FFCP PHASE1:Hg19::chr12:55378452..55378458,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:55378452..55378458,-
|short_description=p8@KIAA0748
|description=CAGE_peak_8_at_KIAA0748_5end
|association_with_transcript=0bp_to_ENST00000449076,NM_00113...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9840 | |EntrezGene=9840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29109 | |HGNC=29109 | ||
|TSSclassifier=strong | |||
|UniProt=A2RU30 | |UniProt=A2RU30 | ||
|association_with_transcript=0bp_to_ENST00000449076,NM_001136030,uc001sgo.3,uc010spd.1_5end | |||
|cluster_id=chr12:55378452..55378458,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_8_at_KIAA0748_5end | |||
|id=chr12:55378452..55378458,- | |||
|ontology_enrichment_celltype=CL:0000084!1.99e-37!25;CL:0000827!1.99e-37!25;CL:0000791!2.36e-31!18;CL:0000789!2.36e-31!18;CL:0002420!2.36e-31!18;CL:0002419!2.36e-31!18;CL:0000790!2.36e-31!18;CL:0000838!2.98e-30!52;CL:0000542!1.61e-29!53;CL:0000051!1.61e-29!53;CL:0000988!1.12e-26!182;CL:0000037!4.24e-25!172;CL:0000566!4.24e-25!172;CL:0002032!1.00e-21!165;CL:0000837!1.00e-21!165;CL:0000625!1.59e-20!11;CL:0000738!3.62e-20!140;CL:0002031!1.02e-16!124;CL:0002087!3.05e-15!119;CL:0000624!1.16e-14!6;CL:0000080!1.50e-13!6;CL:0002274!2.21e-12!5;CL:0000457!2.21e-12!5;CL:0002191!2.21e-12!5;CL:0000097!2.21e-12!5;CL:0000831!2.21e-12!5;CL:0002028!2.21e-12!5;CL:0000898!4.16e-08!3;CL:0000842!2.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.45e-29;18!CL:0000789;2.45e-29;18!CL:0002419;2.45e-29;18!CL:0000084;8.42e-26;25!CL:0000624;1.21e-18;6!CL:0000625;2.38e-15;11!CL:0000898;4.72e-10;3!CL:0000542;3.95e-09;53!CL:0000895;3.69e-08;1!CL:0000097;8.56e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.14e-29,18;CL:0000789,3.14e-29,18;CL:0002420,3.14e-29,18;CL:0002419,3.14e-29,18;CL:0000790,3.14e-29,18;CL:0000084,1.02e-25,25;CL:0000827,1.02e-25,25;CL:0000624,1.37e-18,6;CL:0000625,2.75e-15,11;CL:0000838,1.66e-11,52;CL:0000542,2.95e-11,53;CL:0000051,2.95e-11,53;CL:0000898,7.13e-10,3;CL:0000810,6.24e-08,1;CL:0000895,6.24e-08,1;CL:0002436,6.24e-08,1;CL:0002427,6.24e-08,1;CL:0002428,6.24e-08,1;CL:0002429,6.24e-08,1;CL:0002433,6.24e-08,1;CL:0002431,6.24e-08,1;CL:0002432,6.24e-08,1;CL:0000738,3.38e-07,136;CL:0000097,8.58e-07,5;CL:0002028,8.58e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;2.45e-29;18!CL:0000051;3.95e-09;53!CL:0002427;3.69e-08;1 | |||
|ontology_enrichment_disease=DOID:2531!6.92e-10!51;DOID:0060083!6.92e-10!51;DOID:1240!3.72e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.57e-13!15;UBERON:0000179!1.57e-13!15;UBERON:0000463!1.57e-13!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.31e-15;2!UBERON:0005058;5.31e-15;2!UBERON:0009113;5.31e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.22e-16,4;UBERON:0005058,4.22e-16,4;UBERON:0009113,4.22e-16,4;UBERON:0003295,4.22e-16,4;UBERON:0005562,4.22e-16,4;UBERON:0003351,6.47e-11,6;UBERON:0004177,1.99e-09,7;UBERON:0005057,1.99e-09,7;UBERON:0000974,9.83e-07,10;UBERON:0003408,9.83e-07,10;UBERON:0001042,9.83e-07,10;UBERON:0009145,9.83e-07,10 | |||
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| ||
|short_description=p8@KIAA0748 | |||
}} | }} |
Latest revision as of 07:19, 19 September 2015
Short description: | p8@KIAA0748 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KIAA0748_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000449076, NM_001136030, uc001sgo.3, uc010spd.1_5end |
EntrezGene: | KIAA0748 |
HGNC: | 29109 |
UniProt: | A2RU30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.14e-29 | 18 |
alpha-beta T cell | 3.14e-29 | 18 |
immature T cell | 3.14e-29 | 18 |
mature T cell | 3.14e-29 | 18 |
immature alpha-beta T cell | 3.14e-29 | 18 |
T cell | 1.02e-25 | 25 |
pro-T cell | 1.02e-25 | 25 |
CD4-positive, alpha-beta T cell | 1.37e-18 | 6 |
CD8-positive, alpha-beta T cell | 2.75e-15 | 11 |
lymphoid lineage restricted progenitor cell | 1.66e-11 | 52 |
lymphocyte | 2.95e-11 | 53 |
common lymphoid progenitor | 2.95e-11 | 53 |
naive T cell | 7.13e-10 | 3 |
CD4-positive, alpha-beta thymocyte | 6.24e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.24e-08 | 1 |
mature CD4 single-positive thymocyte | 6.24e-08 | 1 |
resting double-positive thymocyte | 6.24e-08 | 1 |
double-positive blast | 6.24e-08 | 1 |
CD69-positive double-positive thymocyte | 6.24e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.24e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.24e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.24e-08 | 1 |
leukocyte | 3.38e-07 | 136 |
mast cell | 8.58e-07 | 5 |
basophil mast progenitor cell | 8.58e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.22e-16 | 4 |
hemolymphoid system gland | 4.22e-16 | 4 |
thymic region | 4.22e-16 | 4 |
pharyngeal gland | 4.22e-16 | 4 |
thymus primordium | 4.22e-16 | 4 |
pharyngeal epithelium | 6.47e-11 | 6 |
hemopoietic organ | 1.99e-09 | 7 |
immune organ | 1.99e-09 | 7 |
neck | 9.83e-07 | 10 |
gland of gut | 9.83e-07 | 10 |
chordate pharynx | 9.83e-07 | 10 |
pharyngeal region of foregut | 9.83e-07 | 10 |