FFCP PHASE1:Hg19::chr15:81293254..81293304,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:81293254..81293304,+
|short_description=p1@MESDC1
|description=CAGE_peak_1_at_MESDC1_5end
|association_with_transcript=0bp_to_ENST00000267984,NM_022566,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59274 | |EntrezGene=59274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13519 | |HGNC=13519 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1K6 | |UniProt=Q9H1K6 | ||
|association_with_transcript=0bp_to_ENST00000267984,NM_022566,uc002bfz.2_5end | |||
|cluster_id=chr15:81293254..81293304,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_MESDC1_5end | |||
|id=chr15:81293254..81293304,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.51e-18!42;CL:0000860!7.58e-18!45;CL:0002009!6.15e-12!65;CL:0000557!8.81e-12!71;CL:0002194!2.56e-11!63;CL:0000576!2.56e-11!63;CL:0000040!2.56e-11!63;CL:0000559!2.56e-11!63;CL:0000766!1.94e-10!76;CL:0000839!7.78e-10!70;CL:0000115!1.96e-09!35;CL:0002078!2.25e-09!44;CL:0002139!1.08e-08!24;CL:0000071!3.25e-08!18;CL:0002546!3.25e-08!18;CL:0000213!5.44e-07!57;CL:0000215!5.44e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.69e-18;33!CL:0002057;1.69e-18;33!CL:0000473;4.47e-16;39!CL:0000234;4.47e-16;39!CL:0000576;5.72e-09;48!CL:0002139;9.57e-09;24!CL:0000115;2.47e-08;36!CL:0000071;2.88e-08;18!CL:0002078;2.59e-07;45!CL:0000766;8.73e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.21e-19,48;CL:0000234,5.21e-19,48;CL:0000860,7.51e-18,42;CL:0002057,7.51e-18,42;CL:0002009,1.82e-12,61;CL:0000557,2.94e-12,67;CL:0002194,7.80e-12,59;CL:0000576,7.80e-12,59;CL:0000040,7.80e-12,59;CL:0000559,7.80e-12,59;CL:0000766,7.98e-11,72;CL:0000839,3.17e-10,66;CL:0000115,8.46e-10,36;CL:0002078,1.01e-09,45;CL:0002139,1.08e-08,24;CL:0000071,3.25e-08,18;CL:0002546,3.25e-08,18;CL:0000213,2.77e-07,58;CL:0000215,2.77e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-13;42!CL:0002546;2.88e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.30e-12!216;UBERON:0002371!3.00e-10!80;UBERON:0002405!1.23e-09!115;UBERON:0001474!3.67e-09!86;UBERON:0001986!3.25e-08!18;UBERON:0004638!3.25e-08!18;UBERON:0004852!3.25e-08!18;UBERON:0004765!1.80e-07!101;UBERON:0001434!1.80e-07!101;UBERON:0002193!5.81e-07!112;UBERON:0003914!7.30e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.88e-08;18!UBERON:0001986;2.88e-08;18!UBERON:0004852;2.88e-08;18!UBERON:0006554;6.08e-07;30!UBERON:0001008;6.08e-07;30!UBERON:0006914;7.69e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.05e-11,93;UBERON:0003081,8.15e-11,203;UBERON:0002371,1.35e-10,76;UBERON:0001474,1.96e-09,82;UBERON:0004638,3.25e-08,18;UBERON:0001986,3.25e-08,18;UBERON:0004852,3.25e-08,18;UBERON:0002193,4.23e-07,108;UBERON:0003914,5.26e-07,117;UBERON:0004765,7.27e-07,90 | |||
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| ||
|short_description=p1@MESDC1 | |||
}} | }} |
Latest revision as of 10:12, 19 September 2015
Short description: | p1@MESDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MESDC1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000267984, NM_022566, uc002bfz.2_5end |
EntrezGene: | MESDC1 |
HGNC: | 13519 |
UniProt: | Q9H1K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.21e-19 | 48 |
phagocyte | 5.21e-19 | 48 |
classical monocyte | 7.51e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.51e-18 | 42 |
macrophage dendritic cell progenitor | 1.82e-12 | 61 |
granulocyte monocyte progenitor cell | 2.94e-12 | 67 |
monopoietic cell | 7.80e-12 | 59 |
monocyte | 7.80e-12 | 59 |
monoblast | 7.80e-12 | 59 |
promonocyte | 7.80e-12 | 59 |
myeloid leukocyte | 7.98e-11 | 72 |
myeloid lineage restricted progenitor cell | 3.17e-10 | 66 |
endothelial cell | 8.46e-10 | 36 |
meso-epithelial cell | 1.01e-09 | 45 |
endothelial cell of vascular tree | 1.08e-08 | 24 |
blood vessel endothelial cell | 3.25e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.25e-08 | 18 |
lining cell | 2.77e-07 | 58 |
barrier cell | 2.77e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.05e-11 | 93 |
lateral plate mesoderm | 8.15e-11 | 203 |
bone marrow | 1.35e-10 | 76 |
bone element | 1.96e-09 | 82 |
blood vessel endothelium | 3.25e-08 | 18 |
endothelium | 3.25e-08 | 18 |
cardiovascular system endothelium | 3.25e-08 | 18 |
hemolymphoid system | 4.23e-07 | 108 |
epithelial tube | 5.26e-07 | 117 |
skeletal element | 7.27e-07 | 90 |