FFCP PHASE1:Hg19::chr4:95263965..95263976,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27306 | |EntrezGene=27306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17890 | |HGNC=17890 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000514774_5end | |association_with_transcript=39bp_to_ENST00000514774_5end | ||
|cluster_id=chr4:95263965..95263976,- | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_3_at_HPGDS_5end | |description=CAGE_peak_3_at_HPGDS_5end | ||
|id=chr4:95263965..95263976,- | |id=chr4:95263965..95263976,- | ||
|ontology_enrichment_celltype=CL:0002274!1.06e-19!5;CL:0000457!1.06e-19!5;CL:0002191!1.06e-19!5;CL:0000097!1.06e-19!5;CL:0000831!1.06e-19!5;CL:0002028!1.06e-19!5;CL:0000163!9.14e-11!9;CL:0000763!4.57e-09!112;CL:0000049!4.57e-09!112;CL:0001014!7.66e-09!2;CL:0001016!7.66e-09!2 | |ontology_enrichment_celltype=CL:0002274!1.06e-19!5;CL:0000457!1.06e-19!5;CL:0002191!1.06e-19!5;CL:0000097!1.06e-19!5;CL:0000831!1.06e-19!5;CL:0002028!1.06e-19!5;CL:0000163!9.14e-11!9;CL:0000763!4.57e-09!112;CL:0000049!4.57e-09!112;CL:0001014!7.66e-09!2;CL:0001016!7.66e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.61e-72;5!CL:0000163;5.21e-40;9!CL:0001014;1.44e-29;2!CL:0001016;1.44e-29;2!CL:0000453;1.89e-12;5!CL:0000840;1.57e-10;5!CL:0000151;2.65e-09;36!CL:0000990;2.60e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.62e-72,5;CL:0002028,8.62e-72,5;CL:0000163,5.22e-40,9;CL:0001014,1.44e-29,2;CL:0001016,1.44e-29,2;CL:0000453,1.89e-12,5;CL:0000840,1.57e-10,5;CL:0001029,1.57e-10,5;CL:0000151,4.79e-10,36;CL:0000557,6.78e-10,67;CL:0000763,9.49e-10,108;CL:0000049,9.49e-10,108;CL:0000990,2.60e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!4.26e-13!9;UBERON:0007245!4.26e-13!9;UBERON:0010009!4.26e-13!9;UBERON:0010011!4.26e-13!9;UBERON:0000454!4.26e-13!9;UBERON:0002308!6.08e-13!9;UBERON:0000125!6.08e-13!9;UBERON:0009663!6.67e-12!7;UBERON:0001875!4.93e-08!2;UBERON:0006514!4.93e-08!2;UBERON:0007023!8.42e-08!115 | |ontology_enrichment_uberon=UBERON:0002420!4.26e-13!9;UBERON:0007245!4.26e-13!9;UBERON:0010009!4.26e-13!9;UBERON:0010011!4.26e-13!9;UBERON:0000454!4.26e-13!9;UBERON:0002308!6.08e-13!9;UBERON:0000125!6.08e-13!9;UBERON:0009663!6.67e-12!7;UBERON:0001875!4.93e-08!2;UBERON:0006514!4.93e-08!2;UBERON:0007023!8.42e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.13e-08,76;UBERON:0001474,5.25e-08,82;UBERON:0004765,2.98e-07,90;UBERON:0002405,5.31e-07,93 | |||
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| ||
|short_description=p3@HPGDS | |short_description=p3@HPGDS | ||
}} | }} |
Latest revision as of 10:07, 19 September 2015
Short description: | p3@HPGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HPGDS_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 39bp_to_ENST00000514774_5end |
EntrezGene: | HPGDS |
HGNC: | 17890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.62e-72 | 5 |
basophil mast progenitor cell | 8.62e-72 | 5 |
endocrine cell | 5.22e-40 | 9 |
CD1a-positive Langerhans cell | 1.44e-29 | 2 |
immature CD1a-positive Langerhans cell | 1.44e-29 | 2 |
Langerhans cell | 1.89e-12 | 5 |
immature conventional dendritic cell | 1.57e-10 | 5 |
common dendritic progenitor | 1.57e-10 | 5 |
secretory cell | 4.79e-10 | 36 |
granulocyte monocyte progenitor cell | 6.78e-10 | 67 |
myeloid cell | 9.49e-10 | 108 |
common myeloid progenitor | 9.49e-10 | 108 |
conventional dendritic cell | 2.60e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.13e-08 | 76 |
bone element | 5.25e-08 | 82 |
skeletal element | 2.98e-07 | 90 |
immune system | 5.31e-07 | 93 |