FFCP PHASE1:Hg19::chr7:73484184..73484197,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=390bp_to_AF086171_5end | |association_with_transcript=390bp_to_AF086171_5end | ||
|cluster_id=chr7:73484184..73484197,+ | |||
|coexpression_cluster_id=C2001 | |coexpression_cluster_id=C2001 | ||
|description=CAGE_peak_19_at_ELN_5end | |description=CAGE_peak_19_at_ELN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002615!6.89e-13!3;CL:0002617!7.69e-09!2 | |ontology_enrichment_celltype=CL:0002615!6.89e-13!3;CL:0002617!7.69e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002579;2.81e-25;3!CL:0002615;4.58e-25;3!CL:0002334;2.95e-14;12!CL:0000136;3.86e-13;13!CL:0000138;4.25e-13;6!CL:0002617;2.72e-10;2!CL:0000153;4.80e-09;9!CL:0000447;4.80e-09;9!CL:0002580;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0002579;2.81e-25;3!CL:0002615;4.58e-25;3!CL:0002334;2.95e-14;12!CL:0000136;3.86e-13;13!CL:0000138;4.25e-13;6!CL:0002617;2.72e-10;2!CL:0000153;4.80e-09;9!CL:0000447;4.80e-09;9!CL:0002580;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.99e-25,3;CL:0002615,6.22e-25,3;CL:0002334,3.15e-14,12;CL:0000058,4.81e-13,6;CL:0000138,4.81e-13,6;CL:0000136,1.96e-11,15;CL:0002617,2.72e-10,2;CL:0000153,5.20e-09,9;CL:0000447,5.20e-09,9;CL:0002580,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.25e-19;1 | |ontology_enrichment_development_v019=UBERON:0004874;3.25e-19;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;3.25e-19;1!DOID:3451;2.72e-10;2!DOID:4159;2.72e-10;2!DOID:0060122;2.72e-10;2 | |ontology_enrichment_disease_v019=DOID:2513;3.25e-19;1!DOID:3451;2.72e-10;2!DOID:4159;2.72e-10;2!DOID:0060122;2.72e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,1.88e-19,1;DOID:3451,2.07e-10,2;DOID:4159,2.07e-10,2;DOID:0060122,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!4.48e-17!6;UBERON:0002358!4.48e-17!6;UBERON:0003684!4.48e-17!6;UBERON:0001178!4.48e-17!6;UBERON:0004457!1.10e-11!12;UBERON:0000042!1.10e-11!12;UBERON:0001443!7.27e-09!11;UBERON:0003127!1.54e-08!2;UBERON:0009569!8.16e-07!113 | |ontology_enrichment_uberon=UBERON:0003688!4.48e-17!6;UBERON:0002358!4.48e-17!6;UBERON:0003684!4.48e-17!6;UBERON:0001178!4.48e-17!6;UBERON:0004457!1.10e-11!12;UBERON:0000042!1.10e-11!12;UBERON:0001443!7.27e-09!11;UBERON:0003127!1.54e-08!2;UBERON:0009569!8.16e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.56e-48;6!UBERON:0002358;1.56e-48;6!UBERON:0003684;1.56e-48;6!UBERON:0001178;1.56e-48;6!UBERON:0004457;1.49e-32;9!UBERON:0000042;1.49e-32;9!UBERON:0000989;3.25e-19;1!UBERON:0008811;3.25e-19;1!UBERON:0003127;2.72e-10;2!UBERON:0000310;4.04e-08;10!UBERON:0001443;1.84e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.56e-48;6!UBERON:0002358;1.56e-48;6!UBERON:0003684;1.56e-48;6!UBERON:0001178;1.56e-48;6!UBERON:0004457;1.49e-32;9!UBERON:0000042;1.49e-32;9!UBERON:0000989;3.25e-19;1!UBERON:0008811;3.25e-19;1!UBERON:0003127;2.72e-10;2!UBERON:0000310;4.04e-08;10!UBERON:0001443;1.84e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.25e-48,6;UBERON:0002358,2.25e-48,6;UBERON:0003684,2.25e-48,6;UBERON:0001178,2.25e-48,6;UBERON:0004457,1.82e-24,12;UBERON:0000042,1.82e-24,12;UBERON:0000989,2.71e-19,1;UBERON:0008811,2.71e-19,1;UBERON:0006258,2.71e-19,1;UBERON:0005876,2.71e-19,1;UBERON:0004874,2.71e-19,1;UBERON:0003127,2.27e-10,2;UBERON:0000310,4.19e-08,10;UBERON:0009569,1.47e-07,112;UBERON:0001443,1.90e-07,11 | |||
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|phase1_expression=1.2717486548939,0.214100523890983,4.65149533516705,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06014813338393,1.00267582127178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.635795703478686,0,0,0,0,0.337552664482532,0.194874010322397,0,0.368199594569197,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,1.07423381301644,0,3.20347873139252,4.60536524160033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.952257725854961,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,1.66330178273007,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p19@ELN | |short_description=p19@ELN | ||
}} | }} |
Latest revision as of 11:14, 19 September 2015
Short description: | p19@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ELN_5end |
Coexpression cluster: | C2001_Chondrocyte_Adipocyte_Preadipocyte_basal_trachea_Fibroblast_Multipotent |
Association with transcript: | 390bp_to_AF086171_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.99e-25 | 3 |
adipocyte of omentum tissue | 6.22e-25 | 3 |
preadipocyte | 3.15e-14 | 12 |
chondroblast | 4.81e-13 | 6 |
chondrocyte | 4.81e-13 | 6 |
fat cell | 1.96e-11 | 15 |
adipocyte of breast | 2.72e-10 | 2 |
GAG secreting cell | 5.20e-09 | 9 |
carbohydrate secreting cell | 5.20e-09 | 9 |
preadipocyte of the breast | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.25e-48 | 6 |
peritoneum | 2.25e-48 | 6 |
abdominal cavity | 2.25e-48 | 6 |
visceral peritoneum | 2.25e-48 | 6 |
cavity lining | 1.82e-24 | 12 |
serous membrane | 1.82e-24 | 12 |
penis | 2.71e-19 | 1 |
intromittent organ | 2.71e-19 | 1 |
lateral plate mesenchyme | 2.71e-19 | 1 |
undifferentiated genital tubercle | 2.71e-19 | 1 |
somatopleure | 2.71e-19 | 1 |
open tracheal system trachea | 2.27e-10 | 2 |
breast | 4.19e-08 | 10 |
subdivision of trunk | 1.47e-07 | 112 |
chest | 1.90e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.88e-19 | 1 |
skin carcinoma | 2.07e-10 | 2 |
skin cancer | 2.07e-10 | 2 |
integumentary system cancer | 2.07e-10 | 2 |