FFCP PHASE1:Hg19::chr3:68053515..68053522,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=407738 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21587 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=61bp_to_uc003dne.2_5end | |||
|cluster_id=chr3:68053515..68053522,+ | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_5_at_FAM19A1_5end | |||
|id=chr3:68053515..68053522,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!5.86e-94!22;UBERON:0001950!2.35e-83!20;UBERON:0000956!1.26e-82!25;UBERON:0000203!1.26e-82!25;UBERON:0001893!5.06e-80!34;UBERON:0001869!5.54e-78!32;UBERON:0002791!3.23e-75!33;UBERON:0002020!5.75e-73!34;UBERON:0003528!5.75e-73!34;UBERON:0001049!4.32e-70!57;UBERON:0005068!4.32e-70!57;UBERON:0006241!4.32e-70!57;UBERON:0007135!4.32e-70!57;UBERON:0002780!7.05e-66!41;UBERON:0001890!7.05e-66!41;UBERON:0006240!7.05e-66!41;UBERON:0003080!3.11e-64!42;UBERON:0002616!1.44e-62!59;UBERON:0001017!2.37e-62!82;UBERON:0000955!7.02e-61!69;UBERON:0006238!7.02e-61!69;UBERON:0005743!3.00e-59!86;UBERON:0000073!3.35e-53!94;UBERON:0001016!3.35e-53!94;UBERON:0003075!2.34e-48!86;UBERON:0007284!2.34e-48!86;UBERON:0002346!5.58e-46!90;UBERON:0003056!4.72e-43!61;UBERON:0000033!1.24e-34!123;UBERON:0000153!8.87e-33!129;UBERON:0007811!8.87e-33!129;UBERON:0007023!2.35e-32!115;UBERON:0002021!3.44e-28!5;UBERON:0001872!4.07e-28!5;UBERON:0004121!2.25e-27!169;UBERON:0000924!1.29e-26!173;UBERON:0006601!1.29e-26!173;UBERON:0001871!2.94e-25!7;UBERON:0000200!3.15e-23!6;UBERON:0000349!2.68e-18!5;UBERON:0002771!1.52e-17!3;UBERON:0000025!7.31e-17!194;UBERON:0000064!4.34e-13!219;UBERON:0004111!1.80e-12!241;UBERON:0001954!2.64e-12!2;UBERON:0003022!2.64e-12!2;UBERON:0002421!2.64e-12!2;UBERON:0002600!2.64e-12!2;UBERON:0002298!3.02e-11!8;UBERON:0000477!1.35e-10!286;UBERON:0000483!2.32e-09!309;UBERON:0000119!3.25e-09!312;UBERON:0003076!4.77e-09!15;UBERON:0003057!4.77e-09!15;UBERON:0000475!1.15e-08!365;UBERON:0000988!1.79e-08!3;UBERON:0001896!3.76e-08!3;UBERON:0005290!3.76e-08!3;UBERON:0010096!3.76e-08!3;UBERON:0004733!1.56e-07!12;UBERON:0002028!1.56e-07!12;UBERON:0007277!1.56e-07!12;UBERON:0007190!4.78e-07!1;UBERON:0002022!5.69e-07!1;UBERON:0004732!5.86e-07!13;UBERON:0002902!7.15e-07!1;UBERON:0009899!7.15e-07!1;UBERON:0003112!7.57e-07!1;UBERON:0000032!7.57e-07!1;UBERON:0005253!7.57e-07!1;UBERON:0003128!7.57e-07!1;UBERON:0002241!7.57e-07!1;UBERON:0001703!7.57e-07!1;UBERON:0004761!7.57e-07!1;UBERON:0009617!7.57e-07!1;UBERON:0002581!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.34e-32;5!UBERON:0001954;5.69e-21;2!UBERON:0003022;5.69e-21;2!UBERON:0002421;5.69e-21;2!UBERON:0002600;5.69e-21;2!UBERON:0002619;3.17e-16;22!UBERON:0000988;1.40e-14;3!UBERON:0000956;1.86e-14;25!UBERON:0000203;1.86e-14;25!UBERON:0002791;2.28e-11;32!UBERON:0001869;2.28e-11;32!UBERON:0003528;4.32e-10;34!UBERON:0002020;4.32e-10;34!UBERON:0000349;3.22e-09;5!UBERON:0002780;4.54e-09;41!UBERON:0001890;4.54e-09;41!UBERON:0001016;8.22e-09;83!UBERON:0001950;1.53e-08;20!UBERON:0000955;2.39e-08;68!UBERON:0001893;3.56e-08;34!UBERON:0002298;5.92e-08;6!UBERON:0000073;1.47e-07;53!UBERON:0002616;1.47e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.74e-32,5;UBERON:0001954,4.66e-21,2;UBERON:0003022,4.66e-21,2;UBERON:0002421,4.66e-21,2;UBERON:0002600,4.66e-21,2;UBERON:0002619,3.17e-16,22;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0000988,1.40e-14,3;UBERON:0000956,1.86e-14,25;UBERON:0000203,1.86e-14,25;UBERON:0001017,1.45e-12,81;UBERON:0000073,2.17e-12,53;UBERON:0002616,2.17e-12,53;UBERON:0001049,8.95e-12,56;UBERON:0005068,8.95e-12,56;UBERON:0006241,8.95e-12,56;UBERON:0007135,8.95e-12,56;UBERON:0002791,1.43e-11,32;UBERON:0001869,1.43e-11,32;UBERON:0001016,2.13e-11,89;UBERON:0003528,5.87e-11,34;UBERON:0002020,5.87e-11,34;UBERON:0001893,5.87e-11,34;UBERON:0002780,2.90e-09,41;UBERON:0001890,2.90e-09,41;UBERON:0003080,2.90e-09,41;UBERON:0006240,2.90e-09,41;UBERON:0000349,2.97e-09,5;UBERON:0001950,1.59e-08,20;UBERON:0003075,2.75e-08,82;UBERON:0007284,2.75e-08,82;UBERON:0002298,5.92e-08,6;UBERON:0002346,6.20e-08,86 | |||
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|short_description=p5@FAM19A1 | |||
}} |
Latest revision as of 11:04, 19 September 2015
Short description: | p5@FAM19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM19A1_5end |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | 61bp_to_uc003dne.2_5end |
EntrezGene: | FAM19A1 |
HGNC: | 21587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.74e-32 | 5 |
Ammon's horn | 4.66e-21 | 2 |
lobe parts of cerebral cortex | 4.66e-21 | 2 |
hippocampal formation | 4.66e-21 | 2 |
limbic lobe | 4.66e-21 | 2 |
regional part of cerebral cortex | 3.17e-16 | 22 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
pons | 1.40e-14 | 3 |
cerebral cortex | 1.86e-14 | 25 |
pallium | 1.86e-14 | 25 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.17e-12 | 53 |
regional part of brain | 2.17e-12 | 53 |
neural tube | 8.95e-12 | 56 |
neural rod | 8.95e-12 | 56 |
future spinal cord | 8.95e-12 | 56 |
neural keel | 8.95e-12 | 56 |
regional part of telencephalon | 1.43e-11 | 32 |
cerebral hemisphere | 1.43e-11 | 32 |
nervous system | 2.13e-11 | 89 |
brain grey matter | 5.87e-11 | 34 |
gray matter | 5.87e-11 | 34 |
telencephalon | 5.87e-11 | 34 |
regional part of forebrain | 2.90e-09 | 41 |
forebrain | 2.90e-09 | 41 |
anterior neural tube | 2.90e-09 | 41 |
future forebrain | 2.90e-09 | 41 |
limbic system | 2.97e-09 | 5 |
neocortex | 1.59e-08 | 20 |
neural plate | 2.75e-08 | 82 |
presumptive neural plate | 2.75e-08 | 82 |
brainstem | 5.92e-08 | 6 |
neurectoderm | 6.20e-08 | 86 |