FFCP PHASE1:Hg19::chr17:29485994..29486011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4763 | |EntrezGene=4763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7765 | |HGNC=7765 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-71bp_to_ENST00000490416_5end | |association_with_transcript=-71bp_to_ENST00000490416_5end | ||
|cluster_id=chr17:29485994..29486011,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_8_at_NF1_5end | |description=CAGE_peak_8_at_NF1_5end | ||
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|ontology_enrichment_celltype=CL:0000791!1.45e-31!18;CL:0000789!1.45e-31!18;CL:0002420!1.45e-31!18;CL:0002419!1.45e-31!18;CL:0000790!1.45e-31!18;CL:0000084!2.28e-28!25;CL:0000827!2.28e-28!25;CL:0000625!1.75e-20!11;CL:0000838!1.85e-19!52;CL:0000542!6.21e-19!53;CL:0000051!6.21e-19!53;CL:0000738!5.16e-14!140;CL:0002087!1.47e-12!119;CL:0002031!2.59e-12!124;CL:0000624!2.91e-11!6;CL:0000037!3.20e-11!172;CL:0000566!3.20e-11!172;CL:0000988!6.15e-10!182;CL:0002032!2.65e-09!165;CL:0000837!2.65e-09!165;CL:0000623!2.24e-07!3;CL:0000825!2.24e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.45e-31!18;CL:0000789!1.45e-31!18;CL:0002420!1.45e-31!18;CL:0002419!1.45e-31!18;CL:0000790!1.45e-31!18;CL:0000084!2.28e-28!25;CL:0000827!2.28e-28!25;CL:0000625!1.75e-20!11;CL:0000838!1.85e-19!52;CL:0000542!6.21e-19!53;CL:0000051!6.21e-19!53;CL:0000738!5.16e-14!140;CL:0002087!1.47e-12!119;CL:0002031!2.59e-12!124;CL:0000624!2.91e-11!6;CL:0000037!3.20e-11!172;CL:0000566!3.20e-11!172;CL:0000988!6.15e-10!182;CL:0002032!2.65e-09!165;CL:0000837!2.65e-09!165;CL:0000623!2.24e-07!3;CL:0000825!2.24e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.36e-29;18!CL:0000789;1.36e-29;18!CL:0002419;1.36e-29;18!CL:0000625;1.39e-24;11!CL:0000084;8.40e-21;25!CL:0000623;2.30e-18;3!CL:0000815;2.95e-12;2!CL:0000792;2.95e-12;2!CL:0002677;2.95e-12;2!CL:0000624;6.62e-09;6!CL:0000542;1.70e-08;53!CL:0000898;1.86e-08;3!CL:0000226;3.49e-08;3!CL:0000842;3.49e-08;3 | |ontology_enrichment_celltype_v019=CL:0000791;1.36e-29;18!CL:0000789;1.36e-29;18!CL:0002419;1.36e-29;18!CL:0000625;1.39e-24;11!CL:0000084;8.40e-21;25!CL:0000623;2.30e-18;3!CL:0000815;2.95e-12;2!CL:0000792;2.95e-12;2!CL:0002677;2.95e-12;2!CL:0000624;6.62e-09;6!CL:0000542;1.70e-08;53!CL:0000898;1.86e-08;3!CL:0000226;3.49e-08;3!CL:0000842;3.49e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.04e-29,18;CL:0000789,2.04e-29,18;CL:0002420,2.04e-29,18;CL:0002419,2.04e-29,18;CL:0000790,2.04e-29,18;CL:0000625,1.73e-24,11;CL:0000084,1.12e-20,25;CL:0000827,1.12e-20,25;CL:0000623,1.94e-18,3;CL:0000825,1.94e-18,3;CL:0000838,8.68e-16,52;CL:0000542,1.93e-15,53;CL:0000051,1.93e-15,53;CL:0000815,3.13e-12,2;CL:0000792,3.13e-12,2;CL:0002677,3.13e-12,2;CL:0000738,1.98e-09,136;CL:0002087,5.33e-09,115;CL:0000624,8.03e-09,6;CL:0000898,1.93e-08,3;CL:0000226,3.90e-08,3;CL:0000842,3.90e-08,3;CL:0000037,6.03e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.36e-29;18!CL:0000051;1.70e-08;53 | |ontology_enrichment_development_v019=CL:0000790;1.36e-29;18!CL:0000051;1.70e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.59e-08!15;UBERON:0000179!1.59e-08!15;UBERON:0000463!1.59e-08!15;UBERON:0004177!5.33e-08!7;UBERON:0002370!6.65e-07!4;UBERON:0005058!6.65e-07!4;UBERON:0009113!6.65e-07!4;UBERON:0003295!6.65e-07!4;UBERON:0005562!6.65e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!1.59e-08!15;UBERON:0000179!1.59e-08!15;UBERON:0000463!1.59e-08!15;UBERON:0004177!5.33e-08!7;UBERON:0002370!6.65e-07!4;UBERON:0005058!6.65e-07!4;UBERON:0009113!6.65e-07!4;UBERON:0003295!6.65e-07!4;UBERON:0005562!6.65e-07!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@NF1 | |short_description=p8@NF1 | ||
}} | }} |
Latest revision as of 10:52, 19 September 2015
Short description: | p8@NF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -71bp_to_ENST00000490416_5end |
EntrezGene: | NF1 |
HGNC: | 7765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.04e-29 | 18 |
alpha-beta T cell | 2.04e-29 | 18 |
immature T cell | 2.04e-29 | 18 |
mature T cell | 2.04e-29 | 18 |
immature alpha-beta T cell | 2.04e-29 | 18 |
CD8-positive, alpha-beta T cell | 1.73e-24 | 11 |
T cell | 1.12e-20 | 25 |
pro-T cell | 1.12e-20 | 25 |
natural killer cell | 1.94e-18 | 3 |
pro-NK cell | 1.94e-18 | 3 |
lymphoid lineage restricted progenitor cell | 8.68e-16 | 52 |
lymphocyte | 1.93e-15 | 53 |
common lymphoid progenitor | 1.93e-15 | 53 |
regulatory T cell | 3.13e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.13e-12 | 2 |
naive regulatory T cell | 3.13e-12 | 2 |
leukocyte | 1.98e-09 | 136 |
nongranular leukocyte | 5.33e-09 | 115 |
CD4-positive, alpha-beta T cell | 8.03e-09 | 6 |
naive T cell | 1.93e-08 | 3 |
single nucleate cell | 3.90e-08 | 3 |
mononuclear cell | 3.90e-08 | 3 |
hematopoietic stem cell | 6.03e-07 | 168 |