FFCP PHASE1:Hg19::chr17:27309311..27309327,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124925 | |EntrezGene=124925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15955 | |HGNC=15955 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-254bp_to_uc002hdm.2_5end | |association_with_transcript=-254bp_to_uc002hdm.2_5end | ||
|cluster_id=chr17:27309311..27309327,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_SEZ6_5end | |description=CAGE_peak_4_at_SEZ6_5end | ||
|id=chr17:27309311..27309327,- | |id=chr17:27309311..27309327,- | ||
|ontology_enrichment_celltype=CL:0002057!3.41e-92!42;CL:0000860!1.69e-85!45;CL:0000766!1.77e-79!76;CL:0000738!5.46e-63!140;CL:0002194!1.15e-57!63;CL:0000576!1.15e-57!63;CL:0000040!1.15e-57!63;CL:0000559!1.15e-57!63;CL:0002009!1.15e-55!65;CL:0000839!2.01e-54!70;CL:0000557!1.50e-53!71;CL:0000763!4.40e-51!112;CL:0000049!4.40e-51!112;CL:0000037!2.03e-49!172;CL:0000566!2.03e-49!172;CL:0002087!8.83e-49!119;CL:0000988!3.78e-46!182;CL:0002032!2.41e-45!165;CL:0000837!2.41e-45!165;CL:0002031!1.00e-41!124;CL:0000094!9.92e-31!8;CL:0000081!5.74e-22!11;CL:0000134!2.43e-18!358;CL:0002320!8.73e-18!365;CL:0000219!7.97e-16!390;CL:0000034!1.43e-13!444;CL:0000048!1.77e-13!430;CL:0000723!3.83e-13!436;CL:0000775!7.75e-13!3;CL:0000767!6.17e-12!3;CL:0000623!1.40e-11!3;CL:0000825!1.40e-11!3;CL:0000842!3.64e-11!3;CL:0000771!1.85e-09!2;CL:0000224!1.71e-08!4;CL:0000063!3.17e-07!578;CL:0002371!9.25e-07!591 | |ontology_enrichment_celltype=CL:0002057!3.41e-92!42;CL:0000860!1.69e-85!45;CL:0000766!1.77e-79!76;CL:0000738!5.46e-63!140;CL:0002194!1.15e-57!63;CL:0000576!1.15e-57!63;CL:0000040!1.15e-57!63;CL:0000559!1.15e-57!63;CL:0002009!1.15e-55!65;CL:0000839!2.01e-54!70;CL:0000557!1.50e-53!71;CL:0000763!4.40e-51!112;CL:0000049!4.40e-51!112;CL:0000037!2.03e-49!172;CL:0000566!2.03e-49!172;CL:0002087!8.83e-49!119;CL:0000988!3.78e-46!182;CL:0002032!2.41e-45!165;CL:0000837!2.41e-45!165;CL:0002031!1.00e-41!124;CL:0000094!9.92e-31!8;CL:0000081!5.74e-22!11;CL:0000134!2.43e-18!358;CL:0002320!8.73e-18!365;CL:0000219!7.97e-16!390;CL:0000034!1.43e-13!444;CL:0000048!1.77e-13!430;CL:0000723!3.83e-13!436;CL:0000775!7.75e-13!3;CL:0000767!6.17e-12!3;CL:0000623!1.40e-11!3;CL:0000825!1.40e-11!3;CL:0000842!3.64e-11!3;CL:0000771!1.85e-09!2;CL:0000224!1.71e-08!4;CL:0000063!3.17e-07!578;CL:0002371!9.25e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.24e-101;33!CL:0002057;7.24e-101;33!CL:0000473;3.52e-71;39!CL:0000234;3.52e-71;39!CL:0000576;1.77e-51;48!CL:0000094;5.32e-37;8!CL:0000766;6.62e-36;69!CL:0000081;1.07e-26;11!CL:0000775;2.67e-19;3!CL:0000763;1.66e-16;100!CL:0000771;4.55e-14;2!CL:0002087;1.75e-11;104!CL:0000738;9.98e-11;136!CL:0000767;1.05e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-92,42;CL:0002057,1.71e-92,42;CL:0000766,1.82e-85,72;CL:0000473,2.53e-80,48;CL:0000234,2.53e-80,48;CL:0002194,2.81e-63,59;CL:0000576,2.81e-63,59;CL:0000040,2.81e-63,59;CL:0000559,2.81e-63,59;CL:0002009,4.46e-61,61;CL:0000839,3.77e-56,66;CL:0000763,1.73e-55,108;CL:0000049,1.73e-55,108;CL:0000557,2.99e-55,67;CL:0000738,4.79e-43,136;CL:0000094,2.87e-37,8;CL:0002032,1.46e-35,161;CL:0000837,1.46e-35,161;CL:0000037,7.30e-34,168;CL:0000988,7.14e-32,177;CL:0002087,2.58e-30,115;CL:0002031,7.48e-29,120;CL:0000081,6.84e-27,11;CL:0000775,2.02e-19,3;CL:0000771,4.55e-14,2;CL:0000134,3.64e-13,354;CL:0002320,8.48e-13,361;CL:0000219,1.66e-11,386;CL:0000048,6.38e-10,427;CL:0000723,1.06e-09,433;CL:0000034,2.02e-09,441;CL:0000767,7.91e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-65;42!CL:0000049;2.68e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-46!80;UBERON:0001474!7.25e-43!86;UBERON:0002390!5.24e-42!102;UBERON:0003061!5.24e-42!102;UBERON:0002193!1.68e-37!112;UBERON:0004765!2.51e-35!101;UBERON:0001434!2.51e-35!101;UBERON:0002405!4.73e-30!115;UBERON:0002204!3.48e-18!167;UBERON:0002384!5.01e-17!375;UBERON:0003081!2.64e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.26e-48,76;UBERON:0001474,2.29e-44,82;UBERON:0004765,5.01e-40,90;UBERON:0002405,1.37e-38,93;UBERON:0002390,2.19e-36,98;UBERON:0003061,2.19e-36,98;UBERON:0001434,1.45e-35,100;UBERON:0002193,1.38e-32,108;UBERON:0002204,2.36e-19,167;UBERON:0003081,4.97e-15,203;UBERON:0002384,2.68e-12,371;UBERON:0000926,7.20e-08,315;UBERON:0004120,7.20e-08,315;UBERON:0006603,7.20e-08,315 | |||
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| ||
|short_description=p4@SEZ6 | |short_description=p4@SEZ6 | ||
}} | }} |
Latest revision as of 07:58, 19 September 2015
Short description: | p4@SEZ6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEZ6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -254bp_to_uc002hdm.2_5end |
EntrezGene: | SEZ6 |
HGNC: | 15955 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.26e-48 | 76 |
bone element | 2.29e-44 | 82 |
skeletal element | 5.01e-40 | 90 |
immune system | 1.37e-38 | 93 |
hematopoietic system | 2.19e-36 | 98 |
blood island | 2.19e-36 | 98 |
skeletal system | 1.45e-35 | 100 |
hemolymphoid system | 1.38e-32 | 108 |
musculoskeletal system | 2.36e-19 | 167 |
lateral plate mesoderm | 4.97e-15 | 203 |
connective tissue | 2.68e-12 | 371 |
mesoderm | 7.20e-08 | 315 |
mesoderm-derived structure | 7.20e-08 | 315 |
presumptive mesoderm | 7.20e-08 | 315 |