.171086837884329,0.704815022316672,0.320362237703084,0.314408610199332,0,0,0,0.852548188666271,0,0.544017803369474,0,0,0,0.314108192500469,0,0.122026264901963,0.3755727921195,0.573409195690071,0.554645257684261,0.18628920882415,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.798169295285756,0,0.252071696221718,0.207471757392654,0.161475645631851,1.42769420259154,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0.135939465953663,0,0.118193840883968,0,0.78493092850514,0,0,0,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0.594092800654172,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.430018749454354,0,0.135982980381829,0.872701380680755,1.0580536810308,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.620597975171371,0.213233981900981,0.476128862927481,0,0.124149428591716,0,0.25458863311266,0.202117188958219,0,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0.106727345877715,0,0,0,0.366724332548599,0.813792356631477,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,1.62681121218633,1.56386155736164,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0.317489471460845,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.34444334449382,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.27470839445503,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0,0,0,0.307801034015188,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.530745387020035,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0.30607276163049,0.252746318513952,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0,0,0.316553979779393,0,0.240476460754601,0.426905989478705,0,0.288180834308212,0,0,0,0.372757606696298,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.517131825446202,0.39669780522807,0.171086837884329,0.704815022316672,0.320362237703084,0.314408610199332,0,0,0,0.852548188666271,0,0.544017803369474,0,0,0,0.314108192500469,0,0.122026264901963,0.3755727921195,0.573409195690071,0.554645257684261,0.18628920882415,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.798169295285756,0,0.252071696221718,0.207471757392654,0.161475645631851,1.42769420259154,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0.135939465953663,0,0.118193840883968,0,0.78493092850514,0,0,0,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0.594092800654172,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.430018749454354,0,0.135982980381829,0.872701380680755,1.0580536810308,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.620597975171371,0.213233981900981,0.476128862927481,0,0.124149428591716,0,0.25458863311266,0.202117188958219,0,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0.106727345877715,0,0,0,0.366724332548599,0.813792356631477,0,0,0 | ||
|short_description=p5@CYP39A1 | |||
}} | }} |
Latest revision as of 03:04, 19 September 2015
Short description: | p5@CYP39A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYP39A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_ENST00000275016, NM_016593, uc003oyf.1, uc010jzd.1, uc011dwa.1_5end |
EntrezGene: | CYP39A1 |
HGNC: | 17449 |
UniProt: | Q9NYL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.15e-07 | 24 |
pro-B cell | 1.15e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.48e-40 | 1 |
cranial nerve | 1.48e-40 | 1 |
nerve trunk | 1.48e-40 | 1 |
nerve connecting eye with brain | 1.48e-40 | 1 |
nerve | 1.48e-40 | 1 |
retinal neural layer | 1.48e-40 | 1 |
presumptive neural retina | 1.48e-40 | 1 |
neural tissue | 4.66e-21 | 2 |
multi cell component structure | 4.66e-21 | 2 |
neuron projection bundle | 4.66e-21 | 2 |
duodenum | 2.09e-14 | 2 |
layer of retina | 3.10e-11 | 4 |
small intestine | 3.49e-09 | 4 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
temporal lobe | 6.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.90e-17 | 10 |