FFCP PHASE1:Hg19::chr22:19929336..19929371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000467943_5end | |association_with_transcript=20bp_to_ENST00000467943_5end | ||
|cluster_id=chr22:19929336..19929371,+ | |||
|coexpression_cluster_id=C4089 | |||
|description=CAGE_peak_4_at_COMT_5end | |description=CAGE_peak_4_at_COMT_5end | ||
|id=chr22:19929336..19929371,+ | |id=chr22:19929336..19929371,+ | ||
|ontology_enrichment_celltype=CL:0002371!5.51e-15!591;CL:0000144!1.30e-13!625;CL:0000055!1.45e-12!180;CL:0000222!2.00e-11!119;CL:0000183!2.06e-09!59;CL:0000192!2.13e-09!42;CL:0000514!2.13e-09!42;CL:0000359!5.24e-09!32;CL:0000680!1.90e-08!57;CL:0000056!1.90e-08!57;CL:0000355!1.90e-08!57;CL:0000012!3.64e-08!682;CL:0000548!1.08e-07!679;CL:0000004!1.08e-07!679;CL:0000255!1.08e-07!679;CL:0000187!1.64e-07!54;CL:0000048!2.22e-07!430;CL:0000220!2.47e-07!246;CL:0000723!3.27e-07!436;CL:0002321!9.58e-07!248 | |ontology_enrichment_celltype=CL:0002371!5.51e-15!591;CL:0000144!1.30e-13!625;CL:0000055!1.45e-12!180;CL:0000222!2.00e-11!119;CL:0000183!2.06e-09!59;CL:0000192!2.13e-09!42;CL:0000514!2.13e-09!42;CL:0000359!5.24e-09!32;CL:0000680!1.90e-08!57;CL:0000056!1.90e-08!57;CL:0000355!1.90e-08!57;CL:0000012!3.64e-08!682;CL:0000548!1.08e-07!679;CL:0000004!1.08e-07!679;CL:0000255!1.08e-07!679;CL:0000187!1.64e-07!54;CL:0000048!2.22e-07!430;CL:0000220!2.47e-07!246;CL:0000723!3.27e-07!436;CL:0002321!9.58e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.14e-08;55!CL:0000359;2.67e-08;32!CL:0000048;8.96e-08;58!CL:0000723;3.65e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.31e-11,121;CL:0000192,2.52e-09,43;CL:0000514,2.52e-09,43;CL:0000359,5.24e-09,32;CL:0000680,2.02e-08,58;CL:0000056,2.02e-08,58;CL:0000355,2.02e-08,58;CL:0000048,8.23e-08,427;CL:0000723,1.23e-07,433;CL:0000187,1.72e-07,55;CL:0002321,6.54e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.00e-10!79;UBERON:0007798!9.00e-10!79;UBERON:0000914!1.00e-08!83;UBERON:0002329!1.00e-08!83;UBERON:0003077!1.00e-08!83;UBERON:0003059!1.00e-08!83;UBERON:0007282!1.00e-08!83;UBERON:0009618!1.00e-08!83;UBERON:0007285!1.00e-08!83;UBERON:0000486!3.97e-08!82;UBERON:0004290!5.48e-08!70;UBERON:0000055!1.56e-07!69;UBERON:0001134!1.97e-07!61;UBERON:0002036!1.97e-07!61;UBERON:0003082!1.97e-07!61;UBERON:0004872!3.94e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.04e-10,78;UBERON:0002049,1.57e-09,78;UBERON:0007798,1.57e-09,78;UBERON:0007524,2.11e-08,73;UBERON:0000486,3.99e-08,83;UBERON:0003077,4.16e-08,72;UBERON:0007285,4.16e-08,72;UBERON:0002329,5.61e-08,71;UBERON:0003059,5.61e-08,71;UBERON:0007282,5.61e-08,71;UBERON:0004290,5.61e-08,71;UBERON:0009618,5.61e-08,71;UBERON:0001134,2.04e-07,62;UBERON:0002036,2.04e-07,62;UBERON:0003082,2.04e-07,62;UBERON:0000055,2.63e-07,68;UBERON:0004872,6.41e-07,83 | |||
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| ||
|short_description=p4@COMT | |short_description=p4@COMT | ||
}} | }} |
Latest revision as of 03:55, 19 September 2015
Short description: | p4@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COMT_5end |
Coexpression cluster: | C4089_Renal_Mesenchymal_Fibroblast_Pericytes_acute_Preadipocyte_Urothelial |
Association with transcript: | 20bp_to_ENST00000467943_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.31e-11 | 121 |
smooth muscle cell | 2.52e-09 | 43 |
smooth muscle myoblast | 2.52e-09 | 43 |
vascular associated smooth muscle cell | 5.24e-09 | 32 |
muscle precursor cell | 2.02e-08 | 58 |
myoblast | 2.02e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.02e-08 | 58 |
multi fate stem cell | 8.23e-08 | 427 |
somatic stem cell | 1.23e-07 | 433 |
muscle cell | 1.72e-07 | 55 |
embryonic cell | 6.54e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.04e-10 | 78 |
vasculature | 1.57e-09 | 78 |
vascular system | 1.57e-09 | 78 |
dense mesenchyme tissue | 2.11e-08 | 73 |
multilaminar epithelium | 3.99e-08 | 83 |
paraxial mesoderm | 4.16e-08 | 72 |
presumptive paraxial mesoderm | 4.16e-08 | 72 |
somite | 5.61e-08 | 71 |
presomitic mesoderm | 5.61e-08 | 71 |
presumptive segmental plate | 5.61e-08 | 71 |
dermomyotome | 5.61e-08 | 71 |
trunk paraxial mesoderm | 5.61e-08 | 71 |
skeletal muscle tissue | 2.04e-07 | 62 |
striated muscle tissue | 2.04e-07 | 62 |
myotome | 2.04e-07 | 62 |
vessel | 2.63e-07 | 68 |
splanchnic layer of lateral plate mesoderm | 6.41e-07 | 83 |