FFCP PHASE1:Hg19::chr12:54447219..54447237,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:54447219..54447237,+
|short_description=p6@HOXC4
|description=CAGE_peak_6_at_HOXC4_5end
|association_with_transcript=-423bp_to_ENST00000430889,NM_153633,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3221 | |EntrezGene=3221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5126 | |HGNC=5126 | ||
|TSSclassifier=strong | |||
|UniProt=P09017,Q86TF7 | |UniProt=P09017,Q86TF7 | ||
|association_with_transcript=-423bp_to_ENST00000430889,NM_153633,uc001sex.2_5end | |||
|cluster_id=chr12:54447219..54447237,+ | |||
|description=CAGE_peak_6_at_HOXC4_5end | |||
|id=chr12:54447219..54447237,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.31e-14!53;CL:0000051!2.31e-14!53;CL:0000838!6.39e-14!52;CL:0000945!9.97e-12!24;CL:0000826!9.97e-12!24;CL:0000236!7.17e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.01e-20;24!CL:0000623;4.09e-14;3!CL:0000542;5.05e-12;53!CL:0000236;1.02e-11;13!CL:0002097;7.50e-10;2!CL:0000174;7.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.39e-23,52;CL:0000542,4.65e-23,53;CL:0000051,4.65e-23,53;CL:0000945,1.73e-20,24;CL:0000826,1.73e-20,24;CL:0000236,1.65e-14,14;CL:0000623,1.68e-14,3;CL:0000825,1.68e-14,3;CL:0002097,1.07e-09,2;CL:0002087,2.69e-08,115;CL:0002031,8.56e-08,120;CL:0000174,9.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;5.05e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;7.81e-07;3!UBERON:0001235;7.81e-07;3!UBERON:0006858;7.81e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.89e-07,3;UBERON:0001235,9.89e-07,3;UBERON:0006858,9.89e-07,3 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.845726424575827,0,0.893922188854576,0,0,0,0,0,0,0.436882744260345,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,5.50176521385249,4.35133124084712,4.72264687882075,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0.232401601740905,0.142169232487422,0.587200878669695,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,2.18455444504853,0,0.426730222566507,1.20118796110804,0.574752439954483,1.32208974556972,2.86216126360609,0,2.34894875748376,1.14681968437569,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.127986611154418,2.49861453104692,0,0.821127996921047,0.604820229674197,1.06976078313403,0.724122019413995,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,0.323745888736263,0.561803226808994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.460249493211497,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34337784054272,4.06887513919547,0,0,0,0,0.144119953416961,0.12624243342638,0.317489471460845,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0,1.45710687191585,2.36436912242313,1.94064817373566,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0.606255142892519,4.99306318531491,0.907170879989041,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0.328508624055237,1.03850885836724,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.541892875087706,1.00337954770971,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0.457847324091717,0.165018999841176,1.14853107599234,0,0,0.096670718292122,0.154048617114644,0.614014698904518,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.404364963146632,0,0,0.48763373908959,0.487426979262569,0,0,0,0,1.65409603063837,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.714695326373367,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,1.11598390910176,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06846023944879,0,0.868124974666461,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,2.65861549082874,3.30991955875499,2.19753042885058,0,0.853828638089378,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.586654148204409,0,0,0,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.906496732161005,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0.414239055347196,0,0.790446527591777,0.974340787047167,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.558867626472451,0.138348634936231,0,0,1.14186133417987,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0.899606224327209,0.310525913752519,0,0,0,0.450772826991655,2.28483127301277,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,2.31143796488764,1.07220795687463,2.3489486276869,0.680117776536817,1.389134845943,0.489473409012935,0.358177682162975,0.617602894321944,1.09642024789354,0.706756583783524,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,2.17420431216208,0,0,0.54604819096007,0,0,0.123935764259002,0.558644917973244,0,2.44471409503885,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.353909170043221,0,0.115525666150338,0,1.3807198521202,0.198916222116275,0.150420656698515,1.0085253435176,0,0,0,1.6264169483875,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,1.26757386311357,0,1.83518279037446,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0.473328002922261,0.170426809518315,0,0.22910686854405,0,0,0,0,0.487671699929078,0,0,0,0,0,0.198950775161368,0,0,0.769583617218004,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0,0.1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| |phase1_expression=0.181678379270557,0.856402095563933,0.845726424575827,0,0.893922188854576,0,0,0,0,0,0,0.436882744260345,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,5.50176521385249,4.35133124084712,4.72264687882075,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0.232401601740905,0.142169232487422,0.587200878669695,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,2.18455444504853,0,0.426730222566507,1.20118796110804,0.574752439954483,1.32208974556972,2.86216126360609,0,2.34894875748376,1.14681968437569,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.127986611154418,2.49861453104692,0,0.821127996921047,0.604820229674197,1.06976078313403,0.724122019413995,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,0.323745888736263,0.561803226808994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.460249493211497,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34337784054272,4.06887513919547,0,0,0,0,0.144119953416961,0.12624243342638,0.317489471460845,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0,1.45710687191585,2.36436912242313,1.94064817373566,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0.606255142892519,4.99306318531491,0.907170879989041,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0.328508624055237,1.03850885836724,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.541892875087706,1.00337954770971,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0.457847324091717,0.165018999841176,1.14853107599234,0,0,0.096670718292122,0.154048617114644,0.614014698904518,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.404364963146632,0,0,0.48763373908959,0.487426979262569,0,0,0,0,1.65409603063837,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.714695326373367,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,1.11598390910176,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06846023944879,0,0.868124974666461,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,2.65861549082874,3.30991955875499,2.19753042885058,0,0.853828638089378,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.586654148204409,0,0,0,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.906496732161005,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0.414239055347196,0,0.790446527591777,0.974340787047167,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.558867626472451,0.138348634936231,0,0,1.14186133417987,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0.899606224327209,0.310525913752519,0,0,0,0.450772826991655,2.28483127301277,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,2.31143796488764,1.07220795687463,2.3489486276869,0.680117776536817,1.389134845943,0.489473409012935,0.358177682162975,0.617602894321944,1.09642024789354,0.706756583783524,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,2.17420431216208,0,0,0.54604819096007,0,0,0.123935764259002,0.558644917973244,0,2.44471409503885,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.353909170043221,0,0.115525666150338,0,1.3807198521202,0.198916222116275,0.150420656698515,1.0085253435176,0,0,0,1.6264169483875,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,1.26757386311357,0,1.83518279037446,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0.473328002922261,0.170426809518315,0,0.22910686854405,0,0,0,0,0.487671699929078,0,0,0,0,0,0.198950775161368,0,0,0.769583617218004,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0,0.1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| ||
|short_description=p6@HOXC4 | |||
}} | }} |
Latest revision as of 05:10, 19 September 2015
Short description: | p6@HOXC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOXC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -423bp_to_ENST00000430889, NM_153633, uc001sex.2_5end |
EntrezGene: | HOXC4 |
HGNC: | 5126 |
UniProt: | P09017Q86TF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.39e-23 | 52 |
lymphocyte | 4.65e-23 | 53 |
common lymphoid progenitor | 4.65e-23 | 53 |
lymphocyte of B lineage | 1.73e-20 | 24 |
pro-B cell | 1.73e-20 | 24 |
B cell | 1.65e-14 | 14 |
natural killer cell | 1.68e-14 | 3 |
pro-NK cell | 1.68e-14 | 3 |
cortical cell of adrenal gland | 1.07e-09 | 2 |
nongranular leukocyte | 2.69e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.56e-08 | 120 |
steroid hormone secreting cell | 9.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 9.89e-07 | 3 |
adrenal cortex | 9.89e-07 | 3 |
adrenal/interrenal gland | 9.89e-07 | 3 |