FFCP PHASE1:Hg19::chr22:19938419..19938432,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:19938419..19938432,+
|short_description=p26@COMT
|description=CAGE_peak_26_at_COMT_5end
|association_with_transcript=-27bp_to_NM_001135161,uc011ahd.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt=P21964 | |UniProt=P21964 | ||
|association_with_transcript=-27bp_to_NM_001135161,uc011ahd.1_5end | |||
|cluster_id=chr22:19938419..19938432,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_26_at_COMT_5end | |||
|id=chr22:19938419..19938432,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.02e-34!10;CL:0000541!1.02e-34!10;CL:0000147!1.41e-24!14;CL:0002567!1.72e-22!3;CL:0000710!5.87e-17!20;CL:0000075!2.44e-12!27;CL:0000325!1.11e-10!39;CL:0002077!6.16e-10!33;CL:0002566!1.63e-08!1;CL:0000333!2.02e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.70e-96;10!CL:0000147;5.57e-69;14!CL:0002567;3.30e-60;3!CL:0000710;2.55e-48;20!CL:0000075;8.37e-36;27!CL:0002077;4.62e-25;34!CL:0002566;6.31e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.96e-96,10;CL:0000541,1.96e-96,10;CL:0000147,6.16e-69,14;CL:0002567,3.65e-60,3;CL:0000710,2.73e-48,20;CL:0000075,8.82e-36,27;CL:0002077,2.07e-28,34;CL:0000333,1.89e-22,41;CL:0002566,6.31e-21,1;CL:0000133,8.75e-16,59;CL:0000221,5.62e-13,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.02e-08;59!UBERON:0003056;8.02e-08;3!CL:0000221;2.39e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001896!6.21e-21!3;UBERON:0005290!6.21e-21!3;UBERON:0010096!6.21e-21!3;UBERON:0002298!7.39e-21!8;UBERON:0003076!1.05e-15!15;UBERON:0003057!1.05e-15!15;UBERON:0007023!2.25e-10!115;UBERON:0002240!5.18e-10!3;UBERON:0001049!5.89e-10!57;UBERON:0005068!5.89e-10!57;UBERON:0006241!5.89e-10!57;UBERON:0007135!5.89e-10!57;UBERON:0004733!3.57e-09!12;UBERON:0002028!3.57e-09!12;UBERON:0007277!3.57e-09!12;UBERON:0004732!1.77e-08!13;UBERON:0000989!2.50e-08!1;UBERON:0008811!2.50e-08!1;UBERON:0006258!2.50e-08!1;UBERON:0005876!2.50e-08!1;UBERON:0004874!2.50e-08!1;UBERON:0002038!4.72e-08!1;UBERON:0009661!4.72e-08!1;UBERON:0002902!5.07e-08!1;UBERON:0009899!5.07e-08!1;UBERON:0003075!1.71e-07!86;UBERON:0007284!1.71e-07!86;UBERON:0005743!2.18e-07!86;UBERON:0002346!4.40e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p26@COMT | |||
}} | }} |
Latest revision as of 04:02, 19 September 2015
Short description: | p26@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_COMT_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -27bp_to_NM_001135161, uc011ahd.1_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.96e-96 | 10 |
melanoblast | 1.96e-96 | 10 |
pigment cell | 6.16e-69 | 14 |
light melanocyte | 3.65e-60 | 3 |
neurecto-epithelial cell | 2.73e-48 | 20 |
columnar/cuboidal epithelial cell | 8.82e-36 | 27 |
ecto-epithelial cell | 2.07e-28 | 34 |
migratory neural crest cell | 1.89e-22 | 41 |
dark melanocyte | 6.31e-21 | 1 |
neurectodermal cell | 8.75e-16 | 59 |
ectodermal cell | 5.62e-13 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.73e-11 | 2 |