FFCP PHASE1:Hg19::chr22:20784252..20784260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91179 | |EntrezGene=91179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19869 | |HGNC=19869 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000494535_5end | |association_with_transcript=-39bp_to_ENST00000494535_5end | ||
|cluster_id=chr22:20784252..20784260,- | |||
|description=CAGE_peak_5_at_SCARF2_5end | |description=CAGE_peak_5_at_SCARF2_5end | ||
|id=chr22:20784252..20784260,- | |id=chr22:20784252..20784260,- | ||
|ontology_enrichment_celltype=CL:0000037!1.23e-07!172;CL:0000566!1.23e-07!172;CL:0000738!1.30e-07!140;CL:0002087!1.30e-07!119;CL:0002031!4.43e-07!124;CL:0000839!4.69e-07!70;CL:0002057!5.62e-07!42;CL:0002032!6.35e-07!165;CL:0000837!6.35e-07!165;CL:0000557!6.66e-07!71;CL:0000988!8.08e-07!182;CL:0000893!8.13e-07!2;CL:0002489!8.13e-07!2;CL:0000809!8.13e-07!2;CL:0000808!8.13e-07!2;CL:0000894!8.13e-07!2;CL:0000806!8.13e-07!2;CL:0000807!8.13e-07!2;CL:0000805!8.13e-07!2;CL:0002425!8.13e-07!2 | |ontology_enrichment_celltype=CL:0000037!1.23e-07!172;CL:0000566!1.23e-07!172;CL:0000738!1.30e-07!140;CL:0002087!1.30e-07!119;CL:0002031!4.43e-07!124;CL:0000839!4.69e-07!70;CL:0002057!5.62e-07!42;CL:0002032!6.35e-07!165;CL:0000837!6.35e-07!165;CL:0000557!6.66e-07!71;CL:0000988!8.08e-07!182;CL:0000893!8.13e-07!2;CL:0002489!8.13e-07!2;CL:0000809!8.13e-07!2;CL:0000808!8.13e-07!2;CL:0000894!8.13e-07!2;CL:0000806!8.13e-07!2;CL:0000807!8.13e-07!2;CL:0000805!8.13e-07!2;CL:0002425!8.13e-07!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.90e-08;29 | |ontology_enrichment_development_v019=UBERON:0008947;6.90e-08;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!7.58e-17!34;UBERON:0001869!5.66e-16!32;UBERON:0002619!1.56e-15!22;UBERON:0002791!2.73e-15!33;UBERON:0001950!1.07e-14!20;UBERON:0001049!6.70e-14!57;UBERON:0005068!6.70e-14!57;UBERON:0006241!6.70e-14!57;UBERON:0007135!6.70e-14!57;UBERON:0000956!2.16e-13!25;UBERON:0000203!2.16e-13!25;UBERON:0002780!2.51e-13!41;UBERON:0001890!2.51e-13!41;UBERON:0006240!2.51e-13!41;UBERON:0003080!6.43e-13!42;UBERON:0002020!7.16e-13!34;UBERON:0003528!7.16e-13!34;UBERON:0002616!1.02e-11!59;UBERON:0007023!4.36e-11!115;UBERON:0000200!2.10e-10!6;UBERON:0000955!2.18e-10!69;UBERON:0006238!2.18e-10!69;UBERON:0001017!4.42e-09!82;UBERON:0000153!6.66e-09!129;UBERON:0007811!6.66e-09!129;UBERON:0005743!1.96e-08!86;UBERON:0002771!4.30e-08!3;UBERON:0003056!9.83e-08!61;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0000073!3.47e-07!94;UBERON:0001016!3.47e-07!94;UBERON:0002346!4.79e-07!90;UBERON:0003127!5.96e-07!2;UBERON:0000974!8.48e-07!10;UBERON:0000341!9.09e-07!2 | |ontology_enrichment_uberon=UBERON:0001893!7.58e-17!34;UBERON:0001869!5.66e-16!32;UBERON:0002619!1.56e-15!22;UBERON:0002791!2.73e-15!33;UBERON:0001950!1.07e-14!20;UBERON:0001049!6.70e-14!57;UBERON:0005068!6.70e-14!57;UBERON:0006241!6.70e-14!57;UBERON:0007135!6.70e-14!57;UBERON:0000956!2.16e-13!25;UBERON:0000203!2.16e-13!25;UBERON:0002780!2.51e-13!41;UBERON:0001890!2.51e-13!41;UBERON:0006240!2.51e-13!41;UBERON:0003080!6.43e-13!42;UBERON:0002020!7.16e-13!34;UBERON:0003528!7.16e-13!34;UBERON:0002616!1.02e-11!59;UBERON:0007023!4.36e-11!115;UBERON:0000200!2.10e-10!6;UBERON:0000955!2.18e-10!69;UBERON:0006238!2.18e-10!69;UBERON:0001017!4.42e-09!82;UBERON:0000153!6.66e-09!129;UBERON:0007811!6.66e-09!129;UBERON:0005743!1.96e-08!86;UBERON:0002771!4.30e-08!3;UBERON:0003056!9.83e-08!61;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0000073!3.47e-07!94;UBERON:0001016!3.47e-07!94;UBERON:0002346!4.79e-07!90;UBERON:0003127!5.96e-07!2;UBERON:0000974!8.48e-07!10;UBERON:0000341!9.09e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.30e-26;2!UBERON:0003126;2.11e-08;7!UBERON:0001005;2.11e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0003127;6.30e-26;2!UBERON:0003126;2.11e-08;7!UBERON:0001005;2.11e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.14e-26,2;UBERON:0003126,2.18e-08,7;UBERON:0001005,2.18e-08,7;UBERON:0005178,6.95e-07,34;UBERON:0002224,6.95e-07,34 | |||
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| ||
|short_description=p5@SCARF2 | |short_description=p5@SCARF2 | ||
}} | }} |
Latest revision as of 04:50, 19 September 2015
Short description: | p5@SCARF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCARF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000494535_5end |
EntrezGene: | SCARF2 |
HGNC: | 19869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.14e-26 | 2 |
trachea | 2.18e-08 | 7 |
respiratory airway | 2.18e-08 | 7 |
thoracic cavity element | 6.95e-07 | 34 |
thoracic cavity | 6.95e-07 | 34 |