FFCP PHASE1:Hg19::chr4:89079610..89079622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9429 | |EntrezGene=9429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=74 | |HGNC=74 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNQ0 | |UniProt=Q9UNQ0 | ||
|association_with_transcript=388bp_to_NM_004827,uc003hrg.2,uc003hrj.1_5end | |association_with_transcript=388bp_to_NM_004827,uc003hrg.2,uc003hrj.1_5end | ||
|cluster_id=chr4:89079610..89079622,- | |||
|description=CAGE_peak_6_at_ABCG2_5end | |description=CAGE_peak_6_at_ABCG2_5end | ||
|id=chr4:89079610..89079622,- | |id=chr4:89079610..89079622,- | ||
|ontology_enrichment_celltype=CL:0000039!7.04e-10!7;CL:0000586!7.04e-10!7 | |ontology_enrichment_celltype=CL:0000039!7.04e-10!7;CL:0000586!7.04e-10!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.65e-21;7!CL:0000586;6.65e-21;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.89e-21,7;CL:0000586,5.89e-21,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.94e-07;10!UBERON:0005564;9.94e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-30!115;UBERON:0001049!1.14e-24!57;UBERON:0005068!1.14e-24!57;UBERON:0006241!1.14e-24!57;UBERON:0007135!1.14e-24!57;UBERON:0001017!4.54e-24!82;UBERON:0005743!2.00e-23!86;UBERON:0000073!8.96e-21!94;UBERON:0001016!8.96e-21!94;UBERON:0002616!4.98e-19!59;UBERON:0000955!5.18e-19!69;UBERON:0006238!5.18e-19!69;UBERON:0002780!8.45e-18!41;UBERON:0001890!8.45e-18!41;UBERON:0006240!8.45e-18!41;UBERON:0003080!3.82e-17!42;UBERON:0002020!1.20e-16!34;UBERON:0003528!1.20e-16!34;UBERON:0001893!1.36e-16!34;UBERON:0002791!1.15e-15!33;UBERON:0001869!8.62e-15!32;UBERON:0003075!1.37e-14!86;UBERON:0007284!1.37e-14!86;UBERON:0002346!2.47e-13!90;UBERON:0002619!1.08e-12!22;UBERON:0001950!1.25e-12!20;UBERON:0000956!1.45e-10!25;UBERON:0000203!1.45e-10!25;UBERON:0003135!5.36e-10!11;UBERON:0003056!6.97e-10!61;UBERON:0000033!3.26e-09!123;UBERON:0003076!8.32e-09!15;UBERON:0003057!8.32e-09!15;UBERON:0000153!1.11e-08!129;UBERON:0007811!1.11e-08!129;UBERON:0003101!2.05e-08!22;UBERON:0000079!2.05e-08!22;UBERON:0002298!4.82e-08!8;UBERON:0002308!5.25e-08!9;UBERON:0000125!5.25e-08!9;UBERON:0004121!9.88e-08!169;UBERON:0000477!2.01e-07!286;UBERON:0000473!2.36e-07!8;UBERON:0004111!2.74e-07!241;UBERON:0000924!3.18e-07!173;UBERON:0006601!3.18e-07!173;UBERON:0000200!4.02e-07!6;UBERON:0004732!4.41e-07!13 | |ontology_enrichment_uberon=UBERON:0007023!1.55e-30!115;UBERON:0001049!1.14e-24!57;UBERON:0005068!1.14e-24!57;UBERON:0006241!1.14e-24!57;UBERON:0007135!1.14e-24!57;UBERON:0001017!4.54e-24!82;UBERON:0005743!2.00e-23!86;UBERON:0000073!8.96e-21!94;UBERON:0001016!8.96e-21!94;UBERON:0002616!4.98e-19!59;UBERON:0000955!5.18e-19!69;UBERON:0006238!5.18e-19!69;UBERON:0002780!8.45e-18!41;UBERON:0001890!8.45e-18!41;UBERON:0006240!8.45e-18!41;UBERON:0003080!3.82e-17!42;UBERON:0002020!1.20e-16!34;UBERON:0003528!1.20e-16!34;UBERON:0001893!1.36e-16!34;UBERON:0002791!1.15e-15!33;UBERON:0001869!8.62e-15!32;UBERON:0003075!1.37e-14!86;UBERON:0007284!1.37e-14!86;UBERON:0002346!2.47e-13!90;UBERON:0002619!1.08e-12!22;UBERON:0001950!1.25e-12!20;UBERON:0000956!1.45e-10!25;UBERON:0000203!1.45e-10!25;UBERON:0003135!5.36e-10!11;UBERON:0003056!6.97e-10!61;UBERON:0000033!3.26e-09!123;UBERON:0003076!8.32e-09!15;UBERON:0003057!8.32e-09!15;UBERON:0000153!1.11e-08!129;UBERON:0007811!1.11e-08!129;UBERON:0003101!2.05e-08!22;UBERON:0000079!2.05e-08!22;UBERON:0002298!4.82e-08!8;UBERON:0002308!5.25e-08!9;UBERON:0000125!5.25e-08!9;UBERON:0004121!9.88e-08!169;UBERON:0000477!2.01e-07!286;UBERON:0000473!2.36e-07!8;UBERON:0004111!2.74e-07!241;UBERON:0000924!3.18e-07!173;UBERON:0006601!3.18e-07!173;UBERON:0000200!4.02e-07!6;UBERON:0004732!4.41e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.28e-15;6!UBERON:0003135;8.03e-13;11!UBERON:0000473;1.15e-12;8!UBERON:0001896;1.56e-11;3!UBERON:0005290;1.56e-11;3!UBERON:0004732;7.72e-10;13!UBERON:0003101;5.62e-08;22!UBERON:0000079;5.62e-08;22!UBERON:0004733;1.17e-07;12!UBERON:0002028;1.17e-07;12!UBERON:0000073;4.82e-07;53!UBERON:0002616;4.82e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,3.48e-16,6;UBERON:0001017,4.87e-13,81;UBERON:0003135,8.01e-13,11;UBERON:0001016,1.13e-12,89;UBERON:0000473,1.15e-12,8;UBERON:0001896,3.50e-12,3;UBERON:0005290,3.50e-12,3;UBERON:0010096,3.50e-12,3;UBERON:0007023,1.18e-11,114;UBERON:0000955,2.58e-11,68;UBERON:0006238,2.58e-11,68;UBERON:0001049,4.69e-11,56;UBERON:0005068,4.69e-11,56;UBERON:0006241,4.69e-11,56;UBERON:0007135,4.69e-11,56;UBERON:0000073,3.23e-10,53;UBERON:0002616,3.23e-10,53;UBERON:0004732,3.59e-10,13;UBERON:0003075,9.48e-09,82;UBERON:0007284,9.48e-09,82;UBERON:0003076,1.11e-08,15;UBERON:0003057,1.11e-08,15;UBERON:0002346,3.53e-08,86;UBERON:0003101,5.55e-08,22;UBERON:0000079,5.55e-08,22;UBERON:0004733,6.33e-08,12;UBERON:0002028,6.33e-08,12;UBERON:0007277,6.33e-08,12 | |||
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| ||
|short_description=p6@ABCG2 | |short_description=p6@ABCG2 | ||
}} | }} |
Latest revision as of 07:02, 19 September 2015
Short description: | p6@ABCG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ABCG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 388bp_to_NM_004827, uc003hrg.2, uc003hrj.1_5end |
EntrezGene: | ABCG2 |
HGNC: | 74 |
UniProt: | Q9UNQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.89e-21 | 7 |
germ cell | 5.89e-21 | 7 |
Ontology term | p-value | n |
---|---|---|
brainstem | 3.48e-16 | 6 |
central nervous system | 4.87e-13 | 81 |
male reproductive organ | 8.01e-13 | 11 |
nervous system | 1.13e-12 | 89 |
testis | 1.15e-12 | 8 |
medulla oblongata | 3.50e-12 | 3 |
myelencephalon | 3.50e-12 | 3 |
future myelencephalon | 3.50e-12 | 3 |
adult organism | 1.18e-11 | 114 |
brain | 2.58e-11 | 68 |
future brain | 2.58e-11 | 68 |
neural tube | 4.69e-11 | 56 |
neural rod | 4.69e-11 | 56 |
future spinal cord | 4.69e-11 | 56 |
neural keel | 4.69e-11 | 56 |
regional part of nervous system | 3.23e-10 | 53 |
regional part of brain | 3.23e-10 | 53 |
segmental subdivision of nervous system | 3.59e-10 | 13 |
neural plate | 9.48e-09 | 82 |
presumptive neural plate | 9.48e-09 | 82 |
posterior neural tube | 1.11e-08 | 15 |
chordal neural plate | 1.11e-08 | 15 |
neurectoderm | 3.53e-08 | 86 |
male organism | 5.55e-08 | 22 |
male reproductive system | 5.55e-08 | 22 |
segmental subdivision of hindbrain | 6.33e-08 | 12 |
hindbrain | 6.33e-08 | 12 |
presumptive hindbrain | 6.33e-08 | 12 |