FFCP PHASE1:Hg19::chr2:192110176..192110195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4430 | |EntrezGene=4430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7596 | |HGNC=7596 | ||
|TSSclassifier=strong | |||
|UniProt=O43795,B0I1S9 | |UniProt=O43795,B0I1S9 | ||
|association_with_transcript=-58bp_to_ENST00000304164,NM_001161819,uc002usr.2_5end | |association_with_transcript=-58bp_to_ENST00000304164,NM_001161819,uc002usr.2_5end | ||
|cluster_id=chr2:192110176..192110195,+ | |||
|coexpression_cluster_id=C4162 | |coexpression_cluster_id=C4162 | ||
|description=CAGE_peak_2_at_MYO1B_5end | |description=CAGE_peak_2_at_MYO1B_5end | ||
|id=chr2:192110176..192110195,+ | |id=chr2:192110176..192110195,+ | ||
|ontology_enrichment_celltype=CL:0000220!8.67e-25!246;CL:0002321!1.49e-24!248;CL:0000055!8.26e-22!180;CL:0000066!2.76e-16!254;CL:0000057!7.25e-16!75;CL:0000223!2.21e-11!59;CL:0002076!1.30e-10!43;CL:0002620!5.89e-09!23;CL:0000680!6.78e-08!57;CL:0000056!6.78e-08!57;CL:0000355!6.78e-08!57;CL:0002077!1.72e-07!33;CL:0000187!3.12e-07!54;CL:0000221!4.12e-07!71 | |ontology_enrichment_celltype=CL:0000220!8.67e-25!246;CL:0002321!1.49e-24!248;CL:0000055!8.26e-22!180;CL:0000066!2.76e-16!254;CL:0000057!7.25e-16!75;CL:0000223!2.21e-11!59;CL:0002076!1.30e-10!43;CL:0002620!5.89e-09!23;CL:0000680!6.78e-08!57;CL:0000056!6.78e-08!57;CL:0000355!6.78e-08!57;CL:0002077!1.72e-07!33;CL:0000187!3.12e-07!54;CL:0000221!4.12e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.60e-09;23!CL:0002076;2.68e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.35e-24,250;CL:0000057,4.81e-16,76;CL:0000066,6.95e-16,253;CL:0000223,1.72e-11,58;CL:0002076,1.51e-10,42;CL:0002620,4.76e-09,23;CL:0002077,1.23e-07,34;CL:0000680,1.44e-07,58;CL:0000056,1.44e-07,58;CL:0000355,1.44e-07,58;CL:0000221,3.16e-07,72;CL:0000187,6.53e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.36e-19!95;UBERON:0000475!2.08e-18!365;UBERON:0002100!2.19e-14!216;UBERON:0002097!8.35e-14!40;UBERON:0002199!1.06e-13!45;UBERON:0002416!1.06e-13!45;UBERON:0000481!2.26e-12!347;UBERON:0000914!3.42e-12!83;UBERON:0002329!3.42e-12!83;UBERON:0003077!3.42e-12!83;UBERON:0003059!3.42e-12!83;UBERON:0007282!3.42e-12!83;UBERON:0009618!3.42e-12!83;UBERON:0007285!3.42e-12!83;UBERON:0003104!3.98e-12!238;UBERON:0009142!3.98e-12!238;UBERON:0005256!5.64e-12!143;UBERON:0000486!6.13e-12!82;UBERON:0000119!1.35e-11!312;UBERON:0000483!1.87e-11!309;UBERON:0000490!6.71e-11!138;UBERON:0000468!7.77e-11!659;UBERON:0004119!5.60e-10!169;UBERON:0000925!5.60e-10!169;UBERON:0006595!5.60e-10!169;UBERON:0000467!7.82e-10!625;UBERON:0004290!1.34e-09!70;UBERON:0000480!1.43e-09!626;UBERON:0001007!8.19e-09!155;UBERON:0001555!8.19e-09!155;UBERON:0007026!8.19e-09!155;UBERON:0000477!2.35e-08!286;UBERON:0001134!7.95e-08!61;UBERON:0002036!7.95e-08!61;UBERON:0003082!7.95e-08!61;UBERON:0002385!1.95e-07!63;UBERON:0001015!1.95e-07!63;UBERON:0000383!1.95e-07!63;UBERON:0002049!6.81e-07!79;UBERON:0007798!6.81e-07!79 | |ontology_enrichment_uberon=UBERON:0003102!1.36e-19!95;UBERON:0000475!2.08e-18!365;UBERON:0002100!2.19e-14!216;UBERON:0002097!8.35e-14!40;UBERON:0002199!1.06e-13!45;UBERON:0002416!1.06e-13!45;UBERON:0000481!2.26e-12!347;UBERON:0000914!3.42e-12!83;UBERON:0002329!3.42e-12!83;UBERON:0003077!3.42e-12!83;UBERON:0003059!3.42e-12!83;UBERON:0007282!3.42e-12!83;UBERON:0009618!3.42e-12!83;UBERON:0007285!3.42e-12!83;UBERON:0003104!3.98e-12!238;UBERON:0009142!3.98e-12!238;UBERON:0005256!5.64e-12!143;UBERON:0000486!6.13e-12!82;UBERON:0000119!1.35e-11!312;UBERON:0000483!1.87e-11!309;UBERON:0000490!6.71e-11!138;UBERON:0000468!7.77e-11!659;UBERON:0004119!5.60e-10!169;UBERON:0000925!5.60e-10!169;UBERON:0006595!5.60e-10!169;UBERON:0000467!7.82e-10!625;UBERON:0004290!1.34e-09!70;UBERON:0000480!1.43e-09!626;UBERON:0001007!8.19e-09!155;UBERON:0001555!8.19e-09!155;UBERON:0007026!8.19e-09!155;UBERON:0000477!2.35e-08!286;UBERON:0001134!7.95e-08!61;UBERON:0002036!7.95e-08!61;UBERON:0003082!7.95e-08!61;UBERON:0002385!1.95e-07!63;UBERON:0001015!1.95e-07!63;UBERON:0000383!1.95e-07!63;UBERON:0002049!6.81e-07!79;UBERON:0007798!6.81e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.33e-10;41!UBERON:0002199;1.07e-09;46!UBERON:0002416;1.07e-09;46!UBERON:0003102;3.10e-08;50!UBERON:0000344;1.46e-07;20!UBERON:0010371;3.37e-07;31!UBERON:0003729;9.15e-07;13 | |||
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|short_description=p2@MYO1B | |short_description=p2@MYO1B | ||
}} | }} |
Latest revision as of 04:25, 19 September 2015
Short description: | p2@MYO1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYO1B_5end |
Coexpression cluster: | C4162_Small_Gingival_bone_Mammary_epidermoid_nasal_oral |
Association with transcript: | -58bp_to_ENST00000304164, NM_001161819, uc002usr.2_5end |
EntrezGene: | MYO1B |
HGNC: | 7596 |
UniProt: | O43795B0I1S9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.35e-24 | 250 |
fibroblast | 4.81e-16 | 76 |
epithelial cell | 6.95e-16 | 253 |
endodermal cell | 1.72e-11 | 58 |
endo-epithelial cell | 1.51e-10 | 42 |
skin fibroblast | 4.76e-09 | 23 |
ecto-epithelial cell | 1.23e-07 | 34 |
muscle precursor cell | 1.44e-07 | 58 |
myoblast | 1.44e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-07 | 58 |
ectodermal cell | 3.16e-07 | 72 |
muscle cell | 6.53e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.07e-21 | 99 |
skin of body | 8.35e-14 | 41 |
integument | 1.00e-13 | 46 |
integumental system | 1.00e-13 | 46 |
unilaminar epithelium | 2.18e-12 | 148 |
trunk | 8.75e-12 | 199 |
multilaminar epithelium | 1.26e-11 | 83 |
endoderm-derived structure | 7.91e-11 | 160 |
endoderm | 7.91e-11 | 160 |
presumptive endoderm | 7.91e-11 | 160 |
cell layer | 1.20e-10 | 309 |
epithelium | 1.64e-10 | 306 |
trunk mesenchyme | 2.45e-10 | 122 |
digestive system | 1.04e-09 | 145 |
digestive tract | 1.04e-09 | 145 |
primitive gut | 1.04e-09 | 145 |
dense mesenchyme tissue | 2.71e-09 | 73 |
somite | 2.76e-09 | 71 |
presomitic mesoderm | 2.76e-09 | 71 |
presumptive segmental plate | 2.76e-09 | 71 |
dermomyotome | 2.76e-09 | 71 |
trunk paraxial mesoderm | 2.76e-09 | 71 |
paraxial mesoderm | 5.67e-09 | 72 |
presumptive paraxial mesoderm | 5.67e-09 | 72 |
mesenchyme | 1.54e-08 | 160 |
entire embryonic mesenchyme | 1.54e-08 | 160 |
epithelial vesicle | 1.49e-07 | 78 |
mucosa | 1.58e-07 | 20 |
skeletal muscle tissue | 1.62e-07 | 62 |
striated muscle tissue | 1.62e-07 | 62 |
myotome | 1.62e-07 | 62 |
muscle tissue | 3.82e-07 | 64 |
musculature | 3.82e-07 | 64 |
musculature of body | 3.82e-07 | 64 |
primordium | 5.75e-07 | 160 |
head | 8.48e-07 | 56 |
mouth mucosa | 8.85e-07 | 13 |