FFCP PHASE1:Hg19::chr5:892954..893050,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:892954..893050,+
|short_description=p1@TRIP13
|description=CAGE_peak_1_at_TRIP13_5end
|association_with_transcript=0bp_to_ENST00000354240,ENST00000512024,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9319 | |EntrezGene=9319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12307 | |HGNC=12307 | ||
|TSSclassifier=strong | |||
|UniProt=Q15645 | |UniProt=Q15645 | ||
|association_with_transcript=0bp_to_ENST00000354240,ENST00000512024,NM_001166260,NM_004237,uc003jbr.2,uc010ite.1_5end | |||
|cluster_id=chr5:892954..893050,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_TRIP13_5end | |||
|id=chr5:892954..893050,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.57e-25!254;CL:0000548!4.48e-23!679;CL:0000004!4.48e-23!679;CL:0000255!4.48e-23!679;CL:0000012!1.29e-22!682;CL:0002321!5.83e-16!248;CL:0000220!1.74e-15!246;CL:0000003!1.07e-11!722;CL:0000076!3.45e-10!62;CL:0000055!3.65e-10!180;CL:0000063!1.14e-08!578;CL:0000144!1.40e-08!625;CL:0000222!9.86e-08!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.86e-25,253;CL:0002321,7.18e-16,250;CL:0000076,6.11e-10,63;CL:0000222,7.97e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.88e-44!235;DOID:14566!1.56e-43!239;DOID:0050687!3.12e-24!143;DOID:305!3.11e-19!106;DOID:0050686!6.35e-19!137;DOID:2531!8.43e-12!51;DOID:0060083!8.43e-12!51;DOID:1240!7.12e-10!39;DOID:8692!3.99e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.95e-08;39!DOID:8692;6.28e-08;31!DOID:2531;8.32e-08;51!DOID:0060083;8.32e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.73e-44,235;DOID:14566,9.49e-44,239;DOID:0050687,1.93e-24,143;DOID:305,2.14e-19,106;DOID:0050686,6.00e-19,137;DOID:2531,6.80e-12,51;DOID:0060083,6.80e-12,51;DOID:1240,5.98e-10,39;DOID:8692,3.47e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!6.77e-09!238;UBERON:0009142!6.77e-09!238;UBERON:0001737!1.67e-07!9;UBERON:0000072!6.61e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.46e-07;9!UBERON:0001557;1.46e-07;9!UBERON:0000072;9.06e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.47e-07,9 | |||
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| ||
|short_description=p1@TRIP13 | |||
}} | }} |
Latest revision as of 04:17, 19 September 2015
Short description: | p1@TRIP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIP13_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000354240, ENST00000512024, NM_001166260, NM_004237, uc003jbr.2, uc010ite.1_5end |
EntrezGene: | TRIP13 |
HGNC: | 12307 |
UniProt: | Q15645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.86e-25 | 253 |
embryonic cell | 7.18e-16 | 250 |
squamous epithelial cell | 6.11e-10 | 63 |
mesodermal cell | 7.97e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.73e-44 | 235 |
disease of cellular proliferation | 9.49e-44 | 239 |
cell type cancer | 1.93e-24 | 143 |
carcinoma | 2.14e-19 | 106 |
organ system cancer | 6.00e-19 | 137 |
hematologic cancer | 6.80e-12 | 51 |
immune system cancer | 6.80e-12 | 51 |
leukemia | 5.98e-10 | 39 |
myeloid leukemia | 3.47e-08 | 31 |